Detail information of GWHGAAZE027692


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009592396.17.12911E-46PREDICTED: auxin-induced protein X10A-like [Nicotiana tomentosiformis]
Swissprottr|P33080|AX10A_SOYBN3E-15Auxin-induced protein X10A
trEMBLtr|K4CNS3|K4CNS3_SOLLC2E-44Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc08g079140.1.1}
TAIR10AT3G60690.13E-28SAUR-like auxin-responsive protein family

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene2567767125678033-
GWHAAZE00000008mRNA2567767125678033-
GWHAAZE00000008exon2567767125678033-
GWHAAZE00000008CDS2567767125678033-
Transcript Sequence

Network for GWHGAAZE027692

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF02519.15Auxin_inducible27986.60E-19
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K14488SAUR Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName
GO:0009733biological_processresponse to auxin

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf7.079
SRR3591706second leaf7.151
SRR3591707mature leaf11.524
SRR3591708Shoot apex5.109
SRR3591709Stem6.014
SRR3591710White floral bud23.682
SRR3591711White flower47.741
SRR3591712Green floral bud19.817
SRR3591713Yellow flower19.937
SRP173429 SRR8316895Juvenile bud stage 13.884
SRR8316896Juvenile bud stage 8.741
SRR8316897Juvenile bud stage 8.794
SRR8316894Third green stage 3.843
SRR8316900Third green stage 11.291
SRR8316901Third green stage 12.275
SRR8316898Complete white stage 3.767
SRR8316899Complete white stage 39.308
SRR8316903Complete white stage 5.091
SRR8316902Silver flowering stage9.600
SRR8316904Silver flowering stage5.905
SRR8316905Silver flowering stage9.163
SRR8316906Gold flowering stage 36.836
SRR8316907Gold flowering stage 21.241
SRR8316908Gold flowering stage 27.965
SRP132670SRR6706286Control12.453
SRR6706287Light intensity 50%9.821
SRR6706288Light intensity 20%8.836
CNP0000432CNS0095592Slightly white alabastrum(diploid) 124.002
CNS0095593Slightly white alabastrum(diploid) 245.862
CNS0095594Slightly white alabastrum(diploid) 331.472
CNS0095595Whole white alabastrum(diploid) 230.825
CNS0095596Whole white alabastrum(diploid) 36.150
CNS0095597Whole white alabastrum(diploid) 413.836
CNS0095598Silvery flower (diploied) 179.533
CNS0095599Silvery flower (diploied) 267.346
CNS0095600Silvery flower (diploied) 326.591
CNS0095601Golden flower (diploid) 171.609
CNS0095602Golden flower (diploid) 246.390
CNS0095603Golden flower (diploid) 351.100
CNS0095604Slightly white alabastrum(tetraploid) 10.716
CNS0095605Slightly white alabastrum(tetraploid) 21.857
CNS0095606Slightly white alabastrum(tetraploid) 30.061
CNS0095607Whole white alabastrum(tetraploid) 11.540
CNS0095608Whole white alabastrum(tetraploid) 21.121
CNS0095609Whole white alabastrum(tetraploid) 310.884
CNS0095610Silvery flower (tetraploid) 18.825
CNS0095611Silvery flower (tetraploid) 23.086
CNS0095612Silvery flower (tetraploid) 314.806
CNS0095613Golden flower (tetraploid) 17.889
CNS0095614Golden flower (tetraploid) 24.935
CNS0095615Golden flower (tetraploid) 33.328
CRA001975CRR073297Stem 115.385
CRR073298Stem 218.300
CRR073299Stem 322.054
CRR073300Leaf 131.529
CRR073301Leaf 246.696
CRR073302Leaf 344.845
CRR073303Juvenile bud 134.762
CRR073304Juvenile bud 245.405
CRR073305Juvenile bud 341.769
CRR073306Third green 112.079
CRR073307Third green 214.375
CRR073308Third green 313.265
CRR073309Second white 17.425
CRR073310Second white 27.978
CRR073311Second white 33.567
CRR073312Silver flowering 16.934
CRR073313Silver flowering 211.407
CRR073314Silver flowering 39.146
CRR073315Gold flowering 129.331
CRR073316Gold flowering 247.417
CRR073317Gold flowering 346.410
CRR073318Tawny withering 18.805
CRR073319Tawny withering 288.813
CRR073320Tawny withering 35.971