Gene detail

Detail information of GWHGAAZE030315

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	AEY85028.1	0	putative ATP-binding protein [Camellia sinensis]
COG	YP_005366773.1	2E-16	serine/threonine protein kinase
Swissprot	tr\|P51567\|AFC2_ARATH	3E-45	Serine/threonine-protein kinase AFC2
trEMBL	tr\|H6UJ36\|H6UJ36_CAMSI	0	Putative ATP-binding protein {ECO:0000313\|EMBL:AEY85028.1}
TAIR10	AT1G73460.1	0	Protein kinase superfamily protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000009	gene	41471801	41481043	-
GWHAAZE00000009	mRNA	41471801	41481043	-
GWHAAZE00000009	exon	41471801	41471989	-
GWHAAZE00000009	exon	41472857	41473000	-
GWHAAZE00000009	exon	41473275	41473553	-
GWHAAZE00000009	exon	41473698	41473805	-
GWHAAZE00000009	exon	41475099	41475378	-
GWHAAZE00000009	exon	41475682	41475747	-
GWHAAZE00000009	exon	41476427	41476458	-
GWHAAZE00000009	exon	41476553	41476583	-
GWHAAZE00000009	exon	41477039	41477064	-
GWHAAZE00000009	exon	41477613	41478925	-
GWHAAZE00000009	exon	41479843	41481043	-
GWHAAZE00000009	CDS	41479843	41481043	-
GWHAAZE00000009	CDS	41477613	41478925	-
GWHAAZE00000009	CDS	41477039	41477064	-
GWHAAZE00000009	CDS	41476553	41476583	-
GWHAAZE00000009	CDS	41476427	41476458	-
GWHAAZE00000009	CDS	41475682	41475747	-
GWHAAZE00000009	CDS	41475099	41475378	-
GWHAAZE00000009	CDS	41473698	41473805	-
GWHAAZE00000009	CDS	41473275	41473553	-
GWHAAZE00000009	CDS	41472857	41473000	-
GWHAAZE00000009	CDS	41471801	41471989	-

