Gene detail

Detail information of GWHGAAZE029625

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	KDP28732.1	1.2239E-119	hypothetical protein JCGZ_14503 [Jatropha curcas]
COG	YP_001012997.1	2E-25	ATPase
Swissprot	tr\|O64629\|AUR3_ARATH	1E-110	Serine/threonine-protein kinase Aurora-3
trEMBL	tr\|A0A067JY03\|A0A067JY03_JATCU	5E-120	Uncharacterized protein {ECO:0000313\|EMBL:KDP28732.1}
TAIR10	AT2G45490.1	7E-92	ataurora3

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000009	gene	30062638	30072855	+
GWHAAZE00000009	mRNA	30062638	30072855	+
GWHAAZE00000009	exon	30062638	30062819	+
GWHAAZE00000009	exon	30063006	30063221	+
GWHAAZE00000009	exon	30064086	30064181	+
GWHAAZE00000009	exon	30064911	30065125	+
GWHAAZE00000009	exon	30065216	30065288	+
GWHAAZE00000009	exon	30065395	30065479	+
GWHAAZE00000009	exon	30070384	30070403	+
GWHAAZE00000009	exon	30070772	30071009	+
GWHAAZE00000009	exon	30071857	30071949	+
GWHAAZE00000009	exon	30072041	30072156	+
GWHAAZE00000009	exon	30072263	30072343	+
GWHAAZE00000009	exon	30072613	30072855	+
GWHAAZE00000009	five_prime_UTR	30062638	30062699	+
GWHAAZE00000009	CDS	30062700	30062819	+
GWHAAZE00000009	CDS	30063006	30063221	+
GWHAAZE00000009	CDS	30064086	30064181	+
GWHAAZE00000009	CDS	30064911	30065125	+
GWHAAZE00000009	CDS	30065216	30065288	+
GWHAAZE00000009	CDS	30065395	30065479	+
GWHAAZE00000009	CDS	30070384	30070403	+
GWHAAZE00000009	CDS	30070772	30071009	+
GWHAAZE00000009	CDS	30071857	30071949	+
GWHAAZE00000009	CDS	30072041	30072156	+
GWHAAZE00000009	CDS	30072263	30072343	+
GWHAAZE00000009	CDS	30072613	30072855	+

Transcript Sequence
>GWHTAAZE029659 TTCCCTCTAAATCTGAATCAGAAAACCCCCAGTTCGTTCTCCTACATTCCCAAATCACAAAAATGGCGTCCAAAACTGAAAAACAAGACCCTAAAAAACAATGGTCCTTAGAAGACTTCGAGATTGGAAAGCCCCTCGGCAAGGGCAAATTCGGACGCGTCTACCTCGCCCGTGAAATCAAGAGCCAATACATCGTAACATTGAAGCTGATATTCGAGAGAGATTTGAATTGTTTAGAGTTGGGTCTGAATTTGAATGTGTTTTGTGGAACAGAGCCAGTACATAGTGGCATTGAAGGTGATATTCAAAGAGCAAATAGAAGTCTGATTTCACCACCACTTAAAAAGAGATGGAGATCCAAACTAGTCTTCGTCACCCTAACGTTCTCAGGCTCTTTGTACATATCAAGCTTAGCACAAGCATTGGCATATTGTCACGAGAAGGGTGTGATTCATAGGGATATCAAGCCTGAAAACTTGTTACTTGATCATGAGGGTGTATTGAAGATTGCGGATTTTGGATGGTCGGTCCAATCGAAAAGCAAGAGACACACCATGTGTGGAACTTTGGACTATTTAGCACCAGAAATGGTGGAGAACAAAGCTCATGATTACGCTGTTGATAATTGGACATTGGGTATCCTTTGTTATGAGTTTTTGTATGGCAGCCCTCCATTTGAGGCAGAAAGCCAAGTAGATACGCTCAAAAGGATTATGAAGATTGACCTGAATTTCCCTTCCACCCCTCAAGTTTCTGCAGAGGCTAAAAATCTCATTACTCGGCTTCTAGTGAAGGACTCTTCTAAAAGGCTCTCTCTTGGGAAGATAATTGAGCACCCTTGGATTATCAAGAATGCTGATCCCACAAGTCGCACGTCTGTAAACAAGAACATCTTACCCAAGGCACACACTGCAGCAGTTTTGCCAACAATGCCTGCTACTAGAAAAGAGGCAGTACACAAGTTTTTTGGTCCCAGTGGAAGGGGCTCTGTTGTGAGGAGCCAGTCTAACAAAGTCGTAAGCTCAAAACCTACACAAGAATCTAGCACTGGTGATGAAAAGCTGGTTGAAATGATGAATTCTGTGATCGTGGACAGAAGTCCTTCTGTCAAATGGGAAGATATCGCTGGCCTTGAAAAGGCTAAACAAGCCTTGCTGGAAATGGCAATCCTACGAACAAGAAGAGACCTATTTACAGGCCTTCGTAAGCCGGCTCGAGGTTTGCTTCTCTTTGGTCCACCCGGTACTGGGAAGACCATGCTTGCCAAAGCAGTTGCTTCAGAGTCCGAGGCAACTTTTTTTAATGTTTCTGCTTCTACCCTAACGTCTAAATGGGTGGGAGAGGGTGAAAAGCTTGTTCGGAGTCTTTTCATGGTTGCTATTTCCAGGCAGCCATCTGTAATATTCATGGATGAATATGGGATTGCGTATCTAAGGCCTTGTGAAGAGGGTCCGCTGCAAGAGCAAATTTGGTCTTCCCAGTGGGTGGGATGCTATAATCTTGGGCCAATGTTTATTTGCCCTTTGTCCTCTCTTGCACCAAATCAATTCCTCTCCCAACTTTTAGTAAAAGCCTCCATCGACATTTCTCAATGGAACTTCGCACTGGCAGCTGGGTTTCCTATTTCAGGGCATCCACCTCAATGTGATTTTGGCTAG

