Gene detail

Detail information of GWHGAAZE029026

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_011079296.1	0	PREDICTED: NADPH--cytochrome P450 reductase-like [Sesamum indicum]
COG	NP_390594.1	9E-18	bifunctional P-450/NADPH-P450 reductase 2
Swissprot	tr\|Q05001\|NCPR_CATRO	0	NADPH--cytochrome P450 reductase
trEMBL	tr\|F6GXH0\|F6GXH0_VITVI	0	NADPH--cytochrome P450 reductase {ECO:0000256\|PIRNR:PIRNR000208}
TAIR10	AT4G30210.2	3E-140	P450 reductase 2

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000009	gene	2626839	2632420	+
GWHAAZE00000009	mRNA	2626839	2632420	+
GWHAAZE00000009	exon	2626839	2627180	+
GWHAAZE00000009	exon	2627818	2627877	+
GWHAAZE00000009	exon	2627993	2628069	+
GWHAAZE00000009	exon	2628616	2628673	+
GWHAAZE00000009	exon	2628956	2629039	+
GWHAAZE00000009	exon	2629160	2629263	+
GWHAAZE00000009	exon	2629341	2629348	+
GWHAAZE00000009	exon	2629429	2629498	+
GWHAAZE00000009	exon	2629642	2629788	+
GWHAAZE00000009	exon	2629927	2630019	+
GWHAAZE00000009	exon	2630639	2630831	+
GWHAAZE00000009	exon	2630928	2631011	+
GWHAAZE00000009	exon	2631100	2631186	+
GWHAAZE00000009	exon	2631352	2631447	+
GWHAAZE00000009	exon	2632061	2632183	+
GWHAAZE00000009	exon	2632295	2632420	+
GWHAAZE00000009	CDS	2626839	2627180	+
GWHAAZE00000009	CDS	2627818	2627877	+
GWHAAZE00000009	CDS	2627993	2628069	+
GWHAAZE00000009	CDS	2628616	2628673	+
GWHAAZE00000009	CDS	2628956	2629039	+
GWHAAZE00000009	CDS	2629160	2629263	+
GWHAAZE00000009	CDS	2629341	2629348	+
GWHAAZE00000009	CDS	2629429	2629498	+
GWHAAZE00000009	CDS	2629642	2629788	+
GWHAAZE00000009	CDS	2629927	2630019	+
GWHAAZE00000009	CDS	2630639	2630831	+
GWHAAZE00000009	CDS	2630928	2631011	+
GWHAAZE00000009	CDS	2631100	2631186	+
GWHAAZE00000009	CDS	2631352	2631447	+
GWHAAZE00000009	CDS	2632061	2632183	+
GWHAAZE00000009	CDS	2632295	2632420	+

Transcript Sequence
>GWHTAAZE029060 ATGCAATCCGAGTCGATGAAGTTATCGCCCTTCGACTTGATGTCCGCCATTTTGAGAGGAGGCAGCATGGGCCAGTCTTCTGATTCGGGCGAGTCGGTTTTCGCGACGTTGGTGGATAATAAGGAGCTTATGATGATACTGACTACGTCGGTCGCGGTTTTGATCGGATGCGCGGTTGTTTTGGTGTGGAAGAGATCGTCCGGACGGAGATCGGCGAAAGTATTTGAGGCACCGAAGGTTGTGACGGCGAAGGTGGAGCCGGAGGTGGAGGTAGATGACGGTAAGAAGAAGGTTACCATCTTTTACGGGACTCAGACTGGTACCGCGGAAGGTTTTGCCAAGGCACTTGCCGATGAAGCCAAAGTTCGCTATGAAAAGGCAGCATTTAAAGTGGTGGATTTGGACGACTATGCTGCCGATGACGAGGAGTATGAGGACAAGTTGAAGAAAGAAAATATGGCCTTTTTCTTCTTAGCTACATATGGAGATGGTGAGCCAACTGACAATGCTGCTAGATTCTACAAGTGGTTTACAGAGGGAAAAGAAAAGGGGGATTCGCTTAAGAATCTTGAATACGCGGTATTTGGCCTAGGCAACAGGCAATATGAGCATTTCAACAAGATTGCGAAGGAGGTGGACAATACGATTTTTGATCAGGGTATGTTCCCTGCACATTTCACCTTCTATTTTGATGAGCTTGTTGTGCATTTTACAATTGTTGAATGGTTATCTGGTGGAAAGCGCATTGTTCCGGTGGGTCTTGGAGATGATGATCAATGCATTGAAGATGACTTTGCCGCATGGCGGGAGTTGTTGTGGCCGGAGTTAGATCAATTGCTTCGGGGTGATGATGATGCAACTGTTGCTACTCCTTACACTGCTACTGTTTTGGAATACTGGGTTGTATTGCACGCACGAAACAGATACATCTCTGCTCGATCAGAGCTTGAAGCTAACGTGGCTGTGAAAAGGGAACTTCATACCCCCGCATCAGATCGTTCTTGCACTCATTTGGAATTTGACATTTCTCACTCCGGACTTGCCGAGAATCTGATTGAGACCGTGGAGGCGGCTGAGAAATTGTTAGGTGTATCGCCCGACACTTATTTCTCCATTCATACCGACAAAGAGGACGGAACACCAATTAGTGGAAGCTCATTGCCACCTCCATTCCCACCTTGCACCTTAAGAACCGCACTAACCAAATACGCGGACCTTCTTAGTTCTCCCAAAAAGTCTGCTCTACTTGCTCTAGCAGCCCACACCTCAGACCCTACTGAAGCTGATCGATTAAGATATCTTGCATCCCCTGCTGGAAAGGATGAGTATGCTCAGTGGGTAGTTTCAAATCAGAGAAGCCTCCTTGAGGTCATGGCAGAATTCCCATCAGCCAAGCCCTCGCTAGGACATGGCACCATCGCGAATCCATGTTACTTGTGCATTAGTTTACGAAAAACACCTACAGGAAGGATTCACAAAGGAGTGTGCTCTACTTGGATGAAGGATTATATCTATGAGGGTGAGCTAAACAATTTTGTCGAAACCGGGGCACTTACTGAGCTAGTTGTGGCATTTTCGCGCGAAGGCCCTACTAAGGAATACGTGCAACATAAGATGGCGCAGAAGGCTTCGGATATATGGAAGTTGATTTCGGAGGGAGCATATGTTTATGTTTGTGGCGATGCCAAAGGCATGGCCAGGGACGCCCACCGAACTCTCCACACTATCGCCAAGAGCAGGTATGTTCGGTAA

