Detail information of GWHGAAZE030154


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002312994.12.95798E-43auxin-responsive family protein [Populus trichocarpa]
Swissprottr|P33081|AX15A_SOYBN5E-34Auxin-induced protein 15A
trEMBLtr|B9HRD2|B9HRD2_POPTR1E-43Auxin-responsive family protein {ECO:0000313|EMBL:EEE86949.1}
TAIR10AT4G38840.11E-30SAUR-like auxin-responsive protein family

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene3880595638806234-
GWHAAZE00000009mRNA3880595638806234-
GWHAAZE00000009exon3880595638806234-
GWHAAZE00000009CDS3880595638806234-
Transcript Sequence

Network for GWHGAAZE030154

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02519.15Auxin_inducible17872.60E-24
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14488SAUR Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName
GO:0009733biological_processresponse to auxin

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf12.850
SRR3591706second leaf22.767
SRR3591707mature leaf9.588
SRR3591708Shoot apex4.136
SRR3591709Stem2.055
SRR3591710White floral bud11.264
SRR3591711White flower2.974
SRR3591712Green floral bud5.784
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 0.546
SRR8316896Juvenile bud stage 2.717
SRR8316897Juvenile bud stage 0.465
SRR8316894Third green stage 0.267
SRR8316900Third green stage 1.933
SRR8316901Third green stage 0.761
SRR8316898Complete white stage 2.478
SRR8316899Complete white stage 2.568
SRR8316903Complete white stage 3.388
SRR8316902Silver flowering stage4.932
SRR8316904Silver flowering stage3.587
SRR8316905Silver flowering stage3.795
SRR8316906Gold flowering stage 2.609
SRR8316907Gold flowering stage 2.209
SRR8316908Gold flowering stage 1.650
SRP132670SRR6706286Control0.182
SRR6706287Light intensity 50%0.138
SRR6706288Light intensity 20%0.253
CNP0000432CNS0095592Slightly white alabastrum(diploid) 13.002
CNS0095593Slightly white alabastrum(diploid) 21.293
CNS0095594Slightly white alabastrum(diploid) 30.788
CNS0095595Whole white alabastrum(diploid) 23.000
CNS0095596Whole white alabastrum(diploid) 32.344
CNS0095597Whole white alabastrum(diploid) 43.519
CNS0095598Silvery flower (diploied) 13.367
CNS0095599Silvery flower (diploied) 20.919
CNS0095600Silvery flower (diploied) 33.582
CNS0095601Golden flower (diploid) 11.005
CNS0095602Golden flower (diploid) 20.156
CNS0095603Golden flower (diploid) 30.416
CNS0095604Slightly white alabastrum(tetraploid) 14.085
CNS0095605Slightly white alabastrum(tetraploid) 23.525
CNS0095606Slightly white alabastrum(tetraploid) 37.137
CNS0095607Whole white alabastrum(tetraploid) 12.683
CNS0095608Whole white alabastrum(tetraploid) 25.255
CNS0095609Whole white alabastrum(tetraploid) 32.395
CNS0095610Silvery flower (tetraploid) 11.176
CNS0095611Silvery flower (tetraploid) 21.220
CNS0095612Silvery flower (tetraploid) 30.387
CNS0095613Golden flower (tetraploid) 10.061
CNS0095614Golden flower (tetraploid) 20.506
CNS0095615Golden flower (tetraploid) 30.567
CRA001975CRR073297Stem 10.929
CRR073298Stem 21.539
CRR073299Stem 30.446
CRR073300Leaf 10.975
CRR073301Leaf 20.703
CRR073302Leaf 30.772
CRR073303Juvenile bud 10.019
CRR073304Juvenile bud 20.000
CRR073305Juvenile bud 30.256
CRR073306Third green 13.278
CRR073307Third green 24.382
CRR073308Third green 33.523
CRR073309Second white 10.000
CRR073310Second white 21.325
CRR073311Second white 30.000
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 13.431
CRR073316Gold flowering 20.268
CRR073317Gold flowering 33.906
CRR073318Tawny withering 10.000
CRR073319Tawny withering 20.000
CRR073320Tawny withering 30.000