Gene detail

Detail information of GWHGAAZE030075

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_008377277.1	0	PREDICTED: BEL1-like homeodomain protein 7 isoform X1 [Malus domestica]
Swissprot	tr\|Q9SIW1\|BLH7_ARATH	4E-130	BEL1-like homeodomain protein 7
trEMBL	tr\|F6I1B0\|F6I1B0_VITVI	0	Putative uncharacterized protein {ECO:0000313\|EMBL:CCB60726.1}
TAIR10	AT2G16400.1	2E-100	BEL1-like homeodomain 7

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000009	gene	37762438	37765849	-
GWHAAZE00000009	mRNA	37762438	37765849	-
GWHAAZE00000009	exon	37762438	37763100	-
GWHAAZE00000009	exon	37763254	37763314	-
GWHAAZE00000009	exon	37763758	37764137	-
GWHAAZE00000009	exon	37764992	37765849	-
GWHAAZE00000009	CDS	37764992	37765849	-
GWHAAZE00000009	CDS	37763758	37764137	-
GWHAAZE00000009	CDS	37763254	37763314	-
GWHAAZE00000009	CDS	37762438	37763100	-

Transcript Sequence
>GWHTAAZE030109 ATGGCCACTTACTTCCCTAGTTCAAACAATCAAAGAGATGCCACACAAATGCTCTACTTAAGAGAACCATTACCTAGTTCTTATTCAGAAACACAGCCCCTTGGAGCCAATAACATGATGATGTACATGAACTACTCCTCTTCCTCCGCTTCATACTCTGATTCACTGGCTGGAAACACCTCTGTCGATATCCCGCCGGTTGGACCACCAGATTCTAATGCGTCCCAACAAGAATTCCTATCTAATCTTGGAGGGTCCCGGATTCCCGACCAAGACTTCAGTTCTTGGAGGGATAGTAGAAGTGAAATGCTGATGATGAACCCAATTCTCCAAGGTGGACTATCACTTAGCCTCAGTCCACAAATACCCTCTGGAATTCAAATCCCATCGGTCCAATATCGGAATCCGAACCCTGGATTCTCTTCGTTCTTGGGAAATAATTCGACAAATGGGTCTTTTAGAGATGACGAAAATTCACAAGGTAAAGGATCGCGAGGTGCTGAATATGTGCTGCCTGGTTTTCCTAATTCGGATTCAATGAAAGCAGATGGTTCTAATTATGCAATGTCAAGTGTTGGAAGATCTGTTCCGAGTTCTAAGTACCTTAAGGCGGCTCAAGAATTGCTCGATGAAGTTGTTAATGTGAGGAAAGCTTTGAAGCAAAATGAGTTTAGGAAAGAGTTAATGAAAGATTCGAAAGAAACTGATGCGGGATCGAAAAATGGCGGCTTGGGTGGGACAGGTGCTGGCTCTTCAAACCCGCATGAGTTGAGCAATAACTCTCCGAGTGAGCTTTCGGTGGCTGAGAAACAGGATTTACAGAATAAGATGACTAAGCTTTTGTCAATGTTGGAGGAGGTTGATAGAAGGTACAAGCAATACTACCACCAGATGCAAATCGTGGTCTCTTCATTTGACGTGATCGCAGGTTCCGGTGCAGCTAAGCCCTACACCGCACTTGCACTCCAGACGATTTCTCGCCACTTCCGTTGCTTGCGAGACTCTATAAATGGCCAGATTCGGCTCACTCAGAAAAGCCTCGGGGAGCAAGACGGCTCAGTAAACGGCAAAGGGGTAGGAATATCTCGGCTCCGTTATGTGGACCAGCAGCTCCGTCAGCAAAGAGCCCTTCAGCAGCTCGGAATGATGCAACAACACACTTGGAGGCCCCAACGGGGTCTGCCGGAAAGCTCCGTTTCGATTCTCCGAGCTTGGCTTTTCGAACATTTTCTTCACCCCTACCCAAAAGATTCTGATAAGATCATGCTAGCAAGGCAGACCGGGTTGACAAGAAGTCAGGTCTCAAACTGGTTCATAAACGCTCGAGTGCGTCTATGGAAGCCCATGGTTGAAGAAATGTACAAAGAAGAGGCCGGTGATAATGCCGAAATGGACTCCACTTCTTCATCCGAAATAGCTACAAAAGGAAATACAAAACCCTTAGAGGACAGAGTGGAAAACTTACAACAAACTGCAACCTCCACATCAACCGTCCGATGCAGCACGGGCCAATTCTTCGAGCCGAGGTCATCTGATCACCTCCCCGATGTAGACATGGTGGGACCCGCTGCTGGCTTTCAAAATGTGGGCCACACCGAAGGGAAATTGAAAGGGGACCAAAGGGCTAATGTGGATGAGTGTAGCTTTTATCAAGATAGCATGGTTCAGCCGAATGGTGGCACCCAGCGGTTCATGGCGGCTGCGGCTTACCACGTGGCTGAGCCCGGGCGATTCAATAACGGTGGCGGTGTGTCGCTCACATTAGGATTACACCGCGAGGACGCAATGGGTTCTGTTGGGGCCCACCATGGCTTCATGACCATTAGAGGGGGCGAGGGTTATGGTGCACCAGGCCCGTCGGCAGGGCCTGAGAATGCTGATTTTGATTGCTTGGAATCTGGATCGACCCGACAGCATAACGGGTTCGGGTCCTCTCATTTGTTACATGATTTTGTAGCATGA