Network for GWHGAAZE029026

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00258.26	Flavodoxin_1	100	268	5.20E-26
PF00667.21	FAD_binding_1	315	470	1.10E-29

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0055114	biological_process	oxidation-reduction process
GO:0016491	molecular_function	oxidoreductase activity
GO:0010181	molecular_function	FMN binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	13.085
	SRR3591706	second leaf	14.547
	SRR3591707	mature leaf	7.525
	SRR3591708	Shoot apex	5.187
	SRR3591709	Stem	19.945
	SRR3591710	White floral bud	13.112
	SRR3591711	White flower	17.971
	SRR3591712	Green floral bud	3.074
	SRR3591713	Yellow flower	24.726
SRP173429	SRR8316895	Juvenile bud stage	4.907
	SRR8316896	Juvenile bud stage	8.271
	SRR8316897	Juvenile bud stage	2.312
	SRR8316894	Third green stage	3.060
	SRR8316900	Third green stage	5.073
	SRR8316901	Third green stage	6.023
	SRR8316898	Complete white stage	4.346
	SRR8316899	Complete white stage	9.626
	SRR8316903	Complete white stage	7.227
	SRR8316902	Silver flowering stage	8.263
	SRR8316904	Silver flowering stage	8.365
	SRR8316905	Silver flowering stage	6.973
	SRR8316906	Gold flowering stage	28.704
	SRR8316907	Gold flowering stage	23.409
	SRR8316908	Gold flowering stage	44.477
SRP132670	SRR6706286	Control	5.417
	SRR6706287	Light intensity 50%	9.100
	SRR6706288	Light intensity 20%	8.354
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	6.848
	CNS0095593	Slightly white alabastrum(diploid) 2	8.388
	CNS0095594	Slightly white alabastrum(diploid) 3	9.916
	CNS0095595	Whole white alabastrum(diploid) 2	7.716
	CNS0095596	Whole white alabastrum(diploid) 3	1.160
	CNS0095597	Whole white alabastrum(diploid) 4	7.212
	CNS0095598	Silvery flower (diploied) 1	6.166
	CNS0095599	Silvery flower (diploied) 2	5.381
	CNS0095600	Silvery flower (diploied) 3	9.878
	CNS0095601	Golden flower (diploid) 1	6.706
	CNS0095602	Golden flower (diploid) 2	13.900
	CNS0095603	Golden flower (diploid) 3	14.936
	CNS0095604	Slightly white alabastrum(tetraploid) 1	2.316
	CNS0095605	Slightly white alabastrum(tetraploid) 2	1.218
	CNS0095606	Slightly white alabastrum(tetraploid) 3	6.887
	CNS0095607	Whole white alabastrum(tetraploid) 1	3.175
	CNS0095608	Whole white alabastrum(tetraploid) 2	2.644
	CNS0095609	Whole white alabastrum(tetraploid) 3	3.380
	CNS0095610	Silvery flower (tetraploid) 1	12.435
	CNS0095611	Silvery flower (tetraploid) 2	3.436
	CNS0095612	Silvery flower (tetraploid) 3	24.046
	CNS0095613	Golden flower (tetraploid) 1	14.923
	CNS0095614	Golden flower (tetraploid) 2	17.615
	CNS0095615	Golden flower (tetraploid) 3	16.283
CRA001975	CRR073297	Stem 1	4.010
	CRR073298	Stem 2	3.214
	CRR073299	Stem 3	2.425
	CRR073300	Leaf 1	5.849
	CRR073301	Leaf 2	4.994
	CRR073302	Leaf 3	4.401
	CRR073303	Juvenile bud 1	3.392
	CRR073304	Juvenile bud 2	6.799
	CRR073305	Juvenile bud 3	7.283
	CRR073306	Third green 1	31.393
	CRR073307	Third green 2	11.466
	CRR073308	Third green 3	21.007
	CRR073309	Second white 1	10.192
	CRR073310	Second white 2	21.749
	CRR073311	Second white 3	23.229
	CRR073312	Silver flowering 1	48.960
	CRR073313	Silver flowering 2	32.894
	CRR073314	Silver flowering 3	50.713
	CRR073315	Gold flowering 1	6.994
	CRR073316	Gold flowering 2	15.710
	CRR073317	Gold flowering 3	7.087
	CRR073318	Tawny withering 1	25.786
	CRR073319	Tawny withering 2	39.547
	CRR073320	Tawny withering 3	31.301