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Detail information of GWHGAAZE030152
Functional Annotation
Database
Orthologs
E value
Annotation
Nr
XP_002276347.1
1.5765E-43
PREDICTED: auxin-induced protein 15A-like [Vitis vinifera]
Swissprot
tr|P33082|AXX15_SOYBN
2E-31
Auxin-induced protein X15
trEMBL
tr|F6I162|F6I162_VITVI
6E-44
Putative uncharacterized protein {ECO:0000313|EMBL:CCB60678.1}
TAIR10
AT4G38840.1
3E-26
SAUR-like auxin-responsive protein family
Location And Transcript Sequence
(JBrowse)
Scaffold
Type
Start
End
Strand
GWHAAZE00000009
gene
38796565
38796852
-
GWHAAZE00000009
mRNA
38796565
38796852
-
GWHAAZE00000009
exon
38796565
38796852
-
GWHAAZE00000009
CDS
38796565
38796852
-
Transcript Sequence
>GWHTAAZE030186 ATGGGTATCAGGTTGCCAGGAATTGTTCATGCTAAGCAGATTGTTCAACGAATTTTTTCAACTCCAACAGCTACAAATGTACCCAAAGGCCACTTTGCTGTTTATGTTGGAGAAACCGAAATGAAGCGACATGTAATTCCATTATCATATTTGGACCATCCTTCATTCCAAGAGTTGCTAAGCAAGGCTGAAGATACATTTGGGTTTGATCATCCTATGGGTGGTCTCACAATTCCGTGCAGAGAAGAAGCATTCGCTAATCTCACTCACAGTTTGAATTGCTCTTGA
Network for GWHGAAZE030152
Network category
Network
Top300 PCC genelist
Coexpression Positive
Network
Top300 PCC genelist
Coexpression Negative
Network
Top300 PCC genelist
Functional Module
Module ID
Function Annotation
Protein Structure
Pfam accession
Pfam name
Alignment start
Alignment end
E-value
PF02519.15
Auxin_inducible
21
91
4.50E-24
Protein Sequence
>GWHPAAZE030170 MGIRLPGIVHAKQIVQRIFSTPTATNVPKGHFAVYVGETEMKRHVIPLSYLDHPSFQELLSKAEDTFGFDHPMGGLTIPCREEAFANLTHSLNCS
Gene family
Gene family
subfamily
--
--
KEGG pathway
KO
Enzyme
pathway
mapID
K14488
SAUR
Plant hormone signal transduction
map04075
Gene Ontology
GO term
Ontology
Name
GO:0009733
biological_process
response to auxin
Expression pattern
Expression pattern detail
SRP
Sample
Description
TPM
SRP075780
SRR3591705
youngest leaf
7.793
SRR3591706
second leaf
4.387
SRR3591707
mature leaf
0.446
SRR3591708
Shoot apex
1.588
SRR3591709
Stem
4.343
SRR3591710
White floral bud
4.113
SRR3591711
White flower
1.959
SRR3591712
Green floral bud
3.163
SRR3591713
Yellow flower
0.000
SRP173429
SRR8316895
Juvenile bud stage
0.000
SRR8316896
Juvenile bud stage
0.000
SRR8316897
Juvenile bud stage
0.000
SRR8316894
Third green stage
0.000
SRR8316900
Third green stage
2.422
SRR8316901
Third green stage
2.173
SRR8316898
Complete white stage
1.619
SRR8316899
Complete white stage
1.028
SRR8316903
Complete white stage
3.843
SRR8316902
Silver flowering stage
4.866
SRR8316904
Silver flowering stage
4.628
SRR8316905
Silver flowering stage
3.265
SRR8316906
Gold flowering stage
3.040
SRR8316907
Gold flowering stage
2.914
SRR8316908
Gold flowering stage
0.371
SRP132670
SRR6706286
Control
0.107
SRR6706287
Light intensity 50%
0.251
SRR6706288
Light intensity 20%
0.091
CNP0000432
CNS0095592
Slightly white alabastrum(diploid) 1
0.133
CNS0095593
Slightly white alabastrum(diploid) 2
1.763
CNS0095594
Slightly white alabastrum(diploid) 3
0.191
CNS0095595
Whole white alabastrum(diploid) 2
3.021
CNS0095596
Whole white alabastrum(diploid) 3
3.512
CNS0095597
Whole white alabastrum(diploid) 4
0.996
CNS0095598
Silvery flower (diploied) 1
0.000
CNS0095599
Silvery flower (diploied) 2
0.148
CNS0095600
Silvery flower (diploied) 3
0.999
CNS0095601
Golden flower (diploid) 1
0.562
CNS0095602
Golden flower (diploid) 2
0.000
CNS0095603
Golden flower (diploid) 3
0.097
CNS0095604
Slightly white alabastrum(tetraploid) 1
3.664
CNS0095605
Slightly white alabastrum(tetraploid) 2
2.912
CNS0095606
Slightly white alabastrum(tetraploid) 3
5.071
CNS0095607
Whole white alabastrum(tetraploid) 1
1.974
CNS0095608
Whole white alabastrum(tetraploid) 2
2.793
CNS0095609
Whole white alabastrum(tetraploid) 3
1.974
CNS0095610
Silvery flower (tetraploid) 1
0.868
CNS0095611
Silvery flower (tetraploid) 2
1.289
CNS0095612
Silvery flower (tetraploid) 3
1.028
CNS0095613
Golden flower (tetraploid) 1
0.000
CNS0095614
Golden flower (tetraploid) 2
0.000
CNS0095615
Golden flower (tetraploid) 3
0.381
CRA001975
CRR073297
Stem 1
0.000
CRR073298
Stem 2
0.000
CRR073299
Stem 3
0.465
CRR073300
Leaf 1
0.026
CRR073301
Leaf 2
0.000
CRR073302
Leaf 3
0.273
CRR073303
Juvenile bud 1
0.251
CRR073304
Juvenile bud 2
0.777
CRR073305
Juvenile bud 3
0.149
CRR073306
Third green 1
1.825
CRR073307
Third green 2
2.727
CRR073308
Third green 3
1.165
CRR073309
Second white 1
0.030
CRR073310
Second white 2
0.411
CRR073311
Second white 3
0.000
CRR073312
Silver flowering 1
0.000
CRR073313
Silver flowering 2
0.000
CRR073314
Silver flowering 3
0.000
CRR073315
Gold flowering 1
0.000
CRR073316
Gold flowering 2
0.000
CRR073317
Gold flowering 3
0.000
CRR073318
Tawny withering 1
0.000
CRR073319
Tawny withering 2
0.000
CRR073320
Tawny withering 3
0.324