Gene detail

Detail information of GWHGAAZE027829

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	ABO21830.1	2.0737E-121	UDP rhamnose:anthocyanidin-3-glucoside rhamnosyltransferase [Petunia axillaris]
Swissprot	tr\|Q43716\|UFOG_PETHY	5E-122	Anthocyanidin 3-O-glucosyltransferase
trEMBL	tr\|A4GRU4\|A4GRU4_9SOLA	8E-122	UDP rhamnose:anthocyanidin-3-glucoside rhamnosyltransferase {ECO:0000313\|EMBL:ABO21830.1} (Fragment)
TAIR10	AT5G54010.1	3E-41	UDP-Glycosyltransferase superfamily protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000008	gene	29186740	29188303	+
GWHAAZE00000008	mRNA	29186740	29188303	+
GWHAAZE00000008	exon	29186740	29187281	+
GWHAAZE00000008	exon	29187576	29187660	+
GWHAAZE00000008	exon	29187773	29188303	+
GWHAAZE00000008	CDS	29186740	29187281	+
GWHAAZE00000008	CDS	29187576	29187660	+
GWHAAZE00000008	CDS	29187773	29188303	+

Transcript Sequence
>GWHTAAZE027863 ATGGCAACAATGTTCGAATCTCCTTCTTCACCACGGCAACGCGTCCATCGCATAAAGTCGATGCTCAACCTCACCCCGCCAAAATCATCCCCATCACATTCCCCACGGTCCCCGGCCTCCTCCAGAATTGAAAGCACCGCAGATGCCACCCCCGCCATCACCGAAGCTCCTCAAGGTCGCCTCGACCTAATGCGACCCGATCAAAACCCTATTATCCGAACTCAATCCCCATTTCATCCTCTTCGACTTCGCCAGAGTTGGCTTCCACAACCGGCGTCCGAATTAGGCATCAAAACCATACTCTTTTCCATCTTCAACGCCATTTCCCTCGCCCGCCATTGTCCTGCAAGGCTAGTTGACGGTAAAACGCCCCCCACTACAATCGAACAAGCTAAGTTGCCTCCCAGGGGGTTCCCCAAAACTTCTTCCGTAACCTCACTCAAGACCTTCGAGGCTCAAGATCTTCTCTACATCTTCAAGAGTTTCCACGGCACTCCCAGTGTCTACGATCGCTTCCCGCTTGGAAAGCTGCTCTGCGACTCGTCATGCAACGACATGGAAAAGCCCTACATAAATTATGTGAAGTCTCAGTTCGATAACAAACCGATCCTTCTCACCGGTCCATCGATAATAGAGCTAGCACTGGGGCTAGAACTCACCGGCCTACCGTTCTTCCTCGTACTACATTTTCCCGCCGGCATCGACAGCACCAACGAGATAAATCGGACATTGCCCGAGGGTTTTTTGGAGAGGGTAAAGGGAAAGGGGGTGGTGCATTCGGGTTGGGTACAGCAACAACACATACTGGCGCACGATAGCGTGGGGTGCCACGTAGGCCATGCGGGGTCCAGCTCCCTGATAGAAGCGTTGGTGAATGGCCGGATGGTAATCTTGCCAATCTTTGGTGACCAAATCACCAACTCAAAGGCTGGTGAGTTTAGATCTCAAGGGGTAGAGGTAAATAAGCGAGATGAGGATGGGCATTTTGGGAAAGAGGATATTTACGAGGCTGTGAAAACAGTGACAGTTAATGTTGAGAGTGAACCGGGGAAGTCAATTAGGGCAAACAAAAAAAATTGGAGGGAGTTTTTGGCAAATAATGAGATACAGAGCGAGTATATTACAAATTTGGTGAAAGAATTAAAGACCATGGTTTGA

Network for GWHGAAZE027829

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00201.19	UDPGT	261	342	1.20E-11

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K22772	FG2	Biosynthesis of secondary metabolites	map01110
K22772	FG2	Flavone and flavonol biosynthesis	map00944

Gene Ontology

GO term	Ontology	Name
GO:0016758	molecular_function	transferase activity, transferring hexosyl groups

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.313
	SRR3591706	second leaf	0.000
	SRR3591707	mature leaf	0.000
	SRR3591708	Shoot apex	0.000
	SRR3591709	Stem	0.052
	SRR3591710	White floral bud	0.296
	SRR3591711	White flower	0.138
	SRR3591712	Green floral bud	3.346
	SRR3591713	Yellow flower	0.036
SRP173429	SRR8316895	Juvenile bud stage	1.137
	SRR8316896	Juvenile bud stage	1.550
	SRR8316897	Juvenile bud stage	0.274
	SRR8316894	Third green stage	1.300
	SRR8316900	Third green stage	4.892
	SRR8316901	Third green stage	5.589
	SRR8316898	Complete white stage	0.009
	SRR8316899	Complete white stage	2.436
	SRR8316903	Complete white stage	0.103
	SRR8316902	Silver flowering stage	1.365
	SRR8316904	Silver flowering stage	1.257
	SRR8316905	Silver flowering stage	0.604
	SRR8316906	Gold flowering stage	0.361
	SRR8316907	Gold flowering stage	0.430
	SRR8316908	Gold flowering stage	0.164
SRP132670	SRR6706286	Control	2.858
	SRR6706287	Light intensity 50%	2.507
	SRR6706288	Light intensity 20%	2.723
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.748
	CNS0095593	Slightly white alabastrum(diploid) 2	0.533
	CNS0095594	Slightly white alabastrum(diploid) 3	0.343
	CNS0095595	Whole white alabastrum(diploid) 2	1.163
	CNS0095596	Whole white alabastrum(diploid) 3	1.208
	CNS0095597	Whole white alabastrum(diploid) 4	0.791
	CNS0095598	Silvery flower (diploied) 1	0.234
	CNS0095599	Silvery flower (diploied) 2	0.185
	CNS0095600	Silvery flower (diploied) 3	0.374
	CNS0095601	Golden flower (diploid) 1	0.285
	CNS0095602	Golden flower (diploid) 2	0.200
	CNS0095603	Golden flower (diploid) 3	0.212
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.062
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.040
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.025
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.024
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.025
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.389
	CNS0095610	Silvery flower (tetraploid) 1	0.097
	CNS0095611	Silvery flower (tetraploid) 2	0.047
	CNS0095612	Silvery flower (tetraploid) 3	0.110
	CNS0095613	Golden flower (tetraploid) 1	0.000
	CNS0095614	Golden flower (tetraploid) 2	0.141
	CNS0095615	Golden flower (tetraploid) 3	0.000
CRA001975	CRR073297	Stem 1	0.482
	CRR073298	Stem 2	0.555
	CRR073299	Stem 3	0.320
	CRR073300	Leaf 1	0.429
	CRR073301	Leaf 2	1.031
	CRR073302	Leaf 3	0.957
	CRR073303	Juvenile bud 1	0.237
	CRR073304	Juvenile bud 2	0.102
	CRR073305	Juvenile bud 3	0.152
	CRR073306	Third green 1	0.012
	CRR073307	Third green 2	0.000
	CRR073308	Third green 3	0.039
	CRR073309	Second white 1	0.021
	CRR073310	Second white 2	0.057
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.002
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	0.000
	CRR073316	Gold flowering 2	0.000
	CRR073317	Gold flowering 3	0.000
	CRR073318	Tawny withering 1	0.000
	CRR073319	Tawny withering 2	0.000
	CRR073320	Tawny withering 3	0.000