Network for GWHGAAZE030075

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF07526.12	POX	196	336	2.80E-50
PF05920.12	Homeobox_KN	405	444	2.60E-17

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	HB-BELL

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006355	biological_process	regulation of transcription, DNA-templated
GO:0003677	molecular_function	DNA binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	46.788
	SRR3591706	second leaf	34.961
	SRR3591707	mature leaf	67.709
	SRR3591708	Shoot apex	32.417
	SRR3591709	Stem	83.185
	SRR3591710	White floral bud	125.120
	SRR3591711	White flower	151.550
	SRR3591712	Green floral bud	45.741
	SRR3591713	Yellow flower	108.721
SRP173429	SRR8316895	Juvenile bud stage	27.158
	SRR8316896	Juvenile bud stage	29.010
	SRR8316897	Juvenile bud stage	15.464
	SRR8316894	Third green stage	13.178
	SRR8316900	Third green stage	30.568
	SRR8316901	Third green stage	34.730
	SRR8316898	Complete white stage	43.880
	SRR8316899	Complete white stage	57.857
	SRR8316903	Complete white stage	74.923
	SRR8316902	Silver flowering stage	64.374
	SRR8316904	Silver flowering stage	99.893
	SRR8316905	Silver flowering stage	57.302
	SRR8316906	Gold flowering stage	163.396
	SRR8316907	Gold flowering stage	158.914
	SRR8316908	Gold flowering stage	175.999
SRP132670	SRR6706286	Control	39.580
	SRR6706287	Light intensity 50%	39.081
	SRR6706288	Light intensity 20%	36.850
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	18.948
	CNS0095593	Slightly white alabastrum(diploid) 2	20.290
	CNS0095594	Slightly white alabastrum(diploid) 3	20.867
	CNS0095595	Whole white alabastrum(diploid) 2	17.814
	CNS0095596	Whole white alabastrum(diploid) 3	14.160
	CNS0095597	Whole white alabastrum(diploid) 4	18.107
	CNS0095598	Silvery flower (diploied) 1	64.510
	CNS0095599	Silvery flower (diploied) 2	52.917
	CNS0095600	Silvery flower (diploied) 3	137.702
	CNS0095601	Golden flower (diploid) 1	52.023
	CNS0095602	Golden flower (diploid) 2	110.776
	CNS0095603	Golden flower (diploid) 3	106.703
	CNS0095604	Slightly white alabastrum(tetraploid) 1	22.422
	CNS0095605	Slightly white alabastrum(tetraploid) 2	16.649
	CNS0095606	Slightly white alabastrum(tetraploid) 3	43.813
	CNS0095607	Whole white alabastrum(tetraploid) 1	16.163
	CNS0095608	Whole white alabastrum(tetraploid) 2	12.617
	CNS0095609	Whole white alabastrum(tetraploid) 3	31.230
	CNS0095610	Silvery flower (tetraploid) 1	128.533
	CNS0095611	Silvery flower (tetraploid) 2	136.444
	CNS0095612	Silvery flower (tetraploid) 3	293.922
	CNS0095613	Golden flower (tetraploid) 1	109.199
	CNS0095614	Golden flower (tetraploid) 2	137.179
	CNS0095615	Golden flower (tetraploid) 3	209.357
CRA001975	CRR073297	Stem 1	51.414
	CRR073298	Stem 2	42.882
	CRR073299	Stem 3	39.749
	CRR073300	Leaf 1	39.788
	CRR073301	Leaf 2	40.515
	CRR073302	Leaf 3	29.965
	CRR073303	Juvenile bud 1	32.604
	CRR073304	Juvenile bud 2	44.934
	CRR073305	Juvenile bud 3	43.373
	CRR073306	Third green 1	304.040
	CRR073307	Third green 2	188.622
	CRR073308	Third green 3	242.433
	CRR073309	Second white 1	232.870
	CRR073310	Second white 2	421.940
	CRR073311	Second white 3	375.129
	CRR073312	Silver flowering 1	275.997
	CRR073313	Silver flowering 2	208.158
	CRR073314	Silver flowering 3	231.271
	CRR073315	Gold flowering 1	85.973
	CRR073316	Gold flowering 2	126.226
	CRR073317	Gold flowering 3	50.362
	CRR073318	Tawny withering 1	66.126
	CRR073319	Tawny withering 2	47.094
	CRR073320	Tawny withering 3	73.704