Detail information of GWHGAAZE027680


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_009599695.10PREDICTED: SNARE-interacting protein KEULE [Nicotiana tomentosiformis]
Swissprottr|Q9C5X3|KEULE_ARATH0SNARE-interacting protein KEULE
trEMBLtr|K4CNV2|K4CNV2_SOLLC0Uncharacterized protein {ECO:0000313|EnsemblPlants:Solyc08g079520.2.1}
TAIR10AT1G12360.10Sec1/munc18-like (SM) proteins superfamily

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene2546849525483283-
GWHAAZE00000008mRNA2546849525483283-
GWHAAZE00000008exon2548318325483283-
GWHAAZE00000008exon2548297125483067-
GWHAAZE00000008exon2548283125482863-
GWHAAZE00000008exon2547651925476644-
GWHAAZE00000008exon2547625025476441-
GWHAAZE00000008exon2547575625475839-
GWHAAZE00000008exon2547557325475671-
GWHAAZE00000008exon2547498425475060-
GWHAAZE00000008exon2547337425473467-
GWHAAZE00000008exon2547249825472623-
GWHAAZE00000008exon2547126025471376-
GWHAAZE00000008exon2547107525471152-
GWHAAZE00000008exon2546995625470158-
GWHAAZE00000008exon2546936225469452-
GWHAAZE00000008exon2546916725469256-
GWHAAZE00000008exon2546849525468548-
GWHAAZE00000008CDS2548318325483283-
GWHAAZE00000008CDS2548297125483067-
GWHAAZE00000008CDS2548283125482863-
GWHAAZE00000008CDS2547651925476644-
GWHAAZE00000008CDS2547625025476441-
GWHAAZE00000008CDS2547575625475839-
GWHAAZE00000008CDS2547557325475671-
GWHAAZE00000008CDS2547498425475060-
GWHAAZE00000008CDS2547337425473467-
GWHAAZE00000008CDS2547249825472623-
GWHAAZE00000008CDS2547126025471376-
GWHAAZE00000008CDS2547107525471152-
GWHAAZE00000008CDS2546995625470158-
GWHAAZE00000008CDS2546936225469452-
GWHAAZE00000008CDS2546916725469256-
GWHAAZE00000008CDS2546849525468548-
Transcript Sequence

Network for GWHGAAZE027680

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00995.24Sec1125366.50E-84
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K15292STXBP1, MUNC18-1 Synaptic vesicle cycle map04721

Gene Ontology

GO term OntologyName
GO:0006904biological_processvesicle docking involved in exocytosis
GO:0016192biological_processvesicle-mediated transport

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf40.650
SRR3591706second leaf20.413
SRR3591707mature leaf20.202
SRR3591708Shoot apex28.062
SRR3591709Stem44.595
SRR3591710White floral bud33.575
SRR3591711White flower37.066
SRR3591712Green floral bud29.130
SRR3591713Yellow flower38.642
SRP173429 SRR8316895Juvenile bud stage 14.471
SRR8316896Juvenile bud stage 20.111
SRR8316897Juvenile bud stage 9.467
SRR8316894Third green stage 9.083
SRR8316900Third green stage 21.516
SRR8316901Third green stage 20.220
SRR8316898Complete white stage 13.208
SRR8316899Complete white stage 36.487
SRR8316903Complete white stage 23.121
SRR8316902Silver flowering stage11.711
SRR8316904Silver flowering stage19.587
SRR8316905Silver flowering stage9.187
SRR8316906Gold flowering stage 34.644
SRR8316907Gold flowering stage 27.606
SRR8316908Gold flowering stage 35.294
SRP132670SRR6706286Control24.898
SRR6706287Light intensity 50%26.547
SRR6706288Light intensity 20%28.751
CNP0000432CNS0095592Slightly white alabastrum(diploid) 116.226
CNS0095593Slightly white alabastrum(diploid) 218.128
CNS0095594Slightly white alabastrum(diploid) 313.620
CNS0095595Whole white alabastrum(diploid) 215.577
CNS0095596Whole white alabastrum(diploid) 310.409
CNS0095597Whole white alabastrum(diploid) 411.764
CNS0095598Silvery flower (diploied) 119.017
CNS0095599Silvery flower (diploied) 221.217
CNS0095600Silvery flower (diploied) 327.200
CNS0095601Golden flower (diploid) 118.837
CNS0095602Golden flower (diploid) 225.971
CNS0095603Golden flower (diploid) 324.938
CNS0095604Slightly white alabastrum(tetraploid) 115.900
CNS0095605Slightly white alabastrum(tetraploid) 211.084
CNS0095606Slightly white alabastrum(tetraploid) 333.434
CNS0095607Whole white alabastrum(tetraploid) 111.956
CNS0095608Whole white alabastrum(tetraploid) 29.570
CNS0095609Whole white alabastrum(tetraploid) 319.809
CNS0095610Silvery flower (tetraploid) 130.427
CNS0095611Silvery flower (tetraploid) 228.619
CNS0095612Silvery flower (tetraploid) 326.859
CNS0095613Golden flower (tetraploid) 120.099
CNS0095614Golden flower (tetraploid) 225.579
CNS0095615Golden flower (tetraploid) 324.965
CRA001975CRR073297Stem 128.519
CRR073298Stem 223.795
CRR073299Stem 321.800
CRR073300Leaf 130.596
CRR073301Leaf 230.142
CRR073302Leaf 322.751
CRR073303Juvenile bud 125.517
CRR073304Juvenile bud 220.036
CRR073305Juvenile bud 334.123
CRR073306Third green 119.256
CRR073307Third green 214.037
CRR073308Third green 317.124
CRR073309Second white 113.187
CRR073310Second white 219.778
CRR073311Second white 317.905
CRR073312Silver flowering 119.136
CRR073313Silver flowering 215.738
CRR073314Silver flowering 315.919
CRR073315Gold flowering 113.159
CRR073316Gold flowering 215.706
CRR073317Gold flowering 311.203
CRR073318Tawny withering 129.777
CRR073319Tawny withering 233.063
CRR073320Tawny withering 331.492