Detail information of GWHGAAZE030797


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrEYU21815.10hypothetical protein MIMGU_mgv1a001429mg [Erythranthe guttata]
COGYP_004281685.19E-11ankyrin
Swissprottr|Q5W7F2|AGD3_ARATH0ADP-ribosylation factor GTPase-activating protein AGD3
trEMBLtr|A0A022Q5K2|A0A022Q5K2_ERYGU0Uncharacterized protein {ECO:0000313|EMBL:EYU21815.1}
TAIR10AT5G13300.10ARF GTPase-activating protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene4860786048618897-
GWHAAZE00000009mRNA4860786048618897-
GWHAAZE00000009exon4860786048608090-
GWHAAZE00000009exon4860915448609415-
GWHAAZE00000009exon4860953048609695-
GWHAAZE00000009exon4861069148610781-
GWHAAZE00000009exon4861085848611027-
GWHAAZE00000009exon4861145148611768-
GWHAAZE00000009exon4861184748611933-
GWHAAZE00000009exon4861256148612788-
GWHAAZE00000009exon4861288348613014-
GWHAAZE00000009exon4861314448613359-
GWHAAZE00000009exon4861393748613978-
GWHAAZE00000009exon4861406248614157-
GWHAAZE00000009exon4861430348614350-
GWHAAZE00000009exon4861447248614537-
GWHAAZE00000009exon4861552948615573-
GWHAAZE00000009exon4861569748615759-
GWHAAZE00000009exon4861645648616526-
GWHAAZE00000009exon4861773248617832-
GWHAAZE00000009exon4861885748618897-
GWHAAZE00000009CDS4861885748618897-
GWHAAZE00000009CDS4861773248617832-
GWHAAZE00000009CDS4861645648616526-
GWHAAZE00000009CDS4861569748615759-
GWHAAZE00000009CDS4861552948615573-
GWHAAZE00000009CDS4861447248614537-
GWHAAZE00000009CDS4861430348614350-
GWHAAZE00000009CDS4861406248614157-
GWHAAZE00000009CDS4861393748613978-
GWHAAZE00000009CDS4861314448613359-
GWHAAZE00000009CDS4861288348613014-
GWHAAZE00000009CDS4861256148612788-
GWHAAZE00000009CDS4861184748611933-
GWHAAZE00000009CDS4861145148611768-
GWHAAZE00000009CDS4861085848611027-
GWHAAZE00000009CDS4861069148610781-
GWHAAZE00000009CDS4860953048609695-
GWHAAZE00000009CDS4860915448609415-
GWHAAZE00000009CDS4860797948608090-
GWHAAZE00000009three_prime_UTR4860786048607978-
Transcript Sequence

Network for GWHGAAZE030797

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF16746.6BAR_3502062.30E-27
PF00169.30PH2674011.20E-12
PF01412.19ArfGap4706144.80E-29
PF13637.7Ank_46957463.60E-10
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K12489ACAP Endocytosis map04144

Gene Ontology

GO term OntologyName
GO:0005515molecular_functionprotein binding
GO:0005096molecular_functionGTPase activator activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf0.121
SRR3591706second leaf0.073
SRR3591707mature leaf0.020
SRR3591708Shoot apex0.101
SRR3591709Stem0.173
SRR3591710White floral bud5.330
SRR3591711White flower0.150
SRR3591712Green floral bud4.688
SRR3591713Yellow flower0.265
SRP173429 SRR8316895Juvenile bud stage 1.591
SRR8316896Juvenile bud stage 6.563
SRR8316897Juvenile bud stage 2.778
SRR8316894Third green stage 2.404
SRR8316900Third green stage 5.273
SRR8316901Third green stage 6.674
SRR8316898Complete white stage 0.000
SRR8316899Complete white stage 0.115
SRR8316903Complete white stage 0.041
SRR8316902Silver flowering stage0.084
SRR8316904Silver flowering stage0.229
SRR8316905Silver flowering stage0.111
SRR8316906Gold flowering stage 0.000
SRR8316907Gold flowering stage 0.092
SRR8316908Gold flowering stage 0.119
SRP132670SRR6706286Control1.706
SRR6706287Light intensity 50%1.765
SRR6706288Light intensity 20%1.345
CNP0000432CNS0095592Slightly white alabastrum(diploid) 17.004
CNS0095593Slightly white alabastrum(diploid) 23.993
CNS0095594Slightly white alabastrum(diploid) 34.906
CNS0095595Whole white alabastrum(diploid) 26.760
CNS0095596Whole white alabastrum(diploid) 38.637
CNS0095597Whole white alabastrum(diploid) 44.928
CNS0095598Silvery flower (diploied) 10.808
CNS0095599Silvery flower (diploied) 20.800
CNS0095600Silvery flower (diploied) 30.199
CNS0095601Golden flower (diploid) 10.407
CNS0095602Golden flower (diploid) 20.249
CNS0095603Golden flower (diploid) 30.221
CNS0095604Slightly white alabastrum(tetraploid) 16.486
CNS0095605Slightly white alabastrum(tetraploid) 24.321
CNS0095606Slightly white alabastrum(tetraploid) 30.048
CNS0095607Whole white alabastrum(tetraploid) 19.545
CNS0095608Whole white alabastrum(tetraploid) 27.022
CNS0095609Whole white alabastrum(tetraploid) 36.642
CNS0095610Silvery flower (tetraploid) 10.298
CNS0095611Silvery flower (tetraploid) 20.174
CNS0095612Silvery flower (tetraploid) 30.693
CNS0095613Golden flower (tetraploid) 10.975
CNS0095614Golden flower (tetraploid) 20.851
CNS0095615Golden flower (tetraploid) 30.393
CRA001975CRR073297Stem 10.875
CRR073298Stem 21.733
CRR073299Stem 30.455
CRR073300Leaf 13.406
CRR073301Leaf 22.350
CRR073302Leaf 30.673
CRR073303Juvenile bud 10.596
CRR073304Juvenile bud 20.799
CRR073305Juvenile bud 30.115
CRR073306Third green 10.358
CRR073307Third green 20.678
CRR073308Third green 30.344
CRR073309Second white 10.000
CRR073310Second white 20.162
CRR073311Second white 30.016
CRR073312Silver flowering 10.436
CRR073313Silver flowering 21.099
CRR073314Silver flowering 30.168
CRR073315Gold flowering 10.449
CRR073316Gold flowering 20.087
CRR073317Gold flowering 30.231
CRR073318Tawny withering 10.277
CRR073319Tawny withering 20.939
CRR073320Tawny withering 30.440