Gene detail

Detail information of GWHGAAZE028440

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	KDP34144.1	0	hypothetical protein JCGZ_07715 [Jatropha curcas]
COG	YP_006921214.1	7E-34	serine/threonine-protein kinase Sps
Swissprot	tr\|Q683C9\|AUR2_ARATH	0	Serine/threonine-protein kinase Aurora-2
trEMBL	tr\|A0A067KQQ5\|A0A067KQQ5_JATCU	0	Uncharacterized protein {ECO:0000313\|EMBL:KDP34144.1}
TAIR10	AT4G32830.1	5E-154	ataurora1

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000008	gene	56670860	56675110	+
GWHAAZE00000008	mRNA	56670860	56675110	+
GWHAAZE00000008	exon	56670860	56670913	+
GWHAAZE00000008	exon	56672066	56672182	+
GWHAAZE00000008	exon	56672695	56672841	+
GWHAAZE00000008	exon	56672927	56673022	+
GWHAAZE00000008	exon	56673221	56673316	+
GWHAAZE00000008	exon	56673419	56673515	+
GWHAAZE00000008	exon	56674033	56674150	+
GWHAAZE00000008	exon	56674689	56674761	+
GWHAAZE00000008	exon	56675009	56675110	+
GWHAAZE00000008	CDS	56670860	56670913	+
GWHAAZE00000008	CDS	56672066	56672182	+
GWHAAZE00000008	CDS	56672695	56672841	+
GWHAAZE00000008	CDS	56672927	56673022	+
GWHAAZE00000008	CDS	56673221	56673316	+
GWHAAZE00000008	CDS	56673419	56673515	+
GWHAAZE00000008	CDS	56674033	56674150	+
GWHAAZE00000008	CDS	56674689	56674761	+
GWHAAZE00000008	CDS	56675009	56675110	+

Transcript Sequence
>GWHTAAZE028474 ATGCCAATGGGAATCGCAGCAGAGATGCAGGCAGAGGATCTTCATAATAATAAGGCTTCTTCAGAGGCTGCAGCATCGGAAAAAAGAAGATGGACCCTCAATGACTTTGACATTGGAAAGCCTCTTGGAAGAGGAAAATTCGGCCACGTCTATCTAGCAAGAGAAAAGAGGAGCAATCATGTAGTGGCACTAAAGGTGCTGTTTAAGAGCCAGCTGAAGCAGTCTCAGGTGGAGCATCAGCTTCGCCGTGAAGTTGAAATTCAAAGCCATCTCCGCCACCCTAATATTCTACGCCTTTATGGCTACTTCTATGATCAGAAACGAGTTTATTTGATCTTGGAGTATGCTGCCAAGGGTGAACTCTACAAGGAGCTACAGAAATGCAAATACTTTAGCGAAAGGCGGGCTGCTACGTATGTCGCATCTCTTGCTCGGGCCCTCATATATTGCCATGGAAAGCACGTTATACATAGGGATATCAAGCCAGAGAATCTTTTAGTTGGTGCACAGGGGGAACTTAAGATTGCAGACTTTGGTTGGTCAGTACACACATTTGACCGCAGGCGGACCATGTGTGGCACCCTTGATTACCTTCCACCTGAGATGGTGGAGAGTGTGGAACACGATGCCAGCGTGGATATTTGGAGCCTCGGTGTTCTGTGCTATGAGTTTCTCTACGGTGTCCCACCCTTTGAAGCAAAGGAACACTCGGATACATATAGAAGGATTGTTCAAGTCGATTTGAAGTTCCCTCCAAAGCCAATAGTCTCCTCAACTGCAAAGGACCTCATTAGTCAGATGCTTGTAAAGGAGACTTCGCAGCGCTTGGCGCTACACAAGGTCCTTGAGCATCCATGGATTATTCAGAATGCCGATCCCACCGGTGTCTACAAGGGTTAA

Network for GWHGAAZE028440

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00069.26	Pkinase	38	287	6.80E-73

