Detail information of GWHGAAZE030181


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_011046499.10PREDICTED: auxin transporter-like protein 5 [Populus euphratica]
Swissprottr|Q8L883|LAX5_MEDTR0Auxin transporter-like protein 5
trEMBLtr|A9PAI6|A9PAI6_POPTR0Auxin influx carrier family protein {ECO:0000313|EMBL:EEE86928.1}
TAIR10AT2G21050.10like AUXIN RESISTANT 2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene3913587139140644-
GWHAAZE00000009mRNA3913587139140644-
GWHAAZE00000009exon3914041039140644-
GWHAAZE00000009exon3914012839140313-
GWHAAZE00000009exon3913987939139991-
GWHAAZE00000009exon3913936839139551-
GWHAAZE00000009exon3913861039138707-
GWHAAZE00000009exon3913738139137613-
GWHAAZE00000009exon3913622739136489-
GWHAAZE00000009exon3913587139136137-
GWHAAZE00000009five_prime_UTR3914056639140644-
GWHAAZE00000009CDS3914041039140565-
GWHAAZE00000009CDS3914012839140313-
GWHAAZE00000009CDS3913987939139991-
GWHAAZE00000009CDS3913936839139551-
GWHAAZE00000009CDS3913861039138707-
GWHAAZE00000009CDS3913738139137613-
GWHAAZE00000009CDS3913622739136489-
GWHAAZE00000009CDS3913587139136137-
Transcript Sequence

Network for GWHGAAZE030181

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01490.19Aa_trans374182.90E-67
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K13946AUX1, LAX Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf19.696
SRR3591706second leaf8.299
SRR3591707mature leaf0.727
SRR3591708Shoot apex51.536
SRR3591709Stem34.090
SRR3591710White floral bud2.298
SRR3591711White flower1.329
SRR3591712Green floral bud1.727
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 3.111
SRR8316896Juvenile bud stage 3.220
SRR8316897Juvenile bud stage 0.709
SRR8316894Third green stage 0.723
SRR8316900Third green stage 0.216
SRR8316901Third green stage 0.695
SRR8316898Complete white stage 0.149
SRR8316899Complete white stage 1.274
SRR8316903Complete white stage 0.794
SRR8316902Silver flowering stage0.170
SRR8316904Silver flowering stage0.197
SRR8316905Silver flowering stage0.098
SRR8316906Gold flowering stage 0.530
SRR8316907Gold flowering stage 0.240
SRR8316908Gold flowering stage 0.621
SRP132670SRR6706286Control0.815
SRR6706287Light intensity 50%0.587
SRR6706288Light intensity 20%0.722
CNP0000432CNS0095592Slightly white alabastrum(diploid) 13.925
CNS0095593Slightly white alabastrum(diploid) 22.628
CNS0095594Slightly white alabastrum(diploid) 34.120
CNS0095595Whole white alabastrum(diploid) 21.618
CNS0095596Whole white alabastrum(diploid) 30.305
CNS0095597Whole white alabastrum(diploid) 41.410
CNS0095598Silvery flower (diploied) 11.756
CNS0095599Silvery flower (diploied) 22.107
CNS0095600Silvery flower (diploied) 31.415
CNS0095601Golden flower (diploid) 11.150
CNS0095602Golden flower (diploid) 21.909
CNS0095603Golden flower (diploid) 31.526
CNS0095604Slightly white alabastrum(tetraploid) 13.065
CNS0095605Slightly white alabastrum(tetraploid) 21.764
CNS0095606Slightly white alabastrum(tetraploid) 311.483
CNS0095607Whole white alabastrum(tetraploid) 14.246
CNS0095608Whole white alabastrum(tetraploid) 20.917
CNS0095609Whole white alabastrum(tetraploid) 32.260
CNS0095610Silvery flower (tetraploid) 10.446
CNS0095611Silvery flower (tetraploid) 20.800
CNS0095612Silvery flower (tetraploid) 30.588
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.112
CNS0095615Golden flower (tetraploid) 30.000
CRA001975CRR073297Stem 18.470
CRR073298Stem 27.958
CRR073299Stem 316.581
CRR073300Leaf 11.202
CRR073301Leaf 21.286
CRR073302Leaf 32.178
CRR073303Juvenile bud 10.482
CRR073304Juvenile bud 21.850
CRR073305Juvenile bud 30.684
CRR073306Third green 11.258
CRR073307Third green 21.232
CRR073308Third green 31.217
CRR073309Second white 10.029
CRR073310Second white 20.029
CRR073311Second white 30.300
CRR073312Silver flowering 10.043
CRR073313Silver flowering 20.092
CRR073314Silver flowering 30.000
CRR073315Gold flowering 11.459
CRR073316Gold flowering 23.968
CRR073317Gold flowering 34.797
CRR073318Tawny withering 135.318
CRR073319Tawny withering 222.605
CRR073320Tawny withering 337.474