Transcript Sequence
>GWHTAAZE030349 ATGGCTGACTCAAGCTCCGTTGATGTTATTCTAGAATTTCTGCGAAGAAATAAATTTTCGAGGGCTGAGGCTGCTTTGCGCAGTGAGCTTGGTAACCGTCTTGATTTGAATGGTTTCCTACAAAACCTTACCCTTGAAGAGAAGTCATCTTGCAAATTGTTGGATGAAGCGAATGGGGCAAAACCCGCTGCAGAAAACCCTGGATGGAGTTCTCGAACCAGTAATGAAGTTTCTGAGGAGCTAATTGTCAAAGAGATAGAGTATGGGACCGGGAGAAATGGATCTGAGAGCAAACAGAAGAACACAGTCTCTGTTGTGGAGCGAAATAAACCTACTGAACCCATTGGGACGAGAGATAAGAATTTCTCTTTATCTAATAGTTCAGAGGATACAATACTTGATTTGTATTCGTTGAAGTTCAATCCAAACAATGGGTCAGTTGGTCCCTACCAGAATGATGTTGGCACTACTTCAAACAGCTTTCCAGAGTTTCAGGTTTCTGGGGAGTCGAGGTTTCGTTCAGCTGAGGTAACTGCTGCTGGTAAAGCCAATTTGAAAGTCGAAGATGAACTCAGTTTTGCTGGTGAGAAGAGATTGTCATGGCTTGGAAATACCAGTAAAGCTACTCTGGAAGAGCATAACAGAAATCAAATTAGCAAGCCTACGGAACTTACTCAGCAACATAACATTGTTGGTGCTTATTCTAAACATGATTTTATGGATAACCCGTGGTCTAGATGTGATGAACCCACACATTCATCATCAGAGACTTGGAAAGATTGTCCAGTCAAAACAGTATTTCCGTTCAACAAGGGAGATGTGTCGACCAGTTATGATGGTGCTACCGGTGTAGATGACAAAAAAGAAGGAAAGAAAAATGCTGAGATGAATGACATTAAGGCAGCAATTAAACAGCAAGTGGATGATGTAGGAAGAACTCTATACTTTCGGAAAGCTCAGGGAAGTACCGATCCAAAAATTTTCAATGCCTTAGGTTTTCCACTTGCATCTGAGAATCAGAAAGAAGAGTTACCTAGATTGCCACCTGTTAAACTCAAGTCAGACGACAAGCCATTACATATAAATTGGGAGGAGAAGTTTGACCGTGATGGGCCTGGGTCCAAGATCATCAATGCTGACGGCAACTTCCTTATAGGATCATTTCTGGACGTTCCTATAGGACAAGAAATTAACTCTGCAGGTGGGAAAAGACCAGGAGGAGGTAGTTGGCTATCTGTAAGCCAGGGCATTGCTGAGGACACATCTGATCTTGTTTCTGGTTTTGCAACTATTGGTGATGGATTGGAATCTAATGACTACCCCAATGACTATTGGGACTCTGATGAATATGAAGATGATGATGATGTGGGCTACATGAGACAACCAATTGAAGATGAGACCTGGTTTCTGGCTCATGAAATTGACTACCCAAGTGATAACGAAAAGGGAACAGGGCATGGGAGTGTTCCAGATCTTCAAGAAAGAGGTCCAAACAAAGATGAGGATGATGATCAGTCGTTTGCTGAGGAGGATTCTTATGTATCTGGTGGTGACAGGTATTTTCAGTCAAAGGGTGTCGATCCAGTTACAATTTCAGAGGATCCTATAGGGCTATCGGCAACTGAAATGTATGGGAGACCTGATGAAAATGAGTTAATAGCTCAATATGATGGACAGCTAATGGACGAGGAGGAACTTAATTTGATGCGTGCAGAACCGGTCTGGCAGGGCTTTGTCACTCAGACAAATGAGCTCATCATGTTAGGGGAAGGGAAGGTTCTGGAAGAGTCTGGAAGGCCTCGGCTGGATGATATTTGTGTGGATGATGATCAACACGGTTCAGTTCGATCAATTGGCGTGGGGATCAACAGTGATGCTGCTGATTTTGGTAGCGAGGTGCGGGAAAGTTTGGTTGGAGGTAGTAGTGAGGGGGACTTGGAGTACTTTCATGACCAGGATAAAAAATACCTGGAGAGATCAAAGAGGGAAAAAAGGAGACTGATTACACGCAATTCTGATAAGCATGTAACAGGGAATAGTAAGAGCGGAGTTACAAAGTTGAAAAATCACATGGACGGAGGGTTTTCATTCCCCCCTCCTATAGATGGGGACTTGGTGAAGGAAGGCTCTGCTAAATCTTTGTGGTTGAACAAAGACAATGCTGTTATAAGCAATGACACCTATGATTGTATAAATAATTCGATTGGAAATGATGACATGCTTGCTTCATGGAAGCGCAAAAGCAACGATTCTTCACCTGGCAAGAGTTCAAGGGATGAAGACGACAATGCCAATGCGATAGGATCTACAAATTCCTCCCCCTCAACGTTCTCAAATTATGGTTACACCGAAAGGGAAAAGGAGAGGAAAGAGGAGGAGGATGAGAAAACCGCTCTTGCAAGGGAAGAAGAACCAGGGGCTTCACTGGAGGATGAAGAGGCAGCTGCTGTGCAAGACCAAGTAAAGCAGATCAAGGCTCAGGAGGAGGAGTTTGAAACCTTTAATCTCAAGATTGAGGATATAAAGGCAGGGCACTGGAGGCGAAAAGCTTCAACGCCTATACTGCATAAGGAACAAGGATTCCTCGCAATAGGAAGAGCCAGAAAGAGGAGGGTAATGGGGATGAGGGCATTATTCATGTTTCTTGGACAATGTTTGCATATACTAAGAACTGGCTTTGAGGAAGACAAAAATTTCCATGTCGTTTTAAACTCAGTCATAGCTGGCCGTTATCATGTTACTGAGTATCTTGGATCAGCTGCATTTAGCAAAGCTATTCAAGCTCATGATCTTCACTCTGGCATGGACGTTTGTGTGAAGATTATAAAGAACAACAAAGATTTTTTTGATCAGAGCCTTGATGAGATAAAGCTTCTCAAGTTTGTGAACAAGCATGATCCTGGTGACAAGCATCATCTTCTCCGATTGTATGATTACTTCTATTATCGAGAGCATTTGTTAATAGTATGTGAACTTCTCAAAGCAAACTTATACGAGTTCCATAAATTTAATAGAGAATCAGGTGGAGAAGTCTACTTCACAATGCCAAGACTGCAGTCGATAACTATCCAGTGTCTGGAGGCACTTGAGTTCTTGCATGGTCTGGGCCTTATACATTGTGATCTAAAACCTGAAAATATTTTGGTGAAAAGCTACAGTAGATGTGAAGTGAAGGTGATCGATCTTGGAAGTAGTTGTTTTGAAACAGATCATCTTTGCTCCTATGTTCAATCTAGATCGTATCGTGCACCAGAGGTTATTTTGGGGCTGACTTATGATAAAAAGATTGATATCTGGTCACTTGGTTGCATCTTGGCTGAACTCTGTACTGGCAATGTTCTATTTCAAAATGATTCGCCTGCTACACTACTTGCTCGAGTAATTGGAATTATATGTCCAGTTGACCAAGATATGCTTGCCAAAGGACGTGATACGTACAAATATTTCACCAAGAATCACATGCTTTATGAACGTAATCAGGACACCAACAGGTTGGAGTACCTTATCCCCAAAAAGACGTCCTTGAGGCATCGGTTACCTATGGGGGACCAAGGTTTCATCGACTTTGTGGCTCATCTTCTAGAAATAAATCCAAAGAAGCGCCCTTCTGCATCAGAAGCTTTGAAACACCCGTGGCTATCTTACCCCTATGAACCTATTTCTTCTTAA