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	Aur

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0004672	molecular_function	protein kinase activity
GO:0005524	molecular_function	ATP binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	56.737
	SRR3591706	second leaf	9.064
	SRR3591707	mature leaf	3.007
	SRR3591708	Shoot apex	100.466
	SRR3591709	Stem	16.498
	SRR3591710	White floral bud	10.962
	SRR3591711	White flower	5.331
	SRR3591712	Green floral bud	7.737
	SRR3591713	Yellow flower	0.940
SRP173429	SRR8316895	Juvenile bud stage	18.598
	SRR8316896	Juvenile bud stage	21.426
	SRR8316897	Juvenile bud stage	16.002
	SRR8316894	Third green stage	6.932
	SRR8316900	Third green stage	5.484
	SRR8316901	Third green stage	8.130
	SRR8316898	Complete white stage	2.381
	SRR8316899	Complete white stage	6.791
	SRR8316903	Complete white stage	2.747
	SRR8316902	Silver flowering stage	0.898
	SRR8316904	Silver flowering stage	1.553
	SRR8316905	Silver flowering stage	0.328
	SRR8316906	Gold flowering stage	0.908
	SRR8316907	Gold flowering stage	1.518
	SRR8316908	Gold flowering stage	1.411
SRP132670	SRR6706286	Control	9.320
	SRR6706287	Light intensity 50%	8.854
	SRR6706288	Light intensity 20%	9.435
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	15.329
	CNS0095593	Slightly white alabastrum(diploid) 2	11.155
	CNS0095594	Slightly white alabastrum(diploid) 3	14.604
	CNS0095595	Whole white alabastrum(diploid) 2	10.064
	CNS0095596	Whole white alabastrum(diploid) 3	6.614
	CNS0095597	Whole white alabastrum(diploid) 4	7.421
	CNS0095598	Silvery flower (diploied) 1	7.949
	CNS0095599	Silvery flower (diploied) 2	10.945
	CNS0095600	Silvery flower (diploied) 3	4.081
	CNS0095601	Golden flower (diploid) 1	3.495
	CNS0095602	Golden flower (diploid) 2	2.947
	CNS0095603	Golden flower (diploid) 3	2.449
	CNS0095604	Slightly white alabastrum(tetraploid) 1	17.873
	CNS0095605	Slightly white alabastrum(tetraploid) 2	16.987
	CNS0095606	Slightly white alabastrum(tetraploid) 3	28.601
	CNS0095607	Whole white alabastrum(tetraploid) 1	13.190
	CNS0095608	Whole white alabastrum(tetraploid) 2	9.435
	CNS0095609	Whole white alabastrum(tetraploid) 3	15.919
	CNS0095610	Silvery flower (tetraploid) 1	5.346
	CNS0095611	Silvery flower (tetraploid) 2	5.376
	CNS0095612	Silvery flower (tetraploid) 3	4.596
	CNS0095613	Golden flower (tetraploid) 1	2.690
	CNS0095614	Golden flower (tetraploid) 2	2.951
	CNS0095615	Golden flower (tetraploid) 3	1.698
CRA001975	CRR073297	Stem 1	27.514
	CRR073298	Stem 2	23.307
	CRR073299	Stem 3	36.870
	CRR073300	Leaf 1	12.978
	CRR073301	Leaf 2	8.840
	CRR073302	Leaf 3	11.760
	CRR073303	Juvenile bud 1	8.840
	CRR073304	Juvenile bud 2	5.961
	CRR073305	Juvenile bud 3	7.087
	CRR073306	Third green 1	2.409
	CRR073307	Third green 2	4.555
	CRR073308	Third green 3	3.567
	CRR073309	Second white 1	0.640
	CRR073310	Second white 2	1.549
	CRR073311	Second white 3	0.762
	CRR073312	Silver flowering 1	3.111
	CRR073313	Silver flowering 2	2.991
	CRR073314	Silver flowering 3	0.995
	CRR073315	Gold flowering 1	4.007
	CRR073316	Gold flowering 2	1.753
	CRR073317	Gold flowering 3	4.084
	CRR073318	Tawny withering 1	30.918
	CRR073319	Tawny withering 2	29.877
	CRR073320	Tawny withering 3	37.282