Gene detail

Detail information of GWHGAAZE029131

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	EYU44212.1	5.3068E-122	hypothetical protein MIMGU_mgv1a020440mg, partial [Erythranthe guttata]
COG	YP_001958461.1	6E-24	hypothetical protein Aasi_1443
Swissprot	tr\|Q9SCZ4\|FERON_ARATH	4E-107	Receptor-like protein kinase FERONIA (Precursor)
trEMBL	tr\|A0A022RUL7\|A0A022RUL7_ERYGU	2E-122	Uncharacterized protein {ECO:0000313\|EMBL:EYU44212.1} (Fragment)
TAIR10	AT3G51550.1	2E-94	Malectin/receptor-like protein kinase family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000009	gene	8379581	8381958	+
GWHAAZE00000009	mRNA	8379581	8381958	+
GWHAAZE00000009	exon	8379581	8380854	+
GWHAAZE00000009	exon	8381664	8381958	+
GWHAAZE00000009	CDS	8379581	8380854	+
GWHAAZE00000009	CDS	8381664	8381958	+

Transcript Sequence
>GWHTAAZE029165 GCAAACCTTGGCGAGAATTTAGAAGTATTAACACCGCAACAACAACAACAGGAAGTGAACCTTGACGAAGATTCAAGCATACCACCGTCGTTGAAATCAGAACAATTATGCCGTCATTTTTCACTTGCTCATATCCTATTGGCCACCAACAACTTTGACGATGCATTAATCATTGGTCACGGTGGATTTGGGAAGGTGTACAAAGGGGTCATCGATGATGGGACAGTTACTGTTGCCATAAAGAGGTTAAGTCCTACGTCCAAACAAGGGGCACCCCAATTTTGGACAGAGGTGGAGTTGCTTTCTAAATTTCGGCACAGCCATCTTGTTTCACTAATTGGTTACTGTAACAATCACGATGAGATGATACTTGTTTATGAGTACATGGCTCGTGGATCCCTCGCGGATCATCTGTACAAACTTGGCCCGAATGGTAACAATTCTCTAACCTTATCTTGGGTGCAGCGCTTAAAGATTTGCATTGGGGCAGCACAGGGTTTGGATTACCTTCATACTGGTACGGGTATCCATGATAGGGTCATACATCGTGACTTGAAGAGCTCAAACATTCTATTGGATGATAGCTGGGCAGCTAAGGTATCAGATTTTGGGCTGTCTAAAATTGGCCCCGCAAATCAGTCCGCCTCATCACATGTCAGTACCAACGTCAAAGGCACATTTGGGTATGTGGATCCTGAGTATTTGGTGACCCATAGACTCACTCGAAAGTCTGACGTTTACTCCTTTGGCGTAGTCTTGTTAGAAGTGTTGTCCGGGAGGCGGGCTGTAGATTTAAAACGCTGTGAGGAGCAGTGGGGTCTTGCTGGATGGGCCAAAGAATGCATAAAGAAAGGAGAACTAGATCAGATTATTGACCCGAATTTGAGATGGCAAATCTTGCCAAATTCTTTGACAGCATTTGTGAAAATAGCAGATCAATGCTTGCATTATCGTTCGAAAAAACGGCCTACAATGGCTGAGGTGGTGGCCTCACTTGAGTCTGCGTTGGCATTGCAAGAGAGAAGAGATTCTTCAATGTTTGAGGCAGATTTTTTTAATTTGGGAGGGACTTTTGACAACCAAGAGAATCTGGATAATTCCTTACTAGAATCCGAGGTGAATAATGGTGGTGATGGTGAGCATCTGGGTGAAGAGACAGATAATATTTTGTCATCTGGTGAGGCAAGCAATTTGCAGTCGCGTGTAAGGCCTGCCAGAATGACAACGTTCAAAAGGATGGCACGGCTGTCTTTCTTAATTTGGAAAATCTCGAGTTTAGGTCATTTAAATGATGCTCATACTAAGAAATTTTCTTTCGTTGGGCGTGCAGATCCAATCAAGCGTGCAACCTTGGATTGGGAACAGCGTTATAAAATCATTAGAGGTGTTGCTCGGGGGCTTCTTTATCTTCATGAAGATTCTCCCGTGCGGATTATTCATCGTCATGTCAAACCTAGCAACATTCTATTAGATAAAGAGATGAACCCGAAAATTTCTGATTTTTGCTTAGCAAAGTTGTGTGATTGGAAAGGAAGTGAAGTGTCTGTAACCATTGTTGTGGGGACTTAG

