Detail information of GWHGAAZE030858


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007215794.19.1777E-180hypothetical protein PRUPE_ppa009874mg [Prunus persica]
Swissprottr|Q9SKZ2|CAF1G_ARATH3E-161Probable CCR4-associated factor 1 homolog 7
trEMBLtr|M5X642|M5X642_PRUPE3E-180Uncharacterized protein {ECO:0000313|EMBL:EMJ16993.1}
TAIR10AT2G32070.16E-128Polynucleotidyl transferase, ribonuclease H-like superfamily protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene4948522249486031+
GWHAAZE00000009mRNA4948522249486031+
GWHAAZE00000009exon4948522249486031+
GWHAAZE00000009CDS4948522249486031+
Transcript Sequence

Network for GWHGAAZE030858

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF04857.21CAF1151361.30E-12
PF04857.21CAF11592225.20E-06
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K12581CNOT7_8, CAF1, POP2 RNA degradation map03018

Gene Ontology

GO term OntologyName
GO:0003676molecular_functionnucleic acid binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf18.635
SRR3591706second leaf7.016
SRR3591707mature leaf12.098
SRR3591708Shoot apex11.104
SRR3591709Stem20.259
SRR3591710White floral bud54.714
SRR3591711White flower40.207
SRR3591712Green floral bud32.156
SRR3591713Yellow flower44.047
SRP173429 SRR8316895Juvenile bud stage 11.805
SRR8316896Juvenile bud stage 21.539
SRR8316897Juvenile bud stage 8.817
SRR8316894Third green stage 7.659
SRR8316900Third green stage 28.645
SRR8316901Third green stage 26.958
SRR8316898Complete white stage 32.386
SRR8316899Complete white stage 31.576
SRR8316903Complete white stage 42.688
SRR8316902Silver flowering stage29.195
SRR8316904Silver flowering stage41.776
SRR8316905Silver flowering stage19.068
SRR8316906Gold flowering stage 63.048
SRR8316907Gold flowering stage 59.718
SRR8316908Gold flowering stage 63.360
SRP132670SRR6706286Control2.743
SRR6706287Light intensity 50%3.148
SRR6706288Light intensity 20%3.303
CNP0000432CNS0095592Slightly white alabastrum(diploid) 127.273
CNS0095593Slightly white alabastrum(diploid) 225.163
CNS0095594Slightly white alabastrum(diploid) 336.352
CNS0095595Whole white alabastrum(diploid) 243.331
CNS0095596Whole white alabastrum(diploid) 344.766
CNS0095597Whole white alabastrum(diploid) 451.330
CNS0095598Silvery flower (diploied) 129.125
CNS0095599Silvery flower (diploied) 234.656
CNS0095600Silvery flower (diploied) 353.535
CNS0095601Golden flower (diploid) 140.186
CNS0095602Golden flower (diploid) 247.030
CNS0095603Golden flower (diploid) 341.370
CNS0095604Slightly white alabastrum(tetraploid) 132.978
CNS0095605Slightly white alabastrum(tetraploid) 234.595
CNS0095606Slightly white alabastrum(tetraploid) 319.892
CNS0095607Whole white alabastrum(tetraploid) 151.524
CNS0095608Whole white alabastrum(tetraploid) 254.069
CNS0095609Whole white alabastrum(tetraploid) 336.577
CNS0095610Silvery flower (tetraploid) 146.588
CNS0095611Silvery flower (tetraploid) 239.130
CNS0095612Silvery flower (tetraploid) 3114.857
CNS0095613Golden flower (tetraploid) 154.378
CNS0095614Golden flower (tetraploid) 244.208
CNS0095615Golden flower (tetraploid) 339.266
CRA001975CRR073297Stem 18.528
CRR073298Stem 29.782
CRR073299Stem 38.696
CRR073300Leaf 111.739
CRR073301Leaf 29.301
CRR073302Leaf 310.320
CRR073303Juvenile bud 114.213
CRR073304Juvenile bud 214.324
CRR073305Juvenile bud 312.135
CRR073306Third green 133.171
CRR073307Third green 234.480
CRR073308Third green 329.835
CRR073309Second white 187.540
CRR073310Second white 288.670
CRR073311Second white 376.255
CRR073312Silver flowering 191.979
CRR073313Silver flowering 292.624
CRR073314Silver flowering 363.726
CRR073315Gold flowering 117.562
CRR073316Gold flowering 217.814
CRR073317Gold flowering 312.597
CRR073318Tawny withering 114.167
CRR073319Tawny withering 216.107
CRR073320Tawny withering 317.636