Gene detail

Detail information of GWHGAAZE030850

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_011073327.1	0	PREDICTED: CBL-interacting serine/threonine-protein kinase 5-like [Sesamum indicum]
COG	YP_004571825.1	8E-34	serine/threonine protein kinase
Swissprot	tr\|Q9LEU7\|CIPK5_ARATH	0	CBL-interacting serine/threonine-protein kinase 5
trEMBL	tr\|A0A068TPK8\|A0A068TPK8_COFCA	0	Coffea canephora DH200=94 genomic scaffold, scaffold_2 {ECO:0000313\|EMBL:CDO98225.1}
TAIR10	AT5G10930.1	2E-156	CBL-interacting protein kinase 5

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000009	gene	49357020	49358434	+
GWHAAZE00000009	mRNA	49357020	49358434	+
GWHAAZE00000009	exon	49357020	49357371	+
GWHAAZE00000009	exon	49357458	49358434	+
GWHAAZE00000009	CDS	49357020	49357371	+
GWHAAZE00000009	CDS	49357458	49358434	+

Transcript Sequence
>GWHTAAZE030884 ATGGAAGACCAATTCCAATTCCAATCAGATGATCAATACAACCTCATCAATCCTAACCTAATATTCGGAAAGTACGAGATGGGTCGGTTATTAGGCCAAGGTACCTTCGCCAAAGTCTACTACGGCAAAAACATCGCCACTTCCGAAAGCGTCGCAATTAAAGTAATCAACAAAGACCACGTCCTCAAAAAAGAAGGCATGATTGACCAAATCAAGCGTGAAATCTCCGTCATGCGATTGGTTAAACATCCTAACGTCGTCGAATTGAAAGAAGTTATGGCCACTAAACAAAAAATCTTCTTCGTCATGGAATACATCAAAGGCGGCGAACTCTTCTCAAAAGTTGCTAAAGGTAAATTGAAGGAGGAATTAGCAAGGAAGTACTTCCAGCAATTAATCAGCGCCGTCGATTTCTGCCATAGCCGGGGAGTGTCCCACCGGGATCTGAAGCCGGAGAATCTACTCCTCGACGAGAACGAGAATCTAAAGGTCTCCGATTTCGGGTTATCTTCATTGCCTGAGCAGCTCCGGAATGACGGCTTGCTCCATACCCGGTGCGGAACTCCGGCTTATGTGGCACCGGAGGTTTTAAGGAAGAAAGGGTATGATGGGGCAAAAGCCGATTTATGGTCTTGCGGAGTAATTTTGTATGTCTTGCTTGCCGGGTTTCTTCCTTTTCGAGATGAGAATTTAATGAAAATGTATAGCAAGATTTTCAAAGCGGAGTATGAGTTTCCCCCTTGGTTTTCCGGGGAGGCCAAGAGATTGATTTCCAAGTTACTGGTGGCCAATCCCGAGAAGAGGATTTCAATTCCGGCAATAATGAAAGTCCCCTGGTTTCAAAAAGGATTTACAAGACCAATTGCTTTTTCTTCAATAGAGAGTGAAGAAAACAGAGAGATAGAGATTGTAAGGTCAAAATCTTCGCCTCCTTTTTACAATGCATTCGAGTTTATTTCATCGATGTCTTCAGGTTTTGATTTATCTAGTCTTTTCGAGAGTACGAGGAAAATTGGGTCTATGTTCACTTCCAAGTGCTCTGCTCCGGAGATAATGGAGAAGATTGAATCCATCGCGAAGAAACTGAATTTTAAAATTGTGGGTGAGAAGGATTTCAAGGTGAAGATGGAGGGGACAGTGGAGGGACGGAAGGGGAAGTTGGCGGTGATGGCGGAGGTGTTTGAGGTGGCCCCGGAGGTGGCGGTAGTGGAATTTTCAAAGTCGGCCGGAGATACCTTGGAGTATAAGAAATTTTGTGAAGAGGATGTTAGGCCTGCGCTTAAAGATATTGTTTGGAGTTGGCAAGGGGAAAATAACTGTCAGCAATAA

Network for GWHGAAZE030850

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00069.26	Pkinase	25	280	1.20E-74
PF03822.15	NAF	310	366	1.80E-19

