Gene detail

Detail information of GWHGAAZE030345

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_007036772.1	0	Tyrosine kinase family protein isoform 1 [Theobroma cacao]
COG	YP_001958461.1	1E-44	hypothetical protein Aasi_1443
Swissprot	tr\|Q9FPR3\|EDR1_ARATH	3E-142	Serine/threonine-protein kinase EDR1
trEMBL	tr\|A0A061FW24\|A0A061FW24_THECC	0	Tyrosine kinase family protein isoform 1 {ECO:0000313\|EMBL:EOY21273.1}
TAIR10	AT1G73660.1	1E-154	protein tyrosine kinase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000009	gene	42090977	42100020	-
GWHAAZE00000009	mRNA	42090977	42100020	-
GWHAAZE00000009	exon	42099333	42100020	-
GWHAAZE00000009	exon	42098274	42098711	-
GWHAAZE00000009	exon	42097648	42097751	-
GWHAAZE00000009	exon	42096090	42097219	-
GWHAAZE00000009	exon	42095738	42095778	-
GWHAAZE00000009	exon	42094765	42094833	-
GWHAAZE00000009	exon	42093858	42093958	-
GWHAAZE00000009	exon	42093684	42093762	-
GWHAAZE00000009	exon	42093502	42093600	-
GWHAAZE00000009	exon	42093339	42093407	-
GWHAAZE00000009	exon	42091766	42091815	-
GWHAAZE00000009	exon	42091324	42091500	-
GWHAAZE00000009	exon	42090977	42091136	-
GWHAAZE00000009	five_prime_UTR	42099813	42100020	-
GWHAAZE00000009	CDS	42099333	42099812	-
GWHAAZE00000009	CDS	42098274	42098711	-
GWHAAZE00000009	CDS	42097648	42097751	-
GWHAAZE00000009	CDS	42096090	42097219	-
GWHAAZE00000009	CDS	42095738	42095778	-
GWHAAZE00000009	CDS	42094765	42094833	-
GWHAAZE00000009	CDS	42093858	42093958	-
GWHAAZE00000009	CDS	42093684	42093762	-
GWHAAZE00000009	CDS	42093502	42093600	-
GWHAAZE00000009	CDS	42093339	42093407	-
GWHAAZE00000009	CDS	42091766	42091815	-
GWHAAZE00000009	CDS	42091324	42091500	-
GWHAAZE00000009	CDS	42090977	42091136	-