Network for GWHGAAZE029131

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF07714.18	PK_Tyr_Ser-Thr	58	332	1.70E-48
PF00069.26	Pkinase	448	512	2.30E-11

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	RLK-Pelle_CrRLK1L-1

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0004672	molecular_function	protein kinase activity
GO:0005524	molecular_function	ATP binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	1.430
	SRR3591706	second leaf	0.203
	SRR3591707	mature leaf	0.084
	SRR3591708	Shoot apex	0.632
	SRR3591709	Stem	2.963
	SRR3591710	White floral bud	0.165
	SRR3591711	White flower	0.505
	SRR3591712	Green floral bud	0.229
	SRR3591713	Yellow flower	0.320
SRP173429	SRR8316895	Juvenile bud stage	0.073
	SRR8316896	Juvenile bud stage	0.172
	SRR8316897	Juvenile bud stage	1.366
	SRR8316894	Third green stage	0.050
	SRR8316900	Third green stage	0.000
	SRR8316901	Third green stage	0.076
	SRR8316898	Complete white stage	0.030
	SRR8316899	Complete white stage	0.175
	SRR8316903	Complete white stage	0.000
	SRR8316902	Silver flowering stage	0.012
	SRR8316904	Silver flowering stage	0.000
	SRR8316905	Silver flowering stage	0.000
	SRR8316906	Gold flowering stage	0.103
	SRR8316907	Gold flowering stage	0.115
	SRR8316908	Gold flowering stage	1.144
SRP132670	SRR6706286	Control	0.061
	SRR6706287	Light intensity 50%	0.055
	SRR6706288	Light intensity 20%	0.001
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.021
	CNS0095593	Slightly white alabastrum(diploid) 2	0.093
	CNS0095594	Slightly white alabastrum(diploid) 3	0.038
	CNS0095595	Whole white alabastrum(diploid) 2	0.125
	CNS0095596	Whole white alabastrum(diploid) 3	0.000
	CNS0095597	Whole white alabastrum(diploid) 4	0.000
	CNS0095598	Silvery flower (diploied) 1	0.200
	CNS0095599	Silvery flower (diploied) 2	0.104
	CNS0095600	Silvery flower (diploied) 3	0.065
	CNS0095601	Golden flower (diploid) 1	0.213
	CNS0095602	Golden flower (diploid) 2	0.172
	CNS0095603	Golden flower (diploid) 3	0.170
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.112
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.057
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.431
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.142
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.036
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.066
	CNS0095610	Silvery flower (tetraploid) 1	0.445
	CNS0095611	Silvery flower (tetraploid) 2	0.094
	CNS0095612	Silvery flower (tetraploid) 3	0.344
	CNS0095613	Golden flower (tetraploid) 1	0.267
	CNS0095614	Golden flower (tetraploid) 2	0.697
	CNS0095615	Golden flower (tetraploid) 3	0.082
CRA001975	CRR073297	Stem 1	0.000
	CRR073298	Stem 2	0.083
	CRR073299	Stem 3	0.008
	CRR073300	Leaf 1	0.000
	CRR073301	Leaf 2	0.000
	CRR073302	Leaf 3	0.032
	CRR073303	Juvenile bud 1	0.000
	CRR073304	Juvenile bud 2	0.000
	CRR073305	Juvenile bud 3	0.041
	CRR073306	Third green 1	0.027
	CRR073307	Third green 2	0.000
	CRR073308	Third green 3	0.022
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.000
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.004
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	0.116
	CRR073316	Gold flowering 2	0.000
	CRR073317	Gold flowering 3	0.107
	CRR073318	Tawny withering 1	0.797
	CRR073319	Tawny withering 2	0.613
	CRR073320	Tawny withering 3	0.013