Gene detail

Detail information of GWHGAAZE029289

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_010066005.1	0	PREDICTED: scopoletin glucosyltransferase-like [Eucalyptus grandis]
COG	YP_001089633.1	3E-10	UDP-glycosyltransferase, MGT subfamily
Swissprot	tr\|Q9AT54\|SCGT_TOBAC	0	Scopoletin glucosyltransferase
trEMBL	tr\|A0A061E105\|A0A061E105_THECC	0	UDP-glycosyltransferase 73B4, putative {ECO:0000313\|EMBL:EOX98312.1}
TAIR10	AT4G34131.1	1E-142	UDP-glucosyl transferase 73B3

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000009	gene	17749285	17754247	+
GWHAAZE00000009	mRNA	17749285	17754247	+
GWHAAZE00000009	exon	17749285	17749857	+
GWHAAZE00000009	exon	17753360	17754247	+
GWHAAZE00000009	CDS	17749285	17749857	+
GWHAAZE00000009	CDS	17753360	17754247	+

Transcript Sequence
>GWHTAAZE029323 ATGAAAGCAATGGGACAACAACAGAAGCAGAAGCAGCTCCACATGTTCTTCTTCCCCATGATGGCTCACGGCCACATGATTCCTACCCTCGACATGGCCAAACTGTTCTCTTCCTCCACCACCGCCGCCGTAAAATCCACCATCATCACCACCCCCCTCAACGCCCCTGCTTTCTCCTCCTCTATCTGCTCCTCCCAAATCGACCTCCAGATCCTTGAATTCCCCTCCGCAGCCGCTGGCCTACCGGAGGGAGTTGAGAACTTAGACCATTGCACCTCAGACGAGATGCATATTACGTTCATCATGGCCACCGCTCTCCTCCAGGACCCGCTCGAAAGGCTACTGGGAGAGTTGAGGCCCGACTGCCTTGTCGCTGACATGTTCTTCCCGTGGGCCACACGTGCAGCCTCAAGATTCGGGATCCCGAGGCTGGTGTTCCACGGGACGAGCTTCTTCTCAATTTGCGCCTGGGAGAGTACGAGGATGTACAAGCCATTTAAGGATGTGGAATCGGATTCCGAGCCTTTCATTTTGCCTAATTTTCCTCATGAAATTAAGCTTCTTCGAACCCAGCTTGGTCAACATGAACGTGAAGAGACTAAAAATGACTTCACAGAGCTATTAAATCAAATGAAAGACTCTGATTCAGAAAGCTATGGAGTTATTATGAACAGCTTCTTTGAGCTTGAACCAGATTACGTGAATTACTACAGAAAAGTTTTGAAGAGAAAGGCGTGGCACATAGGACCTCTTTCATTGTGTAATAAAGATATTGAAGATAAAGCAGTGAGAGAAAAGAAAGCTGCCATTGATGAACACGAGTGTTTGAAATGGCTCGATTACCATAAACCCAATTCAGTTATCTATGTTTGTTTTGGCACTGTTGCCAGTATTTCTGCTACTCAATTATACGAAATCGCGATGGGGCTTGAAGGTTCTGATCAGCCGTTCATATGGGTGGTGAGGAGAAGCAGAAATGAAACAGAAAATGACATGTCGTTACCTGACGGATTTGAAGAGAGAACGAAAGGGAGGGGGCTAGTTATAAGAGGGTGGGCCCCACAGGTGTTGTTACTTGATCACGAAGCAGTGGGCGGTTTTGTGACGCATTGTGGGTGGAATTCGACACTAGAAGGAGTGTGTGCTGGTGTGCCAATGGTGACCTGGCCTGTGTTCGCGGAGCAATTTTACAATGAGAAATTGGTGACTGAAATTTTGAGAATCGGGGTTAGTGTCGGAGTGAAGGAATGGAGTAGAGTGGCAAACGAGGGGATAAGGAGGGAAGTGGTGGAAAAGGCGGTGAAGAGGATAATGGTGGAGGAAGAAGGCAAGGAAATGAGGAGAAGAGCGAAGGAGCTGAAAGAGAAGGCAAAGCAGGCTATCGAAGAAGGCGGATCTTCTTATAAGGATTTGAGTGCTTTAATTGAAGAATTGAGTTCCTTAGATATGCATGCAAGATAA