Network for GWHGAAZE030315

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00069.26	Pkinase	911	1213	2.20E-49

Protein Sequence

>GWHPAAZE030333
MADSSSVDVILEFLRRNKFSRAEAALRSELGNRLDLNGFLQNLTLEEKSSCKLLDEANGAKPAAENPGWSSRTSNEVSEELIVKEIEYGTGRNGSESKQKNTVSVVERNKPTEPIGTRDKNFSLSNSSEDTILDLYSLKFNPNNGSVGPYQNDVGTTSNSFPEFQVSGESRFRSAEVTAAGKANLKVEDELSFAGEKRLSWLGNTSKATLEEHNRNQISKPTELTQQHNIVGAYSKHDFMDNPWSRCDEPTHSSSETWKDCPVKTVFPFNKGDVSTSYDGATGVDDKKEGKKNAEMNDIKAAIKQQVDDVGRTLYFRKAQGSTDPKIFNALGFPLASENQKEELPRLPPVKLKSDDKPLHINWEEKFDRDGPGSKIINADGNFLIGSFLDVPIGQEINSAGGKRPGGGSWLSVSQGIAEDTSDLVSGFATIGDGLESNDYPNDYWDSDEYEDDDDVGYMRQPIEDETWFLAHEIDYPSDNEKGTGHGSVPDLQERGPNKDEDDDQSFAEEDSYVSGGDRYFQSKGVDPVTISEDPIGLSATEMYGRPDENELIAQYDGQLMDEEELNLMRAEPVWQGFVTQTNELIMLGEGKVLEESGRPRLDDICVDDDQHGSVRSIGVGINSDAADFGSEVRESLVGGSSEGDLEYFHDQDKKYLERSKREKRRLITRNSDKHVTGNSKSGVTKLKNHMDGGFSFPPPIDGDLVKEGSAKSLWLNKDNAVISNDTYDCINNSIGNDDMLASWKRKSNDSSPGKSSRDEDDNANAIGSTNSSPSTFSNYGYTEREKERKEEEDEKTALAREEEPGASLEDEEAAAVQDQVKQIKAQEEEFETFNLKIEDIKAGHWRRKASTPILHKEQGFLAIGRARKRRVMGMRALFMFLGQCLHILRTGFEEDKNFHVVLNSVIAGRYHVTEYLGSAAFSKAIQAHDLHSGMDVCVKIIKNNKDFFDQSLDEIKLLKFVNKHDPGDKHHLLRLYDYFYYREHLLIVCELLKANLYEFHKFNRESGGEVYFTMPRLQSITIQCLEALEFLHGLGLIHCDLKPENILVKSYSRCEVKVIDLGSSCFETDHLCSYVQSRSYRAPEVILGLTYDKKIDIWSLGCILAELCTGNVLFQNDSPATLLARVIGIICPVDQDMLAKGRDTYKYFTKNHMLYERNQDTNRLEYLIPKKTSLRHRLPMGDQGFIDFVAHLLEINPKKRPSASEALKHPWLSYPYEPISS