Transcript Sequence
>GWHTAAZE030379 ATTTTAGTGGGTGTTGACTGAAATGGTTGTTGCGGTTATTTGATTTCGAGGGCTGGGTTTGATTTGAGTTTCTTGCAGTTGACATAAAGGGTCCTTCTGGTTTTGTATTTGTTAAATTGTTACCGAGAATTCATGTTTGGCCCAAGAAAATGCAAAGCTTTATGCCCAGTTATTTTCTTCTATAACTTACGTAGCTTAGTGAAACAATATGAAGAACATTCTAAAGAAACTTCATATTGTCTCCAATCAATCTGAAGAATTAGAAGGGTCCACGTCATCAAAGGGCAGTAGATTGAGTGAAGTTTCATCACCAAAGAAACTTTCACACGCTCAATCCCAACATAGCTCCGAGGATAATAAGACCCTTTCAGCTCTTTCAGGGTGGTTGAACTCAGTTAATAATCGACGTAGTCATAGCCTTCCATCATCTTCCAATGTGACAAGAGGAAAGAGAATGGAGCCGTCTGATCCTGTGAGCAGTGGCGGTTTGGATACCGTGACCGGAGATTTGGGGTCTGGTAATTCAAGGGATCCCAATGTAGAGGAGGAGTATCAAATAAAATTGGCTTTGGAGTTGAGTGCAAGGGAGGATCCAGAAGCTGTCCAGATTGAAGCTGTTAAGCAGATTAGTTTGGGCTCTTGTCCTAAAGAAAATACCCCAGCAGAAATTGTTGCGTATAGGTATTGGAGTTACAATGCTCTTAGCTACGATGACAAGATCCTTGATGGTTTTTATGACCTATACGGCATCTTGATGGAGTCCACTTCCTCAAAAATGCCATCCCTTGTTGATCTCCAGGGGACGCCAGTGTCAGATAACATCACCTGGGAAGCCGTGCTTGTAAATAAAGCCGCTGATGCTAAACTATCAAGACTTGAACAGAAGGCCCTGGAGATGGCTGTGAAGTCAAGGTCAGAATCCCTAAATGTTGTAAGTAGTGATTTGGTACAAAAGCTTGCTGCTTTAGTTTCTAATCACATGGGAGGCCCGGTTGCGGATCCTTACAACATGTCAATGGCATGGAGAAGTCTTAGTTATAACCTGAAGGCAACTCTCAAGAGCGTGGTTTTGCCTCTTGGTTCTTTGAAAGTTGGATTGGCCCGTCATCGTGCACTGCTGTTCAAGGTTTTGGCTGATAGTATTGGCCTCCCTTGCCGGTTAGTGAAGGGGCAGCAGTATACTGGTTCTGATGCGGTCGCAATGAACTTTGTGAAGATTGATGATGGGAGGGAATACATTGTCGATTTAATGGCCGACCCAGGCACGCTTATTCCATCAGACATGGCCGGATCACATATTGAATACGAAGAATCTCTATTTTCCACAAGCCCTTTGTCCAGGGCCGAAGACTCCTCTCATGCAGCTTCGTCTAGCAGCGGAATCAGTAGCTCATTCGAAGAACACTCCGAATTTGGGACGCTAGAGAAGAGACCCATCTCTGGAAACCCTAATTCTGCTGATGTAACACGGGAGATTAAATCCGAGAAGGGGGCTGAGAAGTTATCAGACAAAAATTCAAGCAACTTAAAAAAGGAGCCAGTTTGGGGAAATCCCAATAGGCATAGTCATCATGCAAGATCACCTTCATGGACCGAAGGTGTTAGCTCCCCAGCCGCACGTAAGATGAAGGTAAAGGACGTTTCGCAATACATGATTGATGCTGCAAAAGAAAACCCGCAGTTAGCTCGGAAACTTCACAATGTGTTACTCGAAAGCGGTGTTGTTGCTCCTCCAAATTTGTTCACTGAAATTTATCAAGAAAAGCCAAATGAAGTACGAGTGGAGGATAATTCCCCAACTAAAGAAAGGTATGAGAACATAAAGAAGAACGACACCCATAAAACTAAGGGTCAATTTTTGCCTCCTTTACCTTCTAAAGGGAGTCCTTGTGAAAAACTGGAGAATCGGTCAGATACAAGTGAATTAACTGGGCAACAAGGTTCATTGAAAAATGCGAGAAATGTTCCTGTAGCGGCCGCAGCTGCTGCCGCTGCTGTTGTTGCATCGTCGATGGTTGTTGCTGCAGCAGCAAAGACAGCTACTGATTCAACAGCCGAACTTCCGGTGGCCGCTGCTGCCGCTGCTGCCACTGCTACGGCTGCAGCAGTGGTTGCAACAAAGGCTACTGTTGGCACACAGTACGAGAACATGGATAATCATGCCGATCCAGCAATAGGTGATGGAGATACAGATGCTGCCATTTGTGAGCATGATGCTTTGGGGGCAAATCCAGAAGGTGAGAGAGGGTCGGATAGATCGACAGGTAATGATAGCACGAAATCTGATGTGTCACTTGACGAGGTTGCTGACTGCGAGATTCCATGGGAGGATATAACCTTGGGCGAGCGTATCGGACTTGGATCATATGGGGAGGTCTATCGTGGAGATTGGCATGGAACTGAAGTTGCAGTCAAGAAGTTCCTAGACCAAGCATTAACTGTTGAATCCCTTGAAGAGTTCAAAAGTGAGGTCCGGATCATGAAAAGAGCTAGGCATCCCAATGTTGTTCTCTTCATGGGGGCTATCACTCGTGCTCCAAATCTTTCCATTGTTACTGAGTTTCTCCCTAGAGGTAGTTTGTACAGATTAATTCACCGGCCCAACAACCAATTAGATGTACGAAGGCGTTTGAGGATGGCCCTTGATGCTGCTCGAGGAATGAATTATTTGCACAACTGCACACCTGTGATAGTTCATCGTGATTTGAAGTCCCCAAATCTTCTTGTTGATAAGAATTGGGTTGTGAAGGTATGCGATTTTGGGTTATCAAGAATGAAGGAAAGCACATTCCTTTCTTCAAGGTCAACTGCGGGGACGGCAGAGTGGATGGCTCCAGAGGTGCTTAGAAATGAGCCTTCAGATGAAAAGTGCGACGTTTATAGTTTTGGAGTCATATTATGGGAACTTTGCACATTGCAGCAACCGTGGGGGGGAATGAACCCAATGCAAGTAGTTGGTGCTGTCGGATTTCAGCACCGCCGTCTTGACATTCCAGACGATGTTGATCCTGCTGTTGGAGATATCATCAAGAAATGCTGGCAGACAGACCCAAGATTACGGCCTTCATTTGCAGAGATAATGGCTGCCCTGAAGCCGCTACAAAAGCCCATTACGACTTCACAAGCGCATAGATCGAGCGGCCATGAGAAGGGTCATCAACAATCACAGACATTAGAAGATCCGACACGTCAGAGGAGCCAGTGA

