Detail information of GWHGAAZE029905


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007200586.18.4869E-129hypothetical protein PRUPE_ppa010141mg [Prunus persica]
Swissprottr|P46266|1433_PEA1E-12814-3-3-like protein
trEMBLtr|M5W4R9|M5W4R9_PRUPE3E-129Uncharacterized protein {ECO:0000313|EMBL:EMJ01785.1}
TAIR10AT1G78300.16E-92general regulatory factor 2

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene3506861735072405-
GWHAAZE00000009mRNA3506861735072405-
GWHAAZE00000009exon3506861735068676-
GWHAAZE00000009exon3506878135068897-
GWHAAZE00000009exon3507101135071089-
GWHAAZE00000009exon3507199935072405-
GWHAAZE00000009CDS3507199935072405-
GWHAAZE00000009CDS3507101135071089-
GWHAAZE00000009CDS3506878135068897-
GWHAAZE00000009CDS3506861735068676-
Transcript Sequence

Network for GWHGAAZE029905

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0097GO:0019904 protein domain specific binding GOslim:molecular_function
map04391 Hippo signaling pathway - fly
map04011 MAPK signaling pathway - yeast
map04722 Neurotrophin signaling pathway
map04390 Hippo signaling pathway
map04621 NOD-like receptor signaling pathway
map04151 PI3K-Akt signaling pathway
map04114 Oocyte meiosis
map04110 Cell cycle
GO:0006556 S-adenosylmethionine biosynthetic process GOslim:biological_process
GO:0004478 methionine adenosyltransferase activity GOslim:molecular_function


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00244.212014/3/3131621.80E-57
PF00244.212014/3/31601974.30E-14
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K06630YWHAE MAPK signaling pathway - yeast map04011
Hippo signaling pathwaymap04390
Hippo signaling pathway - flymap04391
PI3K-Akt signaling pathwaymap04151
Cell cyclemap04110
Oocyte meiosismap04114
NOD-like receptor signaling pathwaymap04621
Neurotrophin signaling pathwaymap04722

Gene Ontology

GO term OntologyName
GO:0019904molecular_functionprotein domain specific binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf200.336
SRR3591706second leaf62.368
SRR3591707mature leaf20.557
SRR3591708Shoot apex165.065
SRR3591709Stem96.902
SRR3591710White floral bud263.683
SRR3591711White flower106.892
SRR3591712Green floral bud252.815
SRR3591713Yellow flower104.507
SRP173429 SRR8316895Juvenile bud stage 87.483
SRR8316896Juvenile bud stage 148.751
SRR8316897Juvenile bud stage 80.416
SRR8316894Third green stage 69.991
SRR8316900Third green stage 252.492
SRR8316901Third green stage 250.022
SRR8316898Complete white stage 80.073
SRR8316899Complete white stage 127.340
SRR8316903Complete white stage 95.663
SRR8316902Silver flowering stage59.086
SRR8316904Silver flowering stage80.097
SRR8316905Silver flowering stage44.886
SRR8316906Gold flowering stage 129.562
SRR8316907Gold flowering stage 132.953
SRR8316908Gold flowering stage 140.632
SRP132670SRR6706286Control243.551
SRR6706287Light intensity 50%249.249
SRR6706288Light intensity 20%252.832
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1137.329
CNS0095593Slightly white alabastrum(diploid) 2134.679
CNS0095594Slightly white alabastrum(diploid) 3131.447
CNS0095595Whole white alabastrum(diploid) 2162.641
CNS0095596Whole white alabastrum(diploid) 3209.673
CNS0095597Whole white alabastrum(diploid) 4179.085
CNS0095598Silvery flower (diploied) 129.059
CNS0095599Silvery flower (diploied) 262.708
CNS0095600Silvery flower (diploied) 372.710
CNS0095601Golden flower (diploid) 135.813
CNS0095602Golden flower (diploid) 256.994
CNS0095603Golden flower (diploid) 353.366
CNS0095604Slightly white alabastrum(tetraploid) 1212.623
CNS0095605Slightly white alabastrum(tetraploid) 2209.136
CNS0095606Slightly white alabastrum(tetraploid) 3144.080
CNS0095607Whole white alabastrum(tetraploid) 1273.927
CNS0095608Whole white alabastrum(tetraploid) 2360.776
CNS0095609Whole white alabastrum(tetraploid) 3278.169
CNS0095610Silvery flower (tetraploid) 166.040
CNS0095611Silvery flower (tetraploid) 272.563
CNS0095612Silvery flower (tetraploid) 3141.776
CNS0095613Golden flower (tetraploid) 136.496
CNS0095614Golden flower (tetraploid) 238.126
CNS0095615Golden flower (tetraploid) 374.617
CRA001975CRR073297Stem 1174.002
CRR073298Stem 2179.190
CRR073299Stem 3190.232
CRR073300Leaf 1264.339
CRR073301Leaf 2235.959
CRR073302Leaf 3326.556
CRR073303Juvenile bud 1311.335
CRR073304Juvenile bud 2361.415
CRR073305Juvenile bud 3218.972
CRR073306Third green 1374.113
CRR073307Third green 2461.418
CRR073308Third green 3337.889
CRR073309Second white 1254.532
CRR073310Second white 2155.411
CRR073311Second white 3117.666
CRR073312Silver flowering 1213.383
CRR073313Silver flowering 2258.499
CRR073314Silver flowering 3184.708
CRR073315Gold flowering 197.075
CRR073316Gold flowering 239.513
CRR073317Gold flowering 375.672
CRR073318Tawny withering 1260.559
CRR073319Tawny withering 2186.619
CRR073320Tawny withering 3200.028