Network for GWHGAAZE029289

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00201.19	UDPGT	280	416	1.90E-22

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K23260	TOGT1	Biosynthesis of secondary metabolites	map01110
K23260	TOGT1	Phenylpropanoid biosynthesis	map00940

Gene Ontology

GO term	Ontology	Name
GO:0016758	molecular_function	transferase activity, transferring hexosyl groups

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.000
	SRR3591706	second leaf	4.417
	SRR3591707	mature leaf	9.950
	SRR3591708	Shoot apex	0.836
	SRR3591709	Stem	0.141
	SRR3591710	White floral bud	8.531
	SRR3591711	White flower	5.329
	SRR3591712	Green floral bud	2.027
	SRR3591713	Yellow flower	5.478
SRP173429	SRR8316895	Juvenile bud stage	0.431
	SRR8316896	Juvenile bud stage	0.231
	SRR8316897	Juvenile bud stage	0.141
	SRR8316894	Third green stage	0.122
	SRR8316900	Third green stage	0.815
	SRR8316901	Third green stage	0.825
	SRR8316898	Complete white stage	0.514
	SRR8316899	Complete white stage	0.650
	SRR8316903	Complete white stage	0.471
	SRR8316902	Silver flowering stage	0.335
	SRR8316904	Silver flowering stage	0.247
	SRR8316905	Silver flowering stage	0.195
	SRR8316906	Gold flowering stage	0.508
	SRR8316907	Gold flowering stage	0.093
	SRR8316908	Gold flowering stage	4.977
SRP132670	SRR6706286	Control	1.104
	SRR6706287	Light intensity 50%	1.663
	SRR6706288	Light intensity 20%	1.835
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.444
	CNS0095593	Slightly white alabastrum(diploid) 2	0.164
	CNS0095594	Slightly white alabastrum(diploid) 3	0.311
	CNS0095595	Whole white alabastrum(diploid) 2	0.655
	CNS0095596	Whole white alabastrum(diploid) 3	0.306
	CNS0095597	Whole white alabastrum(diploid) 4	0.155
	CNS0095598	Silvery flower (diploied) 1	0.117
	CNS0095599	Silvery flower (diploied) 2	0.296
	CNS0095600	Silvery flower (diploied) 3	0.529
	CNS0095601	Golden flower (diploid) 1	0.430
	CNS0095602	Golden flower (diploid) 2	0.297
	CNS0095603	Golden flower (diploid) 3	0.316
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.198
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.264
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.437
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.090
	CNS0095608	Whole white alabastrum(tetraploid) 2	1.032
	CNS0095609	Whole white alabastrum(tetraploid) 3	1.296
	CNS0095610	Silvery flower (tetraploid) 1	4.766
	CNS0095611	Silvery flower (tetraploid) 2	5.423
	CNS0095612	Silvery flower (tetraploid) 3	3.211
	CNS0095613	Golden flower (tetraploid) 1	7.014
	CNS0095614	Golden flower (tetraploid) 2	5.608
	CNS0095615	Golden flower (tetraploid) 3	2.233
CRA001975	CRR073297	Stem 1	0.088
	CRR073298	Stem 2	0.098
	CRR073299	Stem 3	0.034
	CRR073300	Leaf 1	0.546
	CRR073301	Leaf 2	0.501
	CRR073302	Leaf 3	0.841
	CRR073303	Juvenile bud 1	0.710
	CRR073304	Juvenile bud 2	2.463
	CRR073305	Juvenile bud 3	0.603
	CRR073306	Third green 1	1.428
	CRR073307	Third green 2	0.496
	CRR073308	Third green 3	0.573
	CRR073309	Second white 1	0.218
	CRR073310	Second white 2	0.541
	CRR073311	Second white 3	0.057
	CRR073312	Silver flowering 1	0.357
	CRR073313	Silver flowering 2	0.285
	CRR073314	Silver flowering 3	0.372
	CRR073315	Gold flowering 1	0.489
	CRR073316	Gold flowering 2	1.538
	CRR073317	Gold flowering 3	1.437
	CRR073318	Tawny withering 1	0.032
	CRR073319	Tawny withering 2	0.079
	CRR073320	Tawny withering 3	0.000