Gene family

Gene family	subfamily
Protein Kinases Family	CMGC_DYRK-PRP4

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0004672	molecular_function	protein kinase activity
GO:0005524	molecular_function	ATP binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	20.841
	SRR3591706	second leaf	15.489
	SRR3591707	mature leaf	12.936
	SRR3591708	Shoot apex	25.183
	SRR3591709	Stem	16.778
	SRR3591710	White floral bud	20.193
	SRR3591711	White flower	17.905
	SRR3591712	Green floral bud	20.061
	SRR3591713	Yellow flower	14.056
SRP173429	SRR8316895	Juvenile bud stage	11.295
	SRR8316896	Juvenile bud stage	14.702
	SRR8316897	Juvenile bud stage	7.270
	SRR8316894	Third green stage	6.678
	SRR8316900	Third green stage	16.211
	SRR8316901	Third green stage	15.132
	SRR8316898	Complete white stage	5.802
	SRR8316899	Complete white stage	19.176
	SRR8316903	Complete white stage	11.314
	SRR8316902	Silver flowering stage	5.305
	SRR8316904	Silver flowering stage	9.805
	SRR8316905	Silver flowering stage	5.082
	SRR8316906	Gold flowering stage	15.568
	SRR8316907	Gold flowering stage	13.175
	SRR8316908	Gold flowering stage	15.391
SRP132670	SRR6706286	Control	12.293
	SRR6706287	Light intensity 50%	12.839
	SRR6706288	Light intensity 20%	13.154
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	7.514
	CNS0095593	Slightly white alabastrum(diploid) 2	8.670
	CNS0095594	Slightly white alabastrum(diploid) 3	7.059
	CNS0095595	Whole white alabastrum(diploid) 2	7.726
	CNS0095596	Whole white alabastrum(diploid) 3	6.748
	CNS0095597	Whole white alabastrum(diploid) 4	7.342
	CNS0095598	Silvery flower (diploied) 1	10.037
	CNS0095599	Silvery flower (diploied) 2	10.075
	CNS0095600	Silvery flower (diploied) 3	16.753
	CNS0095601	Golden flower (diploid) 1	10.398
	CNS0095602	Golden flower (diploid) 2	17.820
	CNS0095603	Golden flower (diploid) 3	17.031
	CNS0095604	Slightly white alabastrum(tetraploid) 1	11.342
	CNS0095605	Slightly white alabastrum(tetraploid) 2	7.388
	CNS0095606	Slightly white alabastrum(tetraploid) 3	27.429
	CNS0095607	Whole white alabastrum(tetraploid) 1	7.854
	CNS0095608	Whole white alabastrum(tetraploid) 2	7.588
	CNS0095609	Whole white alabastrum(tetraploid) 3	16.040
	CNS0095610	Silvery flower (tetraploid) 1	15.633
	CNS0095611	Silvery flower (tetraploid) 2	16.136
	CNS0095612	Silvery flower (tetraploid) 3	16.625
	CNS0095613	Golden flower (tetraploid) 1	8.094
	CNS0095614	Golden flower (tetraploid) 2	13.854
	CNS0095615	Golden flower (tetraploid) 3	17.074
CRA001975	CRR073297	Stem 1	17.384
	CRR073298	Stem 2	14.739
	CRR073299	Stem 3	12.806
	CRR073300	Leaf 1	15.572
	CRR073301	Leaf 2	12.154
	CRR073302	Leaf 3	10.286
	CRR073303	Juvenile bud 1	10.564
	CRR073304	Juvenile bud 2	9.599
	CRR073305	Juvenile bud 3	13.872
	CRR073306	Third green 1	7.125
	CRR073307	Third green 2	5.132
	CRR073308	Third green 3	6.786
	CRR073309	Second white 1	7.633
	CRR073310	Second white 2	9.645
	CRR073311	Second white 3	12.113
	CRR073312	Silver flowering 1	9.634
	CRR073313	Silver flowering 2	7.926
	CRR073314	Silver flowering 3	7.771
	CRR073315	Gold flowering 1	6.820
	CRR073316	Gold flowering 2	11.422
	CRR073317	Gold flowering 3	9.533
	CRR073318	Tawny withering 1	12.037
	CRR073319	Tawny withering 2	8.179
	CRR073320	Tawny withering 3	12.782