Detail information of GWHGAAZE030134


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_006423537.19.03669E-46hypothetical protein CICLE_v10029871mg [Citrus clementina]
Swissprottr|P33080|AX10A_SOYBN6E-33Auxin-induced protein X10A
trEMBLtr|V4S8K9|V4S8K9_9ROSI3E-46Uncharacterized protein {ECO:0000313|EMBL:ESR36777.1}
TAIR10AT4G38840.12E-29SAUR-like auxin-responsive protein family

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene3867439838674703-
GWHAAZE00000009mRNA3867439838674703-
GWHAAZE00000009exon3867439838674703-
GWHAAZE00000009CDS3867439838674703-
Transcript Sequence

Network for GWHGAAZE030134

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02519.15Auxin_inducible22978.50E-24
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14488SAUR Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName
GO:0009733biological_processresponse to auxin

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf12.893
SRR3591706second leaf42.513
SRR3591707mature leaf32.107
SRR3591708Shoot apex9.781
SRR3591709Stem4.299
SRR3591710White floral bud13.610
SRR3591711White flower1.660
SRR3591712Green floral bud14.612
SRR3591713Yellow flower0.410
SRP173429 SRR8316895Juvenile bud stage 2.141
SRR8316896Juvenile bud stage 8.878
SRR8316897Juvenile bud stage 0.000
SRR8316894Third green stage 3.605
SRR8316900Third green stage 19.140
SRR8316901Third green stage 12.742
SRR8316898Complete white stage 20.334
SRR8316899Complete white stage 11.119
SRR8316903Complete white stage 31.571
SRR8316902Silver flowering stage7.084
SRR8316904Silver flowering stage12.568
SRR8316905Silver flowering stage11.041
SRR8316906Gold flowering stage 8.899
SRR8316907Gold flowering stage 10.270
SRR8316908Gold flowering stage 8.403
SRP132670SRR6706286Control5.449
SRR6706287Light intensity 50%4.874
SRR6706288Light intensity 20%6.828
CNP0000432CNS0095592Slightly white alabastrum(diploid) 117.640
CNS0095593Slightly white alabastrum(diploid) 218.955
CNS0095594Slightly white alabastrum(diploid) 312.772
CNS0095595Whole white alabastrum(diploid) 227.672
CNS0095596Whole white alabastrum(diploid) 332.123
CNS0095597Whole white alabastrum(diploid) 437.865
CNS0095598Silvery flower (diploied) 14.907
CNS0095599Silvery flower (diploied) 29.995
CNS0095600Silvery flower (diploied) 35.319
CNS0095601Golden flower (diploid) 12.000
CNS0095602Golden flower (diploid) 22.821
CNS0095603Golden flower (diploid) 33.344
CNS0095604Slightly white alabastrum(tetraploid) 135.086
CNS0095605Slightly white alabastrum(tetraploid) 232.839
CNS0095606Slightly white alabastrum(tetraploid) 341.522
CNS0095607Whole white alabastrum(tetraploid) 129.116
CNS0095608Whole white alabastrum(tetraploid) 241.602
CNS0095609Whole white alabastrum(tetraploid) 325.141
CNS0095610Silvery flower (tetraploid) 113.811
CNS0095611Silvery flower (tetraploid) 212.927
CNS0095612Silvery flower (tetraploid) 34.580
CNS0095613Golden flower (tetraploid) 11.557
CNS0095614Golden flower (tetraploid) 22.287
CNS0095615Golden flower (tetraploid) 33.381
CRA001975CRR073297Stem 15.127
CRR073298Stem 23.760
CRR073299Stem 32.408
CRR073300Leaf 13.010
CRR073301Leaf 21.544
CRR073302Leaf 32.545
CRR073303Juvenile bud 15.279
CRR073304Juvenile bud 21.023
CRR073305Juvenile bud 32.331
CRR073306Third green 19.898
CRR073307Third green 214.167
CRR073308Third green 37.326
CRR073309Second white 12.705
CRR073310Second white 23.083
CRR073311Second white 31.108
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 18.765
CRR073316Gold flowering 25.686
CRR073317Gold flowering 35.909
CRR073318Tawny withering 10.182
CRR073319Tawny withering 20.219
CRR073320Tawny withering 31.176