Detail information of GWHGAAZE030131


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_006423537.16.23499E-45hypothetical protein CICLE_v10029871mg [Citrus clementina]
Swissprottr|P33081|AX15A_SOYBN8E-35Auxin-induced protein 15A
trEMBLtr|V4S8K9|V4S8K9_9ROSI2E-45Uncharacterized protein {ECO:0000313|EMBL:ESR36777.1}
TAIR10AT4G38840.13E-32SAUR-like auxin-responsive protein family

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene3865530738655591+
GWHAAZE00000009mRNA3865530738655591+
GWHAAZE00000009exon3865530738655591+
GWHAAZE00000009CDS3865530738655591+
Transcript Sequence

Network for GWHGAAZE030131

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02519.15Auxin_inducible20881.40E-23
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14488SAUR Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName
GO:0009733biological_processresponse to auxin

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf7.643
SRR3591706second leaf12.195
SRR3591707mature leaf2.370
SRR3591708Shoot apex1.997
SRR3591709Stem7.416
SRR3591710White floral bud7.998
SRR3591711White flower4.032
SRR3591712Green floral bud5.347
SRR3591713Yellow flower0.496
SRP173429 SRR8316895Juvenile bud stage 0.000
SRR8316896Juvenile bud stage 0.977
SRR8316897Juvenile bud stage 0.827
SRR8316894Third green stage 0.465
SRR8316900Third green stage 3.433
SRR8316901Third green stage 1.745
SRR8316898Complete white stage 2.073
SRR8316899Complete white stage 3.289
SRR8316903Complete white stage 3.113
SRR8316902Silver flowering stage2.021
SRR8316904Silver flowering stage3.001
SRR8316905Silver flowering stage2.228
SRR8316906Gold flowering stage 1.815
SRR8316907Gold flowering stage 1.360
SRR8316908Gold flowering stage 1.144
SRP132670SRR6706286Control4.738
SRR6706287Light intensity 50%4.208
SRR6706288Light intensity 20%6.434
CNP0000432CNS0095592Slightly white alabastrum(diploid) 11.476
CNS0095593Slightly white alabastrum(diploid) 22.821
CNS0095594Slightly white alabastrum(diploid) 32.989
CNS0095595Whole white alabastrum(diploid) 24.879
CNS0095596Whole white alabastrum(diploid) 34.259
CNS0095597Whole white alabastrum(diploid) 44.193
CNS0095598Silvery flower (diploied) 10.000
CNS0095599Silvery flower (diploied) 20.000
CNS0095600Silvery flower (diploied) 30.710
CNS0095601Golden flower (diploid) 10.000
CNS0095602Golden flower (diploid) 20.000
CNS0095603Golden flower (diploid) 30.372
CNS0095604Slightly white alabastrum(tetraploid) 15.296
CNS0095605Slightly white alabastrum(tetraploid) 23.929
CNS0095606Slightly white alabastrum(tetraploid) 33.999
CNS0095607Whole white alabastrum(tetraploid) 16.198
CNS0095608Whole white alabastrum(tetraploid) 22.693
CNS0095609Whole white alabastrum(tetraploid) 32.362
CNS0095610Silvery flower (tetraploid) 11.971
CNS0095611Silvery flower (tetraploid) 20.317
CNS0095612Silvery flower (tetraploid) 30.279
CNS0095613Golden flower (tetraploid) 10.000
CNS0095614Golden flower (tetraploid) 20.523
CNS0095615Golden flower (tetraploid) 30.796
CRA001975CRR073297Stem 11.018
CRR073298Stem 21.058
CRR073299Stem 30.921
CRR073300Leaf 11.174
CRR073301Leaf 20.718
CRR073302Leaf 30.027
CRR073303Juvenile bud 10.417
CRR073304Juvenile bud 20.211
CRR073305Juvenile bud 32.071
CRR073306Third green 16.033
CRR073307Third green 213.510
CRR073308Third green 35.818
CRR073309Second white 10.232
CRR073310Second white 22.254
CRR073311Second white 30.222
CRR073312Silver flowering 10.000
CRR073313Silver flowering 20.000
CRR073314Silver flowering 30.000
CRR073315Gold flowering 10.000
CRR073316Gold flowering 20.000
CRR073317Gold flowering 30.018
CRR073318Tawny withering 10.000
CRR073319Tawny withering 20.167
CRR073320Tawny withering 30.000