Network for GWHGAAZE029625

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00069.26	Pkinase	112	261	8.30E-46
PF00004.30	AAA	387	451	1.30E-20

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	Aur

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0004672	molecular_function	protein kinase activity
GO:0005524	molecular_function	ATP binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	12.986
	SRR3591706	second leaf	9.793
	SRR3591707	mature leaf	10.673
	SRR3591708	Shoot apex	13.791
	SRR3591709	Stem	16.047
	SRR3591710	White floral bud	12.983
	SRR3591711	White flower	15.062
	SRR3591712	Green floral bud	17.489
	SRR3591713	Yellow flower	14.031
SRP173429	SRR8316895	Juvenile bud stage	1.081
	SRR8316896	Juvenile bud stage	1.841
	SRR8316897	Juvenile bud stage	2.220
	SRR8316894	Third green stage	0.980
	SRR8316900	Third green stage	2.764
	SRR8316901	Third green stage	2.363
	SRR8316898	Complete white stage	1.107
	SRR8316899	Complete white stage	2.480
	SRR8316903	Complete white stage	1.679
	SRR8316902	Silver flowering stage	0.746
	SRR8316904	Silver flowering stage	1.825
	SRR8316905	Silver flowering stage	0.520
	SRR8316906	Gold flowering stage	1.842
	SRR8316907	Gold flowering stage	1.429
	SRR8316908	Gold flowering stage	2.650
SRP132670	SRR6706286	Control	1.336
	SRR6706287	Light intensity 50%	1.451
	SRR6706288	Light intensity 20%	1.784
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	1.831
	CNS0095593	Slightly white alabastrum(diploid) 2	2.079
	CNS0095594	Slightly white alabastrum(diploid) 3	1.627
	CNS0095595	Whole white alabastrum(diploid) 2	2.196
	CNS0095596	Whole white alabastrum(diploid) 3	2.076
	CNS0095597	Whole white alabastrum(diploid) 4	1.596
	CNS0095598	Silvery flower (diploied) 1	2.920
	CNS0095599	Silvery flower (diploied) 2	1.582
	CNS0095600	Silvery flower (diploied) 3	1.438
	CNS0095601	Golden flower (diploid) 1	2.370
	CNS0095602	Golden flower (diploid) 2	1.348
	CNS0095603	Golden flower (diploid) 3	0.821
	CNS0095604	Slightly white alabastrum(tetraploid) 1	2.303
	CNS0095605	Slightly white alabastrum(tetraploid) 2	2.524
	CNS0095606	Slightly white alabastrum(tetraploid) 3	3.529
	CNS0095607	Whole white alabastrum(tetraploid) 1	2.453
	CNS0095608	Whole white alabastrum(tetraploid) 2	1.660
	CNS0095609	Whole white alabastrum(tetraploid) 3	2.220
	CNS0095610	Silvery flower (tetraploid) 1	2.483
	CNS0095611	Silvery flower (tetraploid) 2	2.179
	CNS0095612	Silvery flower (tetraploid) 3	1.832
	CNS0095613	Golden flower (tetraploid) 1	1.319
	CNS0095614	Golden flower (tetraploid) 2	1.662
	CNS0095615	Golden flower (tetraploid) 3	2.184
CRA001975	CRR073297	Stem 1	1.704
	CRR073298	Stem 2	1.766
	CRR073299	Stem 3	1.246
	CRR073300	Leaf 1	2.046
	CRR073301	Leaf 2	1.841
	CRR073302	Leaf 3	0.841
	CRR073303	Juvenile bud 1	0.864
	CRR073304	Juvenile bud 2	0.727
	CRR073305	Juvenile bud 3	0.514
	CRR073306	Third green 1	0.492
	CRR073307	Third green 2	0.311
	CRR073308	Third green 3	0.181
	CRR073309	Second white 1	0.137
	CRR073310	Second white 2	0.547
	CRR073311	Second white 3	0.146
	CRR073312	Silver flowering 1	0.531
	CRR073313	Silver flowering 2	0.087
	CRR073314	Silver flowering 3	0.076
	CRR073315	Gold flowering 1	0.579
	CRR073316	Gold flowering 2	1.202
	CRR073317	Gold flowering 3	0.081
	CRR073318	Tawny withering 1	1.389
	CRR073319	Tawny withering 2	1.538
	CRR073320	Tawny withering 3	1.206