Detail information of GWHGAAZE030150


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002312994.12.69697E-41auxin-responsive family protein [Populus trichocarpa]
Swissprottr|P32295|ARG7_VIGRR6E-35Indole-3-acetic acid-induced protein ARG7
trEMBLtr|B9HRD2|B9HRD2_POPTR1E-41Auxin-responsive family protein {ECO:0000313|EMBL:EEE86949.1}
TAIR10AT4G38840.19E-29SAUR-like auxin-responsive protein family

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene3879071238790993+
GWHAAZE00000009mRNA3879071238790993+
GWHAAZE00000009exon3879071238790993+
GWHAAZE00000009CDS3879071238790993+
Transcript Sequence

Network for GWHGAAZE030150

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0161GO:0009733 response to auxin GOslim:biological_process
map04075 Plant hormone signal transduction


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02519.15Auxin_inducible17908.80E-26
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14488SAUR Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName
GO:0009733biological_processresponse to auxin

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf12.072
SRR3591706second leaf10.577
SRR3591707mature leaf0.945
SRR3591708Shoot apex3.948
SRR3591709Stem6.078
SRR3591710White floral bud19.137
SRR3591711White flower6.059
SRR3591712Green floral bud27.455
SRR3591713Yellow flower0.000
SRP173429 SRR8316895Juvenile bud stage 6.753
SRR8316896Juvenile bud stage 21.045
SRR8316897Juvenile bud stage 9.094
SRR8316894Third green stage 11.565
SRR8316900Third green stage 40.665
SRR8316901Third green stage 43.565
SRR8316898Complete white stage 28.249
SRR8316899Complete white stage 58.093
SRR8316903Complete white stage 44.377
SRR8316902Silver flowering stage15.249
SRR8316904Silver flowering stage18.313
SRR8316905Silver flowering stage12.728
SRR8316906Gold flowering stage 12.401
SRR8316907Gold flowering stage 8.751
SRR8316908Gold flowering stage 8.812
SRP132670SRR6706286Control8.212
SRR6706287Light intensity 50%8.209
SRR6706288Light intensity 20%7.949
CNP0000432CNS0095592Slightly white alabastrum(diploid) 121.283
CNS0095593Slightly white alabastrum(diploid) 238.575
CNS0095594Slightly white alabastrum(diploid) 318.746
CNS0095595Whole white alabastrum(diploid) 239.877
CNS0095596Whole white alabastrum(diploid) 344.748
CNS0095597Whole white alabastrum(diploid) 456.105
CNS0095598Silvery flower (diploied) 111.211
CNS0095599Silvery flower (diploied) 26.093
CNS0095600Silvery flower (diploied) 37.703
CNS0095601Golden flower (diploid) 11.521
CNS0095602Golden flower (diploid) 22.573
CNS0095603Golden flower (diploid) 31.009
CNS0095604Slightly white alabastrum(tetraploid) 132.095
CNS0095605Slightly white alabastrum(tetraploid) 224.321
CNS0095606Slightly white alabastrum(tetraploid) 338.036
CNS0095607Whole white alabastrum(tetraploid) 124.001
CNS0095608Whole white alabastrum(tetraploid) 232.038
CNS0095609Whole white alabastrum(tetraploid) 321.097
CNS0095610Silvery flower (tetraploid) 12.424
CNS0095611Silvery flower (tetraploid) 23.208
CNS0095612Silvery flower (tetraploid) 33.689
CNS0095613Golden flower (tetraploid) 10.671
CNS0095614Golden flower (tetraploid) 20.202
CNS0095615Golden flower (tetraploid) 32.204
CRA001975CRR073297Stem 17.414
CRR073298Stem 26.023
CRR073299Stem 38.760
CRR073300Leaf 113.291
CRR073301Leaf 26.706
CRR073302Leaf 312.806
CRR073303Juvenile bud 113.204
CRR073304Juvenile bud 27.446
CRR073305Juvenile bud 39.285
CRR073306Third green 113.581
CRR073307Third green 222.676
CRR073308Third green 318.667
CRR073309Second white 11.059
CRR073310Second white 24.005
CRR073311Second white 30.627
CRR073312Silver flowering 10.013
CRR073313Silver flowering 20.375
CRR073314Silver flowering 30.197
CRR073315Gold flowering 10.153
CRR073316Gold flowering 20.000
CRR073317Gold flowering 31.061
CRR073318Tawny withering 10.000
CRR073319Tawny withering 20.000
CRR073320Tawny withering 30.000