Network for GWHGAAZE030345

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF14381.7	EDR1	152	355	5.90E-79
PF07714.18	PK_Tyr_Ser-Thr	709	960	2.20E-67

Protein Sequence

>GWHPAAZE030363
MKNILKKLHIVSNQSEELEGSTSSKGSRLSEVSSPKKLSHAQSQHSSEDNKTLSALSGWLNSVNNRRSHSLPSSSNVTRGKRMEPSDPVSSGGLDTVTGDLGSGNSRDPNVEEEYQIKLALELSAREDPEAVQIEAVKQISLGSCPKENTPAEIVAYRYWSYNALSYDDKILDGFYDLYGILMESTSSKMPSLVDLQGTPVSDNITWEAVLVNKAADAKLSRLEQKALEMAVKSRSESLNVVSSDLVQKLAALVSNHMGGPVADPYNMSMAWRSLSYNLKATLKSVVLPLGSLKVGLARHRALLFKVLADSIGLPCRLVKGQQYTGSDAVAMNFVKIDDGREYIVDLMADPGTLIPSDMAGSHIEYEESLFSTSPLSRAEDSSHAASSSSGISSSFEEHSEFGTLEKRPISGNPNSADVTREIKSEKGAEKLSDKNSSNLKKEPVWGNPNRHSHHARSPSWTEGVSSPAARKMKVKDVSQYMIDAAKENPQLARKLHNVLLESGVVAPPNLFTEIYQEKPNEVRVEDNSPTKERYENIKKNDTHKTKGQFLPPLPSKGSPCEKLENRSDTSELTGQQGSLKNARNVPVAAAAAAAAVVASSMVVAAAAKTATDSTAELPVAAAAAAATATAAAVVATKATVGTQYENMDNHADPAIGDGDTDAAICEHDALGANPEGERGSDRSTGNDSTKSDVSLDEVADCEIPWEDITLGERIGLGSYGEVYRGDWHGTEVAVKKFLDQALTVESLEEFKSEVRIMKRARHPNVVLFMGAITRAPNLSIVTEFLPRGSLYRLIHRPNNQLDVRRRLRMALDAARGMNYLHNCTPVIVHRDLKSPNLLVDKNWVVKVCDFGLSRMKESTFLSSRSTAGTAEWMAPEVLRNEPSDEKCDVYSFGVILWELCTLQQPWGGMNPMQVVGAVGFQHRRLDIPDDVDPAVGDIIKKCWQTDPRLRPSFAEIMAALKPLQKPITTSQAHRSSGHEKGHQQSQTLEDPTRQRSQ

