Detail information of GWHGAAZE027921


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002275168.10PREDICTED: 26S proteasome non-ATPase regulatory subunit 13 homolog A [Vitis vinifera]
Swissprottr|Q8RWF0|PS13A_ARATH026S proteasome non-ATPase regulatory subunit 13 homolog A
trEMBLtr|F6HT17|F6HT17_VITVI0Putative uncharacterized protein {ECO:0000313|EMBL:CCB57827.1}
TAIR10AT5G45620.10Proteasome component (PCI) domain protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene3187731731887879+
GWHAAZE00000008mRNA3187731731887879+
GWHAAZE00000008exon3187731731877466+
GWHAAZE00000008exon3187762131877702+
GWHAAZE00000008exon3187988831879958+
GWHAAZE00000008exon3188118331881629+
GWHAAZE00000008exon3188351331883593+
GWHAAZE00000008exon3188547531885671+
GWHAAZE00000008exon3188671831886817+
GWHAAZE00000008exon3188769431887879+
GWHAAZE00000008CDS3187731731877466+
GWHAAZE00000008CDS3187762131877702+
GWHAAZE00000008CDS3187988831879958+
GWHAAZE00000008CDS3188118331881629+
GWHAAZE00000008CDS3188351331883593+
GWHAAZE00000008CDS3188547531885671+
GWHAAZE00000008CDS3188671831886817+
GWHAAZE00000008CDS3188769431887879+
Transcript Sequence

Network for GWHGAAZE027921

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01399.28PCI2893949.30E-11
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03039PSMD13, RPN9 Proteasome map03050

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf110.944
SRR3591706second leaf57.736
SRR3591707mature leaf34.744
SRR3591708Shoot apex95.193
SRR3591709Stem77.046
SRR3591710White floral bud89.721
SRR3591711White flower132.888
SRR3591712Green floral bud101.818
SRR3591713Yellow flower89.877
SRP173429 SRR8316895Juvenile bud stage 60.139
SRR8316896Juvenile bud stage 79.025
SRR8316897Juvenile bud stage 37.092
SRR8316894Third green stage 35.134
SRR8316900Third green stage 100.003
SRR8316901Third green stage 91.172
SRR8316898Complete white stage 39.195
SRR8316899Complete white stage 112.623
SRR8316903Complete white stage 57.804
SRR8316902Silver flowering stage55.965
SRR8316904Silver flowering stage71.369
SRR8316905Silver flowering stage32.127
SRR8316906Gold flowering stage 148.531
SRR8316907Gold flowering stage 130.745
SRR8316908Gold flowering stage 124.946
SRP132670SRR6706286Control50.857
SRR6706287Light intensity 50%54.027
SRR6706288Light intensity 20%62.848
CNP0000432CNS0095592Slightly white alabastrum(diploid) 163.648
CNS0095593Slightly white alabastrum(diploid) 277.019
CNS0095594Slightly white alabastrum(diploid) 362.185
CNS0095595Whole white alabastrum(diploid) 257.374
CNS0095596Whole white alabastrum(diploid) 362.841
CNS0095597Whole white alabastrum(diploid) 456.109
CNS0095598Silvery flower (diploied) 148.453
CNS0095599Silvery flower (diploied) 248.656
CNS0095600Silvery flower (diploied) 380.764
CNS0095601Golden flower (diploid) 138.816
CNS0095602Golden flower (diploid) 271.736
CNS0095603Golden flower (diploid) 367.045
CNS0095604Slightly white alabastrum(tetraploid) 163.814
CNS0095605Slightly white alabastrum(tetraploid) 257.267
CNS0095606Slightly white alabastrum(tetraploid) 398.231
CNS0095607Whole white alabastrum(tetraploid) 133.557
CNS0095608Whole white alabastrum(tetraploid) 231.808
CNS0095609Whole white alabastrum(tetraploid) 378.907
CNS0095610Silvery flower (tetraploid) 190.083
CNS0095611Silvery flower (tetraploid) 268.600
CNS0095612Silvery flower (tetraploid) 354.802
CNS0095613Golden flower (tetraploid) 152.027
CNS0095614Golden flower (tetraploid) 270.323
CNS0095615Golden flower (tetraploid) 379.221
CRA001975CRR073297Stem 150.966
CRR073298Stem 250.800
CRR073299Stem 353.229
CRR073300Leaf 154.630
CRR073301Leaf 249.265
CRR073302Leaf 355.311
CRR073303Juvenile bud 154.781
CRR073304Juvenile bud 248.895
CRR073305Juvenile bud 347.659
CRR073306Third green 122.241
CRR073307Third green 226.908
CRR073308Third green 323.923
CRR073309Second white 146.898
CRR073310Second white 243.572
CRR073311Second white 336.042
CRR073312Silver flowering 125.673
CRR073313Silver flowering 231.338
CRR073314Silver flowering 319.842
CRR073315Gold flowering 134.005
CRR073316Gold flowering 239.830
CRR073317Gold flowering 330.374
CRR073318Tawny withering 139.013
CRR073319Tawny withering 241.451
CRR073320Tawny withering 351.689