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	CAMK_CAMKL-CHK1

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0007165	biological_process	signal transduction
GO:0004672	molecular_function	protein kinase activity
GO:0005524	molecular_function	ATP binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	12.690
	SRR3591706	second leaf	8.551
	SRR3591707	mature leaf	35.005
	SRR3591708	Shoot apex	4.726
	SRR3591709	Stem	21.546
	SRR3591710	White floral bud	21.836
	SRR3591711	White flower	18.900
	SRR3591712	Green floral bud	15.220
	SRR3591713	Yellow flower	13.902
SRP173429	SRR8316895	Juvenile bud stage	4.601
	SRR8316896	Juvenile bud stage	6.803
	SRR8316897	Juvenile bud stage	2.356
	SRR8316894	Third green stage	3.017
	SRR8316900	Third green stage	13.488
	SRR8316901	Third green stage	9.887
	SRR8316898	Complete white stage	9.914
	SRR8316899	Complete white stage	19.356
	SRR8316903	Complete white stage	16.057
	SRR8316902	Silver flowering stage	10.241
	SRR8316904	Silver flowering stage	15.464
	SRR8316905	Silver flowering stage	9.046
	SRR8316906	Gold flowering stage	22.678
	SRR8316907	Gold flowering stage	17.452
	SRR8316908	Gold flowering stage	26.805
SRP132670	SRR6706286	Control	16.854
	SRR6706287	Light intensity 50%	16.509
	SRR6706288	Light intensity 20%	16.939
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	15.431
	CNS0095593	Slightly white alabastrum(diploid) 2	12.379
	CNS0095594	Slightly white alabastrum(diploid) 3	16.657
	CNS0095595	Whole white alabastrum(diploid) 2	16.796
	CNS0095596	Whole white alabastrum(diploid) 3	19.962
	CNS0095597	Whole white alabastrum(diploid) 4	18.200
	CNS0095598	Silvery flower (diploied) 1	11.745
	CNS0095599	Silvery flower (diploied) 2	5.240
	CNS0095600	Silvery flower (diploied) 3	22.118
	CNS0095601	Golden flower (diploid) 1	10.533
	CNS0095602	Golden flower (diploid) 2	19.461
	CNS0095603	Golden flower (diploid) 3	19.170
	CNS0095604	Slightly white alabastrum(tetraploid) 1	20.434
	CNS0095605	Slightly white alabastrum(tetraploid) 2	23.077
	CNS0095606	Slightly white alabastrum(tetraploid) 3	9.338
	CNS0095607	Whole white alabastrum(tetraploid) 1	23.550
	CNS0095608	Whole white alabastrum(tetraploid) 2	22.459
	CNS0095609	Whole white alabastrum(tetraploid) 3	18.506
	CNS0095610	Silvery flower (tetraploid) 1	35.577
	CNS0095611	Silvery flower (tetraploid) 2	43.441
	CNS0095612	Silvery flower (tetraploid) 3	15.977
	CNS0095613	Golden flower (tetraploid) 1	19.530
	CNS0095614	Golden flower (tetraploid) 2	33.530
	CNS0095615	Golden flower (tetraploid) 3	18.385
CRA001975	CRR073297	Stem 1	5.282
	CRR073298	Stem 2	5.401
	CRR073299	Stem 3	6.292
	CRR073300	Leaf 1	6.775
	CRR073301	Leaf 2	6.240
	CRR073302	Leaf 3	6.430
	CRR073303	Juvenile bud 1	9.564
	CRR073304	Juvenile bud 2	5.569
	CRR073305	Juvenile bud 3	9.319
	CRR073306	Third green 1	5.369
	CRR073307	Third green 2	5.850
	CRR073308	Third green 3	7.391
	CRR073309	Second white 1	2.902
	CRR073310	Second white 2	3.341
	CRR073311	Second white 3	2.091
	CRR073312	Silver flowering 1	1.499
	CRR073313	Silver flowering 2	1.999
	CRR073314	Silver flowering 3	3.337
	CRR073315	Gold flowering 1	5.289
	CRR073316	Gold flowering 2	4.882
	CRR073317	Gold flowering 3	7.252
	CRR073318	Tawny withering 1	19.831
	CRR073319	Tawny withering 2	10.614
	CRR073320	Tawny withering 3	27.327