Gene detail

Detail information of GWHGAAZE029303

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_007042481.1	0	UDP-glycosyltransferase 73B4, putative [Theobroma cacao]
COG	YP_001089633.1	4E-10	UDP-glycosyltransferase, MGT subfamily
Swissprot	tr\|Q9AT54\|SCGT_TOBAC	0	Scopoletin glucosyltransferase
trEMBL	tr\|A0A061E105\|A0A061E105_THECC	0	UDP-glycosyltransferase 73B4, putative {ECO:0000313\|EMBL:EOX98312.1}
TAIR10	AT4G34131.1	4E-148	UDP-glucosyl transferase 73B3

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000009	gene	18041194	18043383	+
GWHAAZE00000009	mRNA	18041194	18043383	+
GWHAAZE00000009	exon	18041194	18041775	+
GWHAAZE00000009	exon	18042487	18043383	+
GWHAAZE00000009	CDS	18041194	18041775	+
GWHAAZE00000009	CDS	18042487	18043383	+

Transcript Sequence
>GWHTAAZE029337 TCGGAGAAAACTAGAACAATGGAACAACAACAGGAGCAGAAGCAGCTCCACATATTCTTCTTCCCCATGATGGCTCGCGGCCACATGATTCCGACCCTCGACATGGCCAAACTCTTCTCCTCTACCACCGCTGCCGCTGTGAAATCCACCATCATCACCACCCCACTCAACGCCCCTGCTTTCTCCACCTCTATCCGCTCCTCCCAACTCGACCTCCAGATCCTCAAATTCCCCTCTGCAGCCGCTGGCCTTCCGGAGGGAGTCGAGAACGTCGACCATTGCACCTCGCACGAGATGGTGATTTCATTCTTCATGGCCACCGCTCTCCTCCAGGAGCCGCTCGAGAGGCTGCTGGGAGAGTTGAGGCCAGATTGTCTCGTCGCAGACATGTTCTTCCCATGGGCCACACGTGCAGCCTCTAGATTTGGTATCCCCAGGCTGGTGTTCCATGGGACGAGCTTCTTCGCGCTTTGCGCATCGGCGAGTATGAGGATGTACAAGCCGTTTAAGGACGTAGAATCAGATTCCGAGCCTTTTGTTTTGCCTAATCTTCCTCATGAGATTAAGCTTCTTCGAACTCAGATTGCTCGAAATGAACGAGAGGAGACTAACGATGACTTCACCGAGTTATTAAATCAAGTTAAGGACTCTGATTTAGAAAGCTATGGAGTTATCATGAACAGCTTCTTAGAGCTTGAACCAGATTACGTGAATCACTATAGAAATGTTTTGAAGAGAAGGGCATGGCATATAGGACCTCTTTCATTGTGTAATAAAGATATTGAAGATAAAGAACTGAGAGGAAAGAAAGCTGCCATTGATGAACATGAGTGCTTGAAATGGTTGGATTCCCAAAAACTTAATTCAGTTATTTATGTTTGTTTTGGAAGCGTGGCCGATATTTCTGCTGCTCAATTATACGAAATTGCAATGGGGCTTGAAGCTTCTGATCAGCCGTTCATATGGGTGGTTAGGAGAAGCCGAAATGAAGGCGAAAACAACATGTGGTTGCCTAACGGATTTGAAGAGAGAACCAAAGGTTGGGGGCTAATTATAAGAGGTTGGGCTCCACAAGTTTTGATACTTGATCACAAAGCAGTTGGTGGTTTTATGACGCATTGTGGGTGGAATTCGACGCTGGAAGGAGTGTGTGCTGGGGTGCCAATGGTGACCTGGCCTGTGTTTGCGGAGCAATTTTACAATGAGAAATTGGTGACTGAGGTTTTGAGAATCGGGGTTAGTGTTGGAGTGAAGGAATGGAATAGAGTGTCATGCGAGGGGATAAGGAGGGAAGTGGTGGAAAAGTCGGTGAAGAAGATAATGGTGGAGGAAGAAGGCAAGGAAATGAGGAGAAGAGCAAAGGAGCTGAAAGTGAAGGCAAAACAGGCTATCGAAGAAGGCGGATCTTCTTATAACGATTTAAGTGCTTTAATTGAAGAATTGAGTTCCTTAGATATGCGTTCAAGAGAATTGAAGTAG

