Detail information of GWHGAAZE030562


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002280345.10PREDICTED: probable alpha-mannosidase I MNS5 isoform X1 [Vitis vinifera]
Swissprottr|Q9SXC9|MNS5_ARATH0Probable alpha-mannosidase I MNS5
trEMBLtr|D7SHX4|D7SHX4_VITVI0alpha-1,2-Mannosidase {ECO:0000256|RuleBase:RU361193}
TAIR10AT1G27520.10Glycosyl hydrolase family 47 protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene4537271745378583-
GWHAAZE00000009mRNA4537271745378583-
GWHAAZE00000009exon4537271745372947-
GWHAAZE00000009exon4537314845373298-
GWHAAZE00000009exon4537350545373646-
GWHAAZE00000009exon4537400745374107-
GWHAAZE00000009exon4537426545374350-
GWHAAZE00000009exon4537475945374840-
GWHAAZE00000009exon4537498445375104-
GWHAAZE00000009exon4537551045375689-
GWHAAZE00000009exon4537593945375987-
GWHAAZE00000009exon4537624645376428-
GWHAAZE00000009exon4537664445376743-
GWHAAZE00000009exon4537684245376903-
GWHAAZE00000009exon4537698045377045-
GWHAAZE00000009exon4537716245377204-
GWHAAZE00000009exon4537765945377743-
GWHAAZE00000009exon4537806045378076-
GWHAAZE00000009exon4537851945378583-
GWHAAZE00000009CDS4537851945378583-
GWHAAZE00000009CDS4537806045378076-
GWHAAZE00000009CDS4537765945377743-
GWHAAZE00000009CDS4537716245377204-
GWHAAZE00000009CDS4537698045377045-
GWHAAZE00000009CDS4537684245376903-
GWHAAZE00000009CDS4537664445376743-
GWHAAZE00000009CDS4537624645376428-
GWHAAZE00000009CDS4537593945375987-
GWHAAZE00000009CDS4537551045375689-
GWHAAZE00000009CDS4537498445375104-
GWHAAZE00000009CDS4537475945374840-
GWHAAZE00000009CDS4537426545374350-
GWHAAZE00000009CDS4537400745374107-
GWHAAZE00000009CDS4537350545373646-
GWHAAZE00000009CDS4537314845373298-
GWHAAZE00000009CDS4537271745372947-
Transcript Sequence

Network for GWHGAAZE030562

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01532.21Glyco_hydro_47574893.30E-111
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K10084EDEM1 Protein processing in endoplasmic reticulum map04141

Gene Ontology

GO term OntologyName
GO:0016020cellular_componentmembrane
GO:0004571molecular_functionmannosyl-oligosaccharide 1,2-alpha-mannosidase activity
GO:0005509molecular_functioncalcium ion binding
GO:0003824molecular_functioncatalytic activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf14.547
SRR3591706second leaf10.582
SRR3591707mature leaf7.573
SRR3591708Shoot apex10.118
SRR3591709Stem10.905
SRR3591710White floral bud13.005
SRR3591711White flower13.088
SRR3591712Green floral bud9.525
SRR3591713Yellow flower10.929
SRP173429 SRR8316895Juvenile bud stage 5.236
SRR8316896Juvenile bud stage 7.675
SRR8316897Juvenile bud stage 3.087
SRR8316894Third green stage 3.850
SRR8316900Third green stage 8.974
SRR8316901Third green stage 9.341
SRR8316898Complete white stage 7.626
SRR8316899Complete white stage 12.523
SRR8316903Complete white stage 13.738
SRR8316902Silver flowering stage6.055
SRR8316904Silver flowering stage11.163
SRR8316905Silver flowering stage5.014
SRR8316906Gold flowering stage 14.236
SRR8316907Gold flowering stage 13.287
SRR8316908Gold flowering stage 10.210
SRP132670SRR6706286Control8.014
SRR6706287Light intensity 50%8.729
SRR6706288Light intensity 20%8.966
CNP0000432CNS0095592Slightly white alabastrum(diploid) 17.895
CNS0095593Slightly white alabastrum(diploid) 27.601
CNS0095594Slightly white alabastrum(diploid) 37.286
CNS0095595Whole white alabastrum(diploid) 26.919
CNS0095596Whole white alabastrum(diploid) 34.328
CNS0095597Whole white alabastrum(diploid) 45.797
CNS0095598Silvery flower (diploied) 114.322
CNS0095599Silvery flower (diploied) 26.699
CNS0095600Silvery flower (diploied) 39.082
CNS0095601Golden flower (diploid) 17.857
CNS0095602Golden flower (diploid) 28.827
CNS0095603Golden flower (diploid) 37.771
CNS0095604Slightly white alabastrum(tetraploid) 17.300
CNS0095605Slightly white alabastrum(tetraploid) 26.245
CNS0095606Slightly white alabastrum(tetraploid) 38.959
CNS0095607Whole white alabastrum(tetraploid) 15.408
CNS0095608Whole white alabastrum(tetraploid) 23.738
CNS0095609Whole white alabastrum(tetraploid) 36.333
CNS0095610Silvery flower (tetraploid) 18.712
CNS0095611Silvery flower (tetraploid) 26.244
CNS0095612Silvery flower (tetraploid) 37.740
CNS0095613Golden flower (tetraploid) 16.747
CNS0095614Golden flower (tetraploid) 27.703
CNS0095615Golden flower (tetraploid) 38.214
CRA001975CRR073297Stem 18.618
CRR073298Stem 27.959
CRR073299Stem 35.953
CRR073300Leaf 18.470
CRR073301Leaf 210.104
CRR073302Leaf 35.576
CRR073303Juvenile bud 15.426
CRR073304Juvenile bud 25.785
CRR073305Juvenile bud 37.571
CRR073306Third green 18.017
CRR073307Third green 26.022
CRR073308Third green 35.042
CRR073309Second white 13.603
CRR073310Second white 23.752
CRR073311Second white 33.524
CRR073312Silver flowering 12.393
CRR073313Silver flowering 22.923
CRR073314Silver flowering 32.171
CRR073315Gold flowering 15.501
CRR073316Gold flowering 28.333
CRR073317Gold flowering 33.937
CRR073318Tawny withering 19.596
CRR073319Tawny withering 29.733
CRR073320Tawny withering 37.451