Gene detail

Detail information of GWHGAAZE028109

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_011077281.1	0	PREDICTED: exocyst complex component EXO70A1-like [Sesamum indicum]
Swissprot	tr\|Q9LZD3\|E70A1_ARATH	8E-58	Exocyst complex component EXO70A1
trEMBL	tr\|A0A068UVW9\|A0A068UVW9_COFCA	0	Coffea canephora DH200=94 genomic scaffold, scaffold_66 {ECO:0000313\|EMBL:CDP12452.1}
TAIR10	AT4G31540.1	0	exocyst subunit exo70 family protein G1

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000008	gene	40998700	41000154	-
GWHAAZE00000008	mRNA	40998700	41000154	-
GWHAAZE00000008	exon	40998700	41000154	-
GWHAAZE00000008	CDS	40998700	41000154	-

Transcript Sequence
>GWHTAAZE028143 ATGTCGTTGCCGTCCTCATCGGGTCAAGCTTGTATTGCCCCATCAAGTTTACCCGTTTCAGTTATTCAGAAACTACAGGCGATTCTTGGGAGACTAATTGCTAATAAACGACTCGAAAATTGCATTTCTATCTATGTTGAAGTTCGTAGCTCGAATGTTAGAGCAAGTTTGCAGGCACTCAATTTGGATTACCTCGGGATTTCGGTTTCCGAGTTCAATAATAATGTGCAGAGCATAGAGGGTTATATTGCTCAATGGAGTAAGCATTTGGAGTTTGCAGTGAAGCATTTACTTGAGGCCGAATACAAACTTTGCGGTGATGTTTTCGAGAGGATAGGACTGGAGCAGTGGACGGGTTGTTTTGCAAAGATAGCTGCGCAAGCTGGTATTCTTGCATTCCTTCACTTCGGAAAAATGGTAACCGAGAGCAGAAAAGATCCCATTAAGTTATTGAAGCTGTTGGACATTTTTGCATCGTTGAACAAACTAAGATTGGATTTTAACCGCCTTTTTGGGGGAGCGTCTTGTGCTGAAATTCAAAATCTGACTAGGGATCTCATCAAGAGGGTGATCGAAGGGGCATGTGAAATTTTCTGGGAGCTTTTGGTTCAAGTCGAATTGCAGCGTCAAAGTCCACCTCCTTCAGATGGTAGCATTCCGAGGCTCGTCAGCTTTATCACCGGTTACTGTAATCAGCTTCTCGGGGATGATTATAAGCCGATCCTTACCCAAGTTTTGGCCATCGAACGAAGTTGGAAACATGAAGTATTCCAAGAGAGGCTCCTTATCAATGAGCTTTTGAATTTAATCAAAGCCATTGAGGTGAATTTAGAGACATGGTCAAAGGCATATGAGGACGTTGTATTGTCCTATCTTTTCATGATGAACAATCACGGCTACCTATATAAGCATTTGAAAGGCACAAAGCTCGGGGGTCTATTAGGCGATTCTTGGCTAAGAGAACAGGAGCAGTACAAAGAATACTACTCCACTATCTTCCTGAGAGAGACTTGGGGGAAACTTCCGACTCTCTTGAGTAGGGAAGGTTTGATTATGTTCTCTCGTGGGCGTGCTACTGCTCGAGATCTTGTTAAAAAACGGCTAAAGGTTTTTAATGAAGCGTTCGATGAAATGTACAAAAAGCAGAGCAATTGGGTTGTGTCAGAAAAGGATCTGCGCGAGAAAACGTGCCAGATAATAGTGCAGGCAATTGTGCCCGTTTACCGAAGCTACATGCAGAATTACGGGCCATTAGTAGAACAAGATGCAAGTGCCAGCAAGTATGCCAAGTACACAGCGCAGTCTTTAGAGAAACTCCTCAGCACCCTTTTTCAGCCGAAACCCGTTCGAGCTATTAGTTTTAAAGCCAGGCAACCCAGTGGGAAATTCAATAATGGGGTCGAACCGAATCAGTATAATGCTCAATCTTCTCCTACTGTTACAGCTGTAGAATAA

Network for GWHGAAZE028109

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03081.16	Exo70	85	441	8.50E-89

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K07195	EXOC7, EXO70	Insulin signaling pathway	map04910