Network for GWHGAAZE029303

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00201.19	UDPGT	219	418	6.50E-23

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K23260	TOGT1	Biosynthesis of secondary metabolites	map01110
K23260	TOGT1	Phenylpropanoid biosynthesis	map00940

Gene Ontology

GO term	Ontology	Name
GO:0016758	molecular_function	transferase activity, transferring hexosyl groups

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.021
	SRR3591706	second leaf	0.047
	SRR3591707	mature leaf	0.000
	SRR3591708	Shoot apex	0.000
	SRR3591709	Stem	0.000
	SRR3591710	White floral bud	0.000
	SRR3591711	White flower	0.066
	SRR3591712	Green floral bud	0.014
	SRR3591713	Yellow flower	0.394
SRP173429	SRR8316895	Juvenile bud stage	0.013
	SRR8316896	Juvenile bud stage	0.000
	SRR8316897	Juvenile bud stage	0.008
	SRR8316894	Third green stage	0.000
	SRR8316900	Third green stage	0.000
	SRR8316901	Third green stage	0.000
	SRR8316898	Complete white stage	0.000
	SRR8316899	Complete white stage	0.000
	SRR8316903	Complete white stage	0.000
	SRR8316902	Silver flowering stage	0.122
	SRR8316904	Silver flowering stage	0.000
	SRR8316905	Silver flowering stage	0.000
	SRR8316906	Gold flowering stage	0.134
	SRR8316907	Gold flowering stage	0.098
	SRR8316908	Gold flowering stage	0.115
SRP132670	SRR6706286	Control	0.008
	SRR6706287	Light intensity 50%	0.017
	SRR6706288	Light intensity 20%	0.004
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.097
	CNS0095593	Slightly white alabastrum(diploid) 2	0.000
	CNS0095594	Slightly white alabastrum(diploid) 3	0.171
	CNS0095595	Whole white alabastrum(diploid) 2	0.156
	CNS0095596	Whole white alabastrum(diploid) 3	0.000
	CNS0095597	Whole white alabastrum(diploid) 4	0.121
	CNS0095598	Silvery flower (diploied) 1	0.024
	CNS0095599	Silvery flower (diploied) 2	0.377
	CNS0095600	Silvery flower (diploied) 3	0.011
	CNS0095601	Golden flower (diploid) 1	0.173
	CNS0095602	Golden flower (diploid) 2	0.012
	CNS0095603	Golden flower (diploid) 3	0.082
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.000
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.000
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.000
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.000
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.000
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.000
	CNS0095610	Silvery flower (tetraploid) 1	0.000
	CNS0095611	Silvery flower (tetraploid) 2	0.000
	CNS0095612	Silvery flower (tetraploid) 3	0.000
	CNS0095613	Golden flower (tetraploid) 1	0.042
	CNS0095614	Golden flower (tetraploid) 2	0.037
	CNS0095615	Golden flower (tetraploid) 3	0.024
CRA001975	CRR073297	Stem 1	0.000
	CRR073298	Stem 2	0.000
	CRR073299	Stem 3	0.035
	CRR073300	Leaf 1	0.000
	CRR073301	Leaf 2	0.000
	CRR073302	Leaf 3	0.000
	CRR073303	Juvenile bud 1	0.000
	CRR073304	Juvenile bud 2	0.000
	CRR073305	Juvenile bud 3	0.000
	CRR073306	Third green 1	0.000
	CRR073307	Third green 2	0.002
	CRR073308	Third green 3	0.000
	CRR073309	Second white 1	0.005
	CRR073310	Second white 2	0.028
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.020
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	0.000
	CRR073316	Gold flowering 2	0.018
	CRR073317	Gold flowering 3	0.004
	CRR073318	Tawny withering 1	0.013
	CRR073319	Tawny withering 2	0.115
	CRR073320	Tawny withering 3	0.005