Detail information of GWHGAAZE030439


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010261677.15.1603E-142PREDICTED: LAG1 longevity assurance homolog 3-like [Nelumbo nucifera]
Swissprottr|Q6NQI8|LAG13_ARATH2E-138LAG1 longevity assurance homolog 3
trEMBLtr|A0A072TS20|A0A072TS20_MEDTR5E-139LAG1 longevity assurance-like protein {ECO:0000313|EMBL:KEH20212.1}
TAIR10AT1G13580.38E-95LAG1 longevity assurance homolog 3

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene4364973843651211-
GWHAAZE00000009mRNA4364973843651211-
GWHAAZE00000009exon4364973843649933-
GWHAAZE00000009exon4365002743650203-
GWHAAZE00000009exon4365027943650370-
GWHAAZE00000009exon4365047743650573-
GWHAAZE00000009exon4365067843650910-
GWHAAZE00000009exon4365107143651211-
GWHAAZE00000009CDS4365107143651211-
GWHAAZE00000009CDS4365067843650910-
GWHAAZE00000009CDS4365047743650573-
GWHAAZE00000009CDS4365027943650370-
GWHAAZE00000009CDS4365002743650203-
GWHAAZE00000009CDS4364973843649933-
Transcript Sequence

Network for GWHGAAZE030439

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03798.17TRAM_LAG1_CLN8762902.90E-32
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K23727CERS5_6, LASS5_6 Metabolic pathways map01100
Sphingolipid metabolismmap00600
Sphingolipid signaling pathwaymap04071

Gene Ontology

GO term OntologyName
GO:0016021cellular_componentintegral component of membrane

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf18.484
SRR3591706second leaf8.247
SRR3591707mature leaf24.757
SRR3591708Shoot apex9.759
SRR3591709Stem41.192
SRR3591710White floral bud19.617
SRR3591711White flower28.517
SRR3591712Green floral bud12.668
SRR3591713Yellow flower15.383
SRP173429 SRR8316895Juvenile bud stage 16.092
SRR8316896Juvenile bud stage 17.079
SRR8316897Juvenile bud stage 8.239
SRR8316894Third green stage 7.709
SRR8316900Third green stage 13.725
SRR8316901Third green stage 14.998
SRR8316898Complete white stage 6.717
SRR8316899Complete white stage 39.178
SRR8316903Complete white stage 12.055
SRR8316902Silver flowering stage6.244
SRR8316904Silver flowering stage9.758
SRR8316905Silver flowering stage3.658
SRR8316906Gold flowering stage 13.952
SRR8316907Gold flowering stage 13.721
SRR8316908Gold flowering stage 15.823
SRP132670SRR6706286Control8.596
SRR6706287Light intensity 50%7.409
SRR6706288Light intensity 20%7.610
CNP0000432CNS0095592Slightly white alabastrum(diploid) 125.609
CNS0095593Slightly white alabastrum(diploid) 227.068
CNS0095594Slightly white alabastrum(diploid) 321.879
CNS0095595Whole white alabastrum(diploid) 222.825
CNS0095596Whole white alabastrum(diploid) 34.896
CNS0095597Whole white alabastrum(diploid) 416.947
CNS0095598Silvery flower (diploied) 158.079
CNS0095599Silvery flower (diploied) 243.355
CNS0095600Silvery flower (diploied) 319.801
CNS0095601Golden flower (diploid) 161.193
CNS0095602Golden flower (diploid) 237.614
CNS0095603Golden flower (diploid) 339.640
CNS0095604Slightly white alabastrum(tetraploid) 18.032
CNS0095605Slightly white alabastrum(tetraploid) 26.550
CNS0095606Slightly white alabastrum(tetraploid) 321.597
CNS0095607Whole white alabastrum(tetraploid) 16.164
CNS0095608Whole white alabastrum(tetraploid) 22.817
CNS0095609Whole white alabastrum(tetraploid) 34.777
CNS0095610Silvery flower (tetraploid) 17.119
CNS0095611Silvery flower (tetraploid) 211.020
CNS0095612Silvery flower (tetraploid) 34.785
CNS0095613Golden flower (tetraploid) 14.625
CNS0095614Golden flower (tetraploid) 27.624
CNS0095615Golden flower (tetraploid) 32.864
CRA001975CRR073297Stem 19.394
CRR073298Stem 28.117
CRR073299Stem 34.045
CRR073300Leaf 16.807
CRR073301Leaf 27.501
CRR073302Leaf 34.909
CRR073303Juvenile bud 13.172
CRR073304Juvenile bud 21.702
CRR073305Juvenile bud 33.326
CRR073306Third green 10.527
CRR073307Third green 21.107
CRR073308Third green 30.903
CRR073309Second white 10.671
CRR073310Second white 20.496
CRR073311Second white 30.321
CRR073312Silver flowering 10.339
CRR073313Silver flowering 21.835
CRR073314Silver flowering 31.448
CRR073315Gold flowering 123.914
CRR073316Gold flowering 226.169
CRR073317Gold flowering 322.031
CRR073318Tawny withering 150.927
CRR073319Tawny withering 261.892
CRR073320Tawny withering 342.580