Gene detail

Detail information of GWHGAAZE029972

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_007042356.1	1.3525E-175	Peroxidase superfamily protein [Theobroma cacao]
Swissprot	tr\|Q9FX85\|PER10_ARATH	1E-146	Peroxidase 10 (Precursor)
trEMBL	tr\|A0A061E0R3\|A0A061E0R3_THECC	5E-176	Peroxidase superfamily protein {ECO:0000313\|EMBL:EOX98187.1}
TAIR10	AT1G49570.1	1E-111	Peroxidase superfamily protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000009	gene	36056974	36058965	-
GWHAAZE00000009	mRNA	36056974	36058965	-
GWHAAZE00000009	exon	36056974	36057383	-
GWHAAZE00000009	exon	36057553	36057718	-
GWHAAZE00000009	exon	36058072	36058263	-
GWHAAZE00000009	exon	36058750	36058965	-
GWHAAZE00000009	CDS	36058750	36058965	-
GWHAAZE00000009	CDS	36058072	36058263	-
GWHAAZE00000009	CDS	36057553	36057718	-
GWHAAZE00000009	CDS	36056974	36057383	-

Transcript Sequence
>GWHTAAZE030006 ATGGGTCGTAAAAGTTTGTCCTACCTTATAATTCCCTTCTTTCTAATCCTTGTTTTAGCTTCCTTTAGTTATGGCCAACTTGACTACAATTACTATGATGCATCTTGCCCTAACCTATCTATGATTGTCAGGTTTGGTGTTTGGGCAGCTTTCAGGAATGACACCAGGATAGCTGCATCGCTTCTTCGCTTGCACTTTCATGATTGTTTCGTTAATGGTTGTGATGGTTCCATACTTCTTGATGGCACTAAGGGTTCCAAAGGGGAAAAGAATGCTCTCCCGAACCGCAATTCAGTCAGAGGATTTGAAGTCATTGACACCATTAAAGCCGAACTTGAAAAGGATTGCCCATCAACTGTTTCATGTGTTGACATATTGACTCTTGCTGCTAGAGAAGCCGTCCTTATGTCAGGAGGGCCTTATTGGCCTGTCCTATTAGGCCGACGAGATGGACTAAAAGCAAGCGAGAAAGCGGCAAACGAAAAATTACCTTCGCCAATTGAGCCTCTCGAAAACATTACTGCCAAGTTCGCCTCATATGGTTTTGACATGAAGGATGTTGTAGTCCTCTCAGGAGCACACACTATAGGTTATGCCCAATGCTTCACATTCAAGGGGAGGCTATTCAACTATAAAGGGTCCAGAAAACCCGATCCATCACTCGACTCGTCGCTTCTCTCAAGCTTGCAAAGTACGTGCCCCGATGTAGATGGCTCAAATACGAAGCTTTCGCCTCTAGACTCTTCAACAACTTACATGTTTGATAACACCTACTACAAGAACCTAGTGAACAATGCAGGTCTTCTTGAATCTGATCAAGCCTTAATGGGGAACCCGAAAACTGCTGCTTTGGTGAACGATTATAGCGTTAATGCGCCTCTTTTTGCAAGCGATTTTTCAGCATCAATGGTGAAGCTAGGAAATATTGGAGTACTCACTGGGAAAGCTGGGAAAATTAGGAAGAAATGTGGCTCCGTTAACTAG

Network for GWHGAAZE029972

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00141.24	peroxidase	47	289	2.40E-73

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K00430	E1.11.1.7	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Phenylpropanoid biosynthesis	map00940

Gene Ontology

GO term	Ontology	Name
GO:0042744	biological_process	hydrogen peroxide catabolic process
GO:0006979	biological_process	response to oxidative stress
GO:0055114	biological_process	oxidation-reduction process
GO:0004601	molecular_function	peroxidase activity
GO:0020037	molecular_function	heme binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.000
	SRR3591706	second leaf	0.000
	SRR3591707	mature leaf	0.000
	SRR3591708	Shoot apex	0.136
	SRR3591709	Stem	0.000
	SRR3591710	White floral bud	0.000
	SRR3591711	White flower	0.000
	SRR3591712	Green floral bud	0.000
	SRR3591713	Yellow flower	0.000
SRP173429	SRR8316895	Juvenile bud stage	0.090
	SRR8316896	Juvenile bud stage	0.960
	SRR8316897	Juvenile bud stage	0.000
	SRR8316894	Third green stage	0.226
	SRR8316900	Third green stage	0.088
	SRR8316901	Third green stage	0.106
	SRR8316898	Complete white stage	0.305
	SRR8316899	Complete white stage	0.194
	SRR8316903	Complete white stage	0.740
	SRR8316902	Silver flowering stage	0.053
	SRR8316904	Silver flowering stage	0.000
	SRR8316905	Silver flowering stage	0.000
	SRR8316906	Gold flowering stage	0.000
	SRR8316907	Gold flowering stage	0.000
	SRR8316908	Gold flowering stage	0.000
SRP132670	SRR6706286	Control	0.035
	SRR6706287	Light intensity 50%	0.000
	SRR6706288	Light intensity 20%	0.000
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	1.260
	CNS0095593	Slightly white alabastrum(diploid) 2	0.072
	CNS0095594	Slightly white alabastrum(diploid) 3	0.236
	CNS0095595	Whole white alabastrum(diploid) 2	0.000
	CNS0095596	Whole white alabastrum(diploid) 3	0.000
	CNS0095597	Whole white alabastrum(diploid) 4	0.000
	CNS0095598	Silvery flower (diploied) 1	0.000
	CNS0095599	Silvery flower (diploied) 2	0.060
	CNS0095600	Silvery flower (diploied) 3	0.069
	CNS0095601	Golden flower (diploid) 1	0.000
	CNS0095602	Golden flower (diploid) 2	0.000
	CNS0095603	Golden flower (diploid) 3	0.001
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.000
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.000
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.000
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.065
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.000
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.000
	CNS0095610	Silvery flower (tetraploid) 1	0.000
	CNS0095611	Silvery flower (tetraploid) 2	0.000
	CNS0095612	Silvery flower (tetraploid) 3	0.000
	CNS0095613	Golden flower (tetraploid) 1	0.000
	CNS0095614	Golden flower (tetraploid) 2	0.000
	CNS0095615	Golden flower (tetraploid) 3	0.000
CRA001975	CRR073297	Stem 1	0.149
	CRR073298	Stem 2	0.292
	CRR073299	Stem 3	0.000
	CRR073300	Leaf 1	0.081
	CRR073301	Leaf 2	0.000
	CRR073302	Leaf 3	0.000
	CRR073303	Juvenile bud 1	0.000
	CRR073304	Juvenile bud 2	0.038
	CRR073305	Juvenile bud 3	0.435
	CRR073306	Third green 1	0.000
	CRR073307	Third green 2	0.000
	CRR073308	Third green 3	0.000
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.000
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	0.000
	CRR073316	Gold flowering 2	0.000
	CRR073317	Gold flowering 3	0.000
	CRR073318	Tawny withering 1	0.000
	CRR073319	Tawny withering 2	0.000
	CRR073320	Tawny withering 3	0.000