Detail information of GWHGAAZE030714


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002322227.10hypothetical protein POPTR_0015s10310g [Populus trichocarpa]
Swissprottr|Q8S4W7|GAI1_VITVI1E-79DELLA protein GAI1
trEMBLtr|B9IF61|B9IF61_POPTR0Uncharacterized protein {ECO:0000313|EMBL:EEF06354.1}
TAIR10AT1G14920.11E-64GRAS family transcription factor family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene4754379847544925-
GWHAAZE00000009mRNA4754379847544925-
GWHAAZE00000009exon4754379847544925-
GWHAAZE00000009CDS4754379847544925-
Transcript Sequence

Network for GWHGAAZE030714

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03514.15GRAS33741.50E-114
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyGRAS

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf9.538
SRR3591706second leaf0.782
SRR3591707mature leaf0.260
SRR3591708Shoot apex3.088
SRR3591709Stem3.401
SRR3591710White floral bud0.641
SRR3591711White flower0.289
SRR3591712Green floral bud0.752
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 0.269
SRR8316896Juvenile bud stage 0.036
SRR8316897Juvenile bud stage 0.190
SRR8316894Third green stage 0.494
SRR8316900Third green stage 0.312
SRR8316901Third green stage 0.622
SRR8316898Complete white stage 0.275
SRR8316899Complete white stage 3.774
SRR8316903Complete white stage 1.246
SRR8316902Silver flowering stage0.130
SRR8316904Silver flowering stage0.155
SRR8316905Silver flowering stage0.000
SRR8316906Gold flowering stage 0.837
SRR8316907Gold flowering stage 0.012
SRR8316908Gold flowering stage 0.000
SRP132670SRR6706286Control0.541
SRR6706287Light intensity 50%0.338
SRR6706288Light intensity 20%0.795
CNP0000432CNS0095592Slightly white alabastrum(diploid) 10.439
CNS0095593Slightly white alabastrum(diploid) 20.045
CNS0095594Slightly white alabastrum(diploid) 30.311
CNS0095595Whole white alabastrum(diploid) 20.044
CNS0095596Whole white alabastrum(diploid) 30.074
CNS0095597Whole white alabastrum(diploid) 40.000
CNS0095598Silvery flower (diploied) 10.899
CNS0095599Silvery flower (diploied) 20.245
CNS0095600Silvery flower (diploied) 30.141
CNS0095601Golden flower (diploid) 10.162
CNS0095602Golden flower (diploid) 20.162
CNS0095603Golden flower (diploid) 30.130
CNS0095604Slightly white alabastrum(tetraploid) 10.070
CNS0095605Slightly white alabastrum(tetraploid) 20.514
CNS0095606Slightly white alabastrum(tetraploid) 30.539
CNS0095607Whole white alabastrum(tetraploid) 10.419
CNS0095608Whole white alabastrum(tetraploid) 20.186
CNS0095609Whole white alabastrum(tetraploid) 30.169
CNS0095610Silvery flower (tetraploid) 10.085
CNS0095611Silvery flower (tetraploid) 20.000
CNS0095612Silvery flower (tetraploid) 30.000
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.084
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 10.467
CRR073298Stem 20.771
CRR073299Stem 31.196
CRR073300Leaf 12.400
CRR073301Leaf 22.762
CRR073302Leaf 31.248
CRR073303Juvenile bud 13.772
CRR073304Juvenile bud 23.028
CRR073305Juvenile bud 37.186
CRR073306Third green 11.326
CRR073307Third green 22.197
CRR073308Third green 32.392
CRR073309Second white 10.264
CRR073310Second white 20.023
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.325
CRR073317Gold flowering 30.737
CRR073318Tawny withering 10.744
CRR073319Tawny withering 20.000
CRR073320Tawny withering 30.595