Gene Ontology

GO term	Ontology	Name
GO:0006887	biological_process	exocytosis
GO:0000145	cellular_component	exocyst

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	8.588
	SRR3591706	second leaf	6.604
	SRR3591707	mature leaf	5.987
	SRR3591708	Shoot apex	9.162
	SRR3591709	Stem	11.348
	SRR3591710	White floral bud	11.439
	SRR3591711	White flower	15.799
	SRR3591712	Green floral bud	12.433
	SRR3591713	Yellow flower	8.782
SRP173429	SRR8316895	Juvenile bud stage	8.412
	SRR8316896	Juvenile bud stage	10.743
	SRR8316897	Juvenile bud stage	5.402
	SRR8316894	Third green stage	5.148
	SRR8316900	Third green stage	12.366
	SRR8316901	Third green stage	11.881
	SRR8316898	Complete white stage	4.654
	SRR8316899	Complete white stage	15.567
	SRR8316903	Complete white stage	6.968
	SRR8316902	Silver flowering stage	3.994
	SRR8316904	Silver flowering stage	5.692
	SRR8316905	Silver flowering stage	2.316
	SRR8316906	Gold flowering stage	7.728
	SRR8316907	Gold flowering stage	10.891
	SRR8316908	Gold flowering stage	7.901
SRP132670	SRR6706286	Control	14.038
	SRR6706287	Light intensity 50%	14.727
	SRR6706288	Light intensity 20%	15.765
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	9.648
	CNS0095593	Slightly white alabastrum(diploid) 2	4.702
	CNS0095594	Slightly white alabastrum(diploid) 3	8.072
	CNS0095595	Whole white alabastrum(diploid) 2	6.754
	CNS0095596	Whole white alabastrum(diploid) 3	6.649
	CNS0095597	Whole white alabastrum(diploid) 4	6.868
	CNS0095598	Silvery flower (diploied) 1	10.205
	CNS0095599	Silvery flower (diploied) 2	8.868
	CNS0095600	Silvery flower (diploied) 3	12.680
	CNS0095601	Golden flower (diploid) 1	8.249
	CNS0095602	Golden flower (diploid) 2	13.360
	CNS0095603	Golden flower (diploid) 3	13.970
	CNS0095604	Slightly white alabastrum(tetraploid) 1	10.015
	CNS0095605	Slightly white alabastrum(tetraploid) 2	7.133
	CNS0095606	Slightly white alabastrum(tetraploid) 3	20.391
	CNS0095607	Whole white alabastrum(tetraploid) 1	8.009
	CNS0095608	Whole white alabastrum(tetraploid) 2	6.772
	CNS0095609	Whole white alabastrum(tetraploid) 3	11.961
	CNS0095610	Silvery flower (tetraploid) 1	12.805
	CNS0095611	Silvery flower (tetraploid) 2	12.659
	CNS0095612	Silvery flower (tetraploid) 3	12.915
	CNS0095613	Golden flower (tetraploid) 1	5.091
	CNS0095614	Golden flower (tetraploid) 2	8.756
	CNS0095615	Golden flower (tetraploid) 3	6.269
CRA001975	CRR073297	Stem 1	17.015
	CRR073298	Stem 2	15.014
	CRR073299	Stem 3	12.438
	CRR073300	Leaf 1	15.477
	CRR073301	Leaf 2	12.704
	CRR073302	Leaf 3	11.736
	CRR073303	Juvenile bud 1	11.499
	CRR073304	Juvenile bud 2	8.131
	CRR073305	Juvenile bud 3	14.504
	CRR073306	Third green 1	7.229
	CRR073307	Third green 2	5.759
	CRR073308	Third green 3	6.686
	CRR073309	Second white 1	5.502
	CRR073310	Second white 2	8.099
	CRR073311	Second white 3	7.164
	CRR073312	Silver flowering 1	7.804
	CRR073313	Silver flowering 2	5.115
	CRR073314	Silver flowering 3	5.393
	CRR073315	Gold flowering 1	4.095
	CRR073316	Gold flowering 2	11.098
	CRR073317	Gold flowering 3	5.918
	CRR073318	Tawny withering 1	13.129
	CRR073319	Tawny withering 2	10.061
	CRR073320	Tawny withering 3	15.825