Detail information of GWHGAAZE030058


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002283855.10PREDICTED: glucose-1-phosphate adenylyltransferase large subunit 1 [Vitis vinifera]
COGYP_007066226.11E-176glucose-1-phosphate adenylyltransferase
Swissprottr|Q00081|GLGL1_SOLTU0Glucose-1-phosphate adenylyltransferase large subunit 1 (Fragment)
trEMBLtr|F6I0L5|F6I0L5_VITVI0Glucose-1-phosphate adenylyltransferase {ECO:0000256|RuleBase:RU003565}
TAIR10AT4G39210.10Glucose-1-phosphate adenylyltransferase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene3750118537506726-
GWHAAZE00000009mRNA3750118537506726-
GWHAAZE00000009exon3750649937506726-
GWHAAZE00000009exon3750531337505435-
GWHAAZE00000009exon3750469237504862-
GWHAAZE00000009exon3750438337504475-
GWHAAZE00000009exon3750416137504213-
GWHAAZE00000009exon3750352237503617-
GWHAAZE00000009exon3750332137503414-
GWHAAZE00000009exon3750270437502889-
GWHAAZE00000009exon3750253137502611-
GWHAAZE00000009exon3750227437502360-
GWHAAZE00000009exon3750188037501984-
GWHAAZE00000009exon3750168637501792-
GWHAAZE00000009exon3750151937501579-
GWHAAZE00000009exon3750118537501421-
GWHAAZE00000009CDS3750649937506726-
GWHAAZE00000009CDS3750531337505435-
GWHAAZE00000009CDS3750469237504862-
GWHAAZE00000009CDS3750438337504475-
GWHAAZE00000009CDS3750416137504213-
GWHAAZE00000009CDS3750352237503617-
GWHAAZE00000009CDS3750332137503414-
GWHAAZE00000009CDS3750270437502889-
GWHAAZE00000009CDS3750253137502611-
GWHAAZE00000009CDS3750227437502360-
GWHAAZE00000009CDS3750188037501984-
GWHAAZE00000009CDS3750168637501792-
GWHAAZE00000009CDS3750151937501579-
GWHAAZE00000009CDS3750132037501421-
GWHAAZE00000009three_prime_UTR3750118537501319-
Transcript Sequence

Network for GWHGAAZE030058

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00483.24NTP_transferase953741.30E-69
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K00975glgC Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Starch and sucrose metabolismmap00500
Amino sugar and nucleotide sugar metabolismmap00520
Biofilm formation - Escherichia colimap02026

Gene Ontology

GO term OntologyName
GO:0005978biological_processglycogen biosynthetic process
GO:0009058biological_processbiosynthetic process
GO:0008878molecular_functionglucose-1-phosphate adenylyltransferase activity
GO:0016779molecular_functionnucleotidyltransferase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf9.259
SRR3591706second leaf1.399
SRR3591707mature leaf1.086
SRR3591708Shoot apex2.031
SRR3591709Stem3.716
SRR3591710White floral bud29.102
SRR3591711White flower8.433
SRR3591712Green floral bud104.705
SRR3591713Yellow flower7.606
SRP173429 SRR8316895Juvenile bud stage 38.612
SRR8316896Juvenile bud stage 41.716
SRR8316897Juvenile bud stage 19.922
SRR8316894Third green stage 25.930
SRR8316900Third green stage 111.175
SRR8316901Third green stage 83.546
SRR8316898Complete white stage 13.053
SRR8316899Complete white stage 98.707
SRR8316903Complete white stage 16.191
SRR8316902Silver flowering stage4.877
SRR8316904Silver flowering stage6.405
SRR8316905Silver flowering stage2.315
SRR8316906Gold flowering stage 8.884
SRR8316907Gold flowering stage 11.126
SRR8316908Gold flowering stage 6.200
SRP132670SRR6706286Control112.589
SRR6706287Light intensity 50%125.478
SRR6706288Light intensity 20%143.834
CNP0000432CNS0095592Slightly white alabastrum(diploid) 143.544
CNS0095593Slightly white alabastrum(diploid) 231.773
CNS0095594Slightly white alabastrum(diploid) 325.080
CNS0095595Whole white alabastrum(diploid) 237.704
CNS0095596Whole white alabastrum(diploid) 354.862
CNS0095597Whole white alabastrum(diploid) 432.586
CNS0095598Silvery flower (diploied) 19.256
CNS0095599Silvery flower (diploied) 214.450
CNS0095600Silvery flower (diploied) 312.965
CNS0095601Golden flower (diploid) 17.954
CNS0095602Golden flower (diploid) 27.907
CNS0095603Golden flower (diploid) 38.146
CNS0095604Slightly white alabastrum(tetraploid) 180.833
CNS0095605Slightly white alabastrum(tetraploid) 271.032
CNS0095606Slightly white alabastrum(tetraploid) 3127.554
CNS0095607Whole white alabastrum(tetraploid) 124.498
CNS0095608Whole white alabastrum(tetraploid) 242.824
CNS0095609Whole white alabastrum(tetraploid) 3190.199
CNS0095610Silvery flower (tetraploid) 116.359
CNS0095611Silvery flower (tetraploid) 239.776
CNS0095612Silvery flower (tetraploid) 335.511
CNS0095613Golden flower (tetraploid) 11.519
CNS0095614Golden flower (tetraploid) 215.937
CNS0095615Golden flower (tetraploid) 33.406
CRA001975CRR073297Stem 174.205
CRR073298Stem 275.505
CRR073299Stem 367.479
CRR073300Leaf 187.216
CRR073301Leaf 280.452
CRR073302Leaf 3130.830
CRR073303Juvenile bud 1106.549
CRR073304Juvenile bud 297.686
CRR073305Juvenile bud 393.524
CRR073306Third green 110.543
CRR073307Third green 24.810
CRR073308Third green 38.880
CRR073309Second white 14.801
CRR073310Second white 24.921
CRR073311Second white 33.279
CRR073312Silver flowering 10.394
CRR073313Silver flowering 20.670
CRR073314Silver flowering 30.432
CRR073315Gold flowering 14.728
CRR073316Gold flowering 23.900
CRR073317Gold flowering 31.569
CRR073318Tawny withering 12.346
CRR073319Tawny withering 20.953
CRR073320Tawny withering 32.832