Detail information of GWHGAAZE030824


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrAII25876.10NADPH oxidase A [Camellia sinensis]
COGYP_007146260.16E-73putative ferric reductase
Swissprottr|Q2HXL0|RBOHC_SOLTU0Respiratory burst oxidase homolog protein C
trEMBLtr|A0A076G8S3|A0A076G8S3_CAMSI0NADPH oxidase A {ECO:0000313|EMBL:AII25876.1}
TAIR10AT5G47910.10respiratory burst oxidase homologue D

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene4890983248915278-
GWHAAZE00000009mRNA4890983248915278-
GWHAAZE00000009exon4890983248909941-
GWHAAZE00000009exon4891098548911562-
GWHAAZE00000009exon4891169148911764-
GWHAAZE00000009exon4891187548911977-
GWHAAZE00000009exon4891208248912197-
GWHAAZE00000009exon4891229448912389-
GWHAAZE00000009exon4891247648912862-
GWHAAZE00000009exon4891323948913664-
GWHAAZE00000009exon4891380048913913-
GWHAAZE00000009exon4891413748914185-
GWHAAZE00000009exon4891428948914451-
GWHAAZE00000009exon4891469948915278-
GWHAAZE00000009CDS4891469948915278-
GWHAAZE00000009CDS4891428948914451-
GWHAAZE00000009CDS4891413748914185-
GWHAAZE00000009CDS4891380048913913-
GWHAAZE00000009CDS4891323948913664-
GWHAAZE00000009CDS4891247648912862-
GWHAAZE00000009CDS4891229448912389-
GWHAAZE00000009CDS4891208248912197-
GWHAAZE00000009CDS4891187548911977-
GWHAAZE00000009CDS4891169148911764-
GWHAAZE00000009CDS4891098548911562-
GWHAAZE00000009CDS4890983248909941-
Transcript Sequence

Network for GWHGAAZE030824

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF08414.11NADPH_Ox1392401.90E-37
PF01794.20Ferric_reduct4005574.40E-22
PF08022.13FAD_binding_86007165.90E-34
PF08030.13NAD_binding_67239101.90E-50
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13447RBOH MAPK signaling pathway - plant map04016
Plant-pathogen interactionmap04626

Gene Ontology

GO term OntologyName
GO:0055114biological_processoxidation-reduction process
GO:0016020cellular_componentmembrane
GO:0016491molecular_functionoxidoreductase activity
GO:0005509molecular_functioncalcium ion binding
GO:0004601molecular_functionperoxidase activity
GO:0050664molecular_functionoxidoreductase activity, acting on NAD(P)H, oxygen as acceptor

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf22.221
SRR3591706second leaf22.084
SRR3591707mature leaf27.531
SRR3591708Shoot apex16.286
SRR3591709Stem13.960
SRR3591710White floral bud15.854
SRR3591711White flower11.074
SRR3591712Green floral bud26.822
SRR3591713Yellow flower3.383
SRP173429 SRR8316895Juvenile bud stage 18.852
SRR8316896Juvenile bud stage 24.053
SRR8316897Juvenile bud stage 11.944
SRR8316894Third green stage 13.886
SRR8316900Third green stage 38.049
SRR8316901Third green stage 31.743
SRR8316898Complete white stage 4.445
SRR8316899Complete white stage 45.580
SRR8316903Complete white stage 9.627
SRR8316902Silver flowering stage9.541
SRR8316904Silver flowering stage13.884
SRR8316905Silver flowering stage8.384
SRR8316906Gold flowering stage 25.675
SRR8316907Gold flowering stage 25.405
SRR8316908Gold flowering stage 31.275
SRP132670SRR6706286Control44.193
SRR6706287Light intensity 50%45.395
SRR6706288Light intensity 20%50.097
CNP0000432CNS0095592Slightly white alabastrum(diploid) 112.434
CNS0095593Slightly white alabastrum(diploid) 214.538
CNS0095594Slightly white alabastrum(diploid) 38.455
CNS0095595Whole white alabastrum(diploid) 214.245
CNS0095596Whole white alabastrum(diploid) 39.262
CNS0095597Whole white alabastrum(diploid) 411.249
CNS0095598Silvery flower (diploied) 132.804
CNS0095599Silvery flower (diploied) 218.541
CNS0095600Silvery flower (diploied) 312.955
CNS0095601Golden flower (diploid) 121.834
CNS0095602Golden flower (diploid) 218.588
CNS0095603Golden flower (diploid) 317.831
CNS0095604Slightly white alabastrum(tetraploid) 118.979
CNS0095605Slightly white alabastrum(tetraploid) 212.055
CNS0095606Slightly white alabastrum(tetraploid) 354.774
CNS0095607Whole white alabastrum(tetraploid) 110.516
CNS0095608Whole white alabastrum(tetraploid) 27.750
CNS0095609Whole white alabastrum(tetraploid) 334.514
CNS0095610Silvery flower (tetraploid) 112.836
CNS0095611Silvery flower (tetraploid) 215.962
CNS0095612Silvery flower (tetraploid) 310.273
CNS0095613Golden flower (tetraploid) 14.715
CNS0095614Golden flower (tetraploid) 212.194
CNS0095615Golden flower (tetraploid) 33.351
CRA001975CRR073297Stem 142.066
CRR073298Stem 239.742
CRR073299Stem 332.111
CRR073300Leaf 145.889
CRR073301Leaf 246.764
CRR073302Leaf 334.171
CRR073303Juvenile bud 135.752
CRR073304Juvenile bud 217.881
CRR073305Juvenile bud 342.071
CRR073306Third green 12.592
CRR073307Third green 21.941
CRR073308Third green 33.632
CRR073309Second white 15.762
CRR073310Second white 26.329
CRR073311Second white 36.369
CRR073312Silver flowering 13.397
CRR073313Silver flowering 22.941
CRR073314Silver flowering 31.552
CRR073315Gold flowering 19.763
CRR073316Gold flowering 217.047
CRR073317Gold flowering 315.170
CRR073318Tawny withering 128.503
CRR073319Tawny withering 222.098
CRR073320Tawny withering 327.561