Gene family

Gene family	subfamily
Protein Kinases Family	TKL_CTR1-DRK-2

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0004672	molecular_function	protein kinase activity
GO:0005524	molecular_function	ATP binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	23.277
	SRR3591706	second leaf	18.941
	SRR3591707	mature leaf	36.479
	SRR3591708	Shoot apex	20.126
	SRR3591709	Stem	50.705
	SRR3591710	White floral bud	21.775
	SRR3591711	White flower	34.949
	SRR3591712	Green floral bud	16.151
	SRR3591713	Yellow flower	34.289
SRP173429	SRR8316895	Juvenile bud stage	10.420
	SRR8316896	Juvenile bud stage	16.950
	SRR8316897	Juvenile bud stage	9.275
	SRR8316894	Third green stage	5.805
	SRR8316900	Third green stage	13.692
	SRR8316901	Third green stage	13.413
	SRR8316898	Complete white stage	8.272
	SRR8316899	Complete white stage	19.400
	SRR8316903	Complete white stage	18.095
	SRR8316902	Silver flowering stage	16.882
	SRR8316904	Silver flowering stage	24.211
	SRR8316905	Silver flowering stage	12.975
	SRR8316906	Gold flowering stage	40.280
	SRR8316907	Gold flowering stage	43.113
	SRR8316908	Gold flowering stage	53.265
SRP132670	SRR6706286	Control	22.947
	SRR6706287	Light intensity 50%	21.316
	SRR6706288	Light intensity 20%	21.764
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	9.424
	CNS0095593	Slightly white alabastrum(diploid) 2	9.393
	CNS0095594	Slightly white alabastrum(diploid) 3	10.743
	CNS0095595	Whole white alabastrum(diploid) 2	7.264
	CNS0095596	Whole white alabastrum(diploid) 3	6.658
	CNS0095597	Whole white alabastrum(diploid) 4	6.938
	CNS0095598	Silvery flower (diploied) 1	27.159
	CNS0095599	Silvery flower (diploied) 2	16.515
	CNS0095600	Silvery flower (diploied) 3	29.329
	CNS0095601	Golden flower (diploid) 1	20.638
	CNS0095602	Golden flower (diploid) 2	42.730
	CNS0095603	Golden flower (diploid) 3	38.726
	CNS0095604	Slightly white alabastrum(tetraploid) 1	11.930
	CNS0095605	Slightly white alabastrum(tetraploid) 2	11.346
	CNS0095606	Slightly white alabastrum(tetraploid) 3	24.478
	CNS0095607	Whole white alabastrum(tetraploid) 1	7.049
	CNS0095608	Whole white alabastrum(tetraploid) 2	6.222
	CNS0095609	Whole white alabastrum(tetraploid) 3	21.366
	CNS0095610	Silvery flower (tetraploid) 1	36.169
	CNS0095611	Silvery flower (tetraploid) 2	31.707
	CNS0095612	Silvery flower (tetraploid) 3	21.565
	CNS0095613	Golden flower (tetraploid) 1	31.553
	CNS0095614	Golden flower (tetraploid) 2	38.321
	CNS0095615	Golden flower (tetraploid) 3	49.944
CRA001975	CRR073297	Stem 1	16.469
	CRR073298	Stem 2	13.503
	CRR073299	Stem 3	11.266
	CRR073300	Leaf 1	18.206
	CRR073301	Leaf 2	16.060
	CRR073302	Leaf 3	8.940
	CRR073303	Juvenile bud 1	11.949
	CRR073304	Juvenile bud 2	8.496
	CRR073305	Juvenile bud 3	17.593
	CRR073306	Third green 1	10.910
	CRR073307	Third green 2	9.354
	CRR073308	Third green 3	11.584
	CRR073309	Second white 1	4.376
	CRR073310	Second white 2	11.672
	CRR073311	Second white 3	12.750
	CRR073312	Silver flowering 1	9.477
	CRR073313	Silver flowering 2	5.832
	CRR073314	Silver flowering 3	8.360
	CRR073315	Gold flowering 1	14.039
	CRR073316	Gold flowering 2	29.056
	CRR073317	Gold flowering 3	7.806
	CRR073318	Tawny withering 1	22.385
	CRR073319	Tawny withering 2	22.364
	CRR073320	Tawny withering 3	21.528