Detail information of GWHGAAZE027728


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010264261.12.32048E-61PREDICTED: small heat shock protein, chloroplastic-like [Nelumbo nucifera]
COGYP_007976722.18E-12Small heat shock protein
Swissprottr|P11890|HS23C_OXYRB3E-47Small heat shock protein, chloroplastic (Precursor)
trEMBLtr|M1A0Z7|M1A0Z7_SOLTU3E-56Uncharacterized protein {ECO:0000313|EnsemblPlants:PGSC0003DMT400012249}
TAIR10AT4G25200.11E-22mitochondrion-localized small heat shock protein 23.6

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene2618693526187306-
GWHAAZE00000008mRNA2618693526187306-
GWHAAZE00000008exon2618693526187306-
GWHAAZE00000008CDS2618693526187306-
Transcript Sequence

Network for GWHGAAZE027728

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00011.22HSP20271224.70E-19
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K13993HSP20 Protein processing in endoplasmic reticulum map04141

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf77.127
SRR3591706second leaf20.690
SRR3591707mature leaf91.186
SRR3591708Shoot apex69.306
SRR3591709Stem94.817
SRR3591710White floral bud69.640
SRR3591711White flower75.552
SRR3591712Green floral bud142.967
SRR3591713Yellow flower42.787
SRP173429 SRR8316895Juvenile bud stage 644.029
SRR8316896Juvenile bud stage 1410.356
SRR8316897Juvenile bud stage 587.623
SRR8316894Third green stage 133.901
SRR8316900Third green stage 577.616
SRR8316901Third green stage 648.049
SRR8316898Complete white stage 81.842
SRR8316899Complete white stage 342.116
SRR8316903Complete white stage 134.226
SRR8316902Silver flowering stage256.909
SRR8316904Silver flowering stage225.624
SRR8316905Silver flowering stage212.768
SRR8316906Gold flowering stage 603.810
SRR8316907Gold flowering stage 562.671
SRR8316908Gold flowering stage 315.798
SRP132670SRR6706286Control171.767
SRR6706287Light intensity 50%123.309
SRR6706288Light intensity 20%128.268
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1285.724
CNS0095593Slightly white alabastrum(diploid) 2268.709
CNS0095594Slightly white alabastrum(diploid) 3337.789
CNS0095595Whole white alabastrum(diploid) 2222.577
CNS0095596Whole white alabastrum(diploid) 3180.189
CNS0095597Whole white alabastrum(diploid) 4175.903
CNS0095598Silvery flower (diploied) 1253.239
CNS0095599Silvery flower (diploied) 2820.634
CNS0095600Silvery flower (diploied) 3631.114
CNS0095601Golden flower (diploid) 11159.416
CNS0095602Golden flower (diploid) 2615.664
CNS0095603Golden flower (diploid) 3649.868
CNS0095604Slightly white alabastrum(tetraploid) 1457.107
CNS0095605Slightly white alabastrum(tetraploid) 2455.430
CNS0095606Slightly white alabastrum(tetraploid) 3658.870
CNS0095607Whole white alabastrum(tetraploid) 1293.355
CNS0095608Whole white alabastrum(tetraploid) 2206.040
CNS0095609Whole white alabastrum(tetraploid) 3406.398
CNS0095610Silvery flower (tetraploid) 1376.282
CNS0095611Silvery flower (tetraploid) 2790.270
CNS0095612Silvery flower (tetraploid) 3719.323
CNS0095613Golden flower (tetraploid) 1457.875
CNS0095614Golden flower (tetraploid) 2415.797
CNS0095615Golden flower (tetraploid) 362.389
CRA001975CRR073297Stem 186.879
CRR073298Stem 277.610
CRR073299Stem 377.605
CRR073300Leaf 132.617
CRR073301Leaf 242.074
CRR073302Leaf 348.320
CRR073303Juvenile bud 136.994
CRR073304Juvenile bud 221.712
CRR073305Juvenile bud 335.836
CRR073306Third green 122.856
CRR073307Third green 219.858
CRR073308Third green 314.446
CRR073309Second white 184.372
CRR073310Second white 259.832
CRR073311Second white 336.581
CRR073312Silver flowering 132.932
CRR073313Silver flowering 239.277
CRR073314Silver flowering 324.716
CRR073315Gold flowering 121.498
CRR073316Gold flowering 213.851
CRR073317Gold flowering 317.717
CRR073318Tawny withering 141.854
CRR073319Tawny withering 230.803
CRR073320Tawny withering 346.087