Detail information of GWHGAAZE029606


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDP42456.14.05728E-81hypothetical protein JCGZ_00253 [Jatropha curcas]
COGYP_629221.10.000001serine/threonine protein kinase
Swissprottr|Q39019|KSG10_ARATH1E-81Shaggy-related protein kinase kappa
trEMBLtr|A0A067L1V5|A0A067L1V5_JATCU2E-81Uncharacterized protein {ECO:0000313|EMBL:KDP42456.1}
TAIR10AT1G09840.64E-67shaggy-like protein kinase 41

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000009gene2980286329804644+
GWHAAZE00000009mRNA2980286329804644+
GWHAAZE00000009exon2980286329802907+
GWHAAZE00000009exon2980308529803141+
GWHAAZE00000009exon2980376529803905+
GWHAAZE00000009exon2980400129804051+
GWHAAZE00000009exon2980453729804644+
GWHAAZE00000009CDS2980286329802907+
GWHAAZE00000009CDS2980308529803141+
GWHAAZE00000009CDS2980376529803905+
GWHAAZE00000009CDS2980400129804051+
GWHAAZE00000009CDS2980453729804644+
Transcript Sequence

Network for GWHGAAZE029606

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0155Protein Kinases CMGC_GSK family Protein Kinases CMGC_GSK
GO:0006468 protein phosphorylation GOslim:biological_process
GO:0004672 protein kinase activity GOslim:molecular_function
GO:0005524 ATP binding GOslim:molecular_function


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.26Pkinase161081.10E-23
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyCMGC_GSK

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0004672molecular_functionprotein kinase activity
GO:0005524molecular_functionATP binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf72.242
SRR3591706second leaf123.973
SRR3591707mature leaf150.705
SRR3591708Shoot apex64.696
SRR3591709Stem214.306
SRR3591710White floral bud67.409
SRR3591711White flower46.579
SRR3591712Green floral bud109.220
SRR3591713Yellow flower28.896
SRP173429 SRR8316895Juvenile bud stage 37.456
SRR8316896Juvenile bud stage 40.854
SRR8316897Juvenile bud stage 16.946
SRR8316894Third green stage 21.556
SRR8316900Third green stage 109.199
SRR8316901Third green stage 101.545
SRR8316898Complete white stage 49.920
SRR8316899Complete white stage 204.753
SRR8316903Complete white stage 70.639
SRR8316902Silver flowering stage10.642
SRR8316904Silver flowering stage12.180
SRR8316905Silver flowering stage4.767
SRR8316906Gold flowering stage 13.254
SRR8316907Gold flowering stage 16.906
SRR8316908Gold flowering stage 21.750
SRP132670SRR6706286Control66.367
SRR6706287Light intensity 50%87.712
SRR6706288Light intensity 20%105.064
CNP0000432CNS0095592Slightly white alabastrum(diploid) 140.718
CNS0095593Slightly white alabastrum(diploid) 250.369
CNS0095594Slightly white alabastrum(diploid) 333.626
CNS0095595Whole white alabastrum(diploid) 273.688
CNS0095596Whole white alabastrum(diploid) 378.081
CNS0095597Whole white alabastrum(diploid) 483.308
CNS0095598Silvery flower (diploied) 171.780
CNS0095599Silvery flower (diploied) 259.768
CNS0095600Silvery flower (diploied) 355.396
CNS0095601Golden flower (diploid) 155.676
CNS0095602Golden flower (diploid) 263.495
CNS0095603Golden flower (diploid) 357.351
CNS0095604Slightly white alabastrum(tetraploid) 160.198
CNS0095605Slightly white alabastrum(tetraploid) 245.101
CNS0095606Slightly white alabastrum(tetraploid) 389.318
CNS0095607Whole white alabastrum(tetraploid) 141.102
CNS0095608Whole white alabastrum(tetraploid) 265.290
CNS0095609Whole white alabastrum(tetraploid) 3137.141
CNS0095610Silvery flower (tetraploid) 167.815
CNS0095611Silvery flower (tetraploid) 281.128
CNS0095612Silvery flower (tetraploid) 322.898
CNS0095613Golden flower (tetraploid) 136.243
CNS0095614Golden flower (tetraploid) 251.005
CNS0095615Golden flower (tetraploid) 317.410
CRA001975CRR073297Stem 146.785
CRR073298Stem 235.657
CRR073299Stem 332.904
CRR073300Leaf 1117.519
CRR073301Leaf 283.470
CRR073302Leaf 364.579
CRR073303Juvenile bud 1136.236
CRR073304Juvenile bud 2117.874
CRR073305Juvenile bud 3116.898
CRR073306Third green 126.029
CRR073307Third green 217.604
CRR073308Third green 322.304
CRR073309Second white 13.651
CRR073310Second white 22.078
CRR073311Second white 30.613
CRR073312Silver flowering 10.959
CRR073313Silver flowering 21.050
CRR073314Silver flowering 30.767
CRR073315Gold flowering 150.707
CRR073316Gold flowering 258.733
CRR073317Gold flowering 333.742
CRR073318Tawny withering 146.216
CRR073319Tawny withering 254.394
CRR073320Tawny withering 358.575