Gene detail

Detail information of GWHGAAZE027604

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	ACZ34296.1	1.6163E-145	broad substrate reductase/dehydrogenase [Artemisia annua]
COG	YP_008149897.1	2E-45	hypothetical protein SCE1572_17400
Swissprot	tr\|Q9M2E2\|SDR1_ARATH	2E-99	(+)-neomenthol dehydrogenase
trEMBL	tr\|D1MI43\|D1MI43_ARTAN	6E-146	Broad substrate reductase/dehydrogenase {ECO:0000313\|EMBL:ACZ34296.1}
TAIR10	AT3G61220.1	2E-74	NAD(P)-binding Rossmann-fold superfamily protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000008	gene	23448888	23452649	-
GWHAAZE00000008	mRNA	23448888	23452649	-
GWHAAZE00000008	exon	23448888	23449265	-
GWHAAZE00000008	exon	23449794	23449982	-
GWHAAZE00000008	exon	23450347	23450421	-
GWHAAZE00000008	exon	23451583	23451826	-
GWHAAZE00000008	exon	23452612	23452649	-
GWHAAZE00000008	CDS	23452612	23452649	-
GWHAAZE00000008	CDS	23451583	23451826	-
GWHAAZE00000008	CDS	23450347	23450421	-
GWHAAZE00000008	CDS	23449794	23449982	-
GWHAAZE00000008	CDS	23448888	23449265	-

Transcript Sequence
>GWHTAAZE027638 ATGGAAGAGAGCAATACCACTGATTCCTCAAAGACTAGGTGTGCAGTTGTAACCGGAGGGAACAAAGGAATTGGGCTTGAGATTTGTAGGCAGTTAGCATCAAATGAAATAAGAGTAATATTAACTGCTAGAGATGAGAAAAGGGGTATTAAAGCTGTTGAAGAACTTAAAGCTGGTGGACTCTTTGATGTTCTTTTTCATCAACTAGACCTTAAAGATTCTTCAAGCATTGCTTCATTGGCAAAATTTATTGGAACAAACTTCAGTAAACTTGATATTCTGGTGAATAATGCCGCAGAAAATGGAATTATTATAAATGCTGAAGCATTTAGAGCTTTCAAAAATGGAGCTGGATTTGATGAGGTGAATGATGAAAATGCGCACTTGTTGGGTGGAATTATAGAGCAGACATATGAAATGGCGAAAGAATGTCTCGAAACAAATTACTATGGAACTAAAAGAGTGACAGAAGCCCTTCTTCCCCTTCTTCAACTCTCCAATTCACCAAGAATAGTGAATCTTTCCTCCTATTATGGAGAACTATCGCTCATTAACAATGAAAAGGTTAAAGCAGAGCTACAAAATATTGACAACTTGACAGAAGAAAAAATCGATGAAATTTTGCAATGGTTCCTAAAGGATTTCAAGGAAGATAAGTTGAAGGCAAATGGTTGGCCTATTACTGTATCGGCTTATAAAGTTTCAAAAGCTTTTATAAATGCATATACAAGACTCTTAGCGAAGAAATTCCCAAATATGCTTATCAATTGCGTACATCCTGGGTACGTTAGAACGGATATCACTCGCGACACTGGGCCCATGAGCACAGTGGAAGGTGCTAGAGCTCCAGTAAAGTTGGCGTTGTTGCCTGATGATGGTCCTTCTGGTGTCTACTTTAATCAAATGAATGCATCTACTTTTTGA

Network for GWHGAAZE027604

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation
CFinderModule0233	map00902 Monoterpenoid biosynthesis GO:0042744 hydrogen peroxide catabolic process GOslim:biological_process GO:0055114 oxidation-reduction process GOslim:biological_process GO:0006979 response to oxidative stress GOslim:biological_process map01110 Biosynthesis of secondary metabolites

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00106.26	adh_short	14	183	7.50E-24

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K15095	E1.1.1.208	Biosynthesis of secondary metabolites	map01110
K15095	E1.1.1.208	Monoterpenoid biosynthesis	map00902

Gene Ontology

GO term	Ontology	Name

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	104.050
	SRR3591706	second leaf	122.593
	SRR3591707	mature leaf	232.886
	SRR3591708	Shoot apex	45.930
	SRR3591709	Stem	366.878
	SRR3591710	White floral bud	68.842
	SRR3591711	White flower	129.251
	SRR3591712	Green floral bud	19.014
	SRR3591713	Yellow flower	146.715
SRP173429	SRR8316895	Juvenile bud stage	29.757
	SRR8316896	Juvenile bud stage	30.159
	SRR8316897	Juvenile bud stage	24.438
	SRR8316894	Third green stage	10.202
	SRR8316900	Third green stage	24.594
	SRR8316901	Third green stage	25.055
	SRR8316898	Complete white stage	32.103
	SRR8316899	Complete white stage	40.899
	SRR8316903	Complete white stage	35.629
	SRR8316902	Silver flowering stage	17.079
	SRR8316904	Silver flowering stage	29.428
	SRR8316905	Silver flowering stage	11.570
	SRR8316906	Gold flowering stage	26.650
	SRR8316907	Gold flowering stage	16.841
	SRR8316908	Gold flowering stage	53.052
SRP132670	SRR6706286	Control	10.002
	SRR6706287	Light intensity 50%	9.440
	SRR6706288	Light intensity 20%	6.714
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	39.565
	CNS0095593	Slightly white alabastrum(diploid) 2	46.589
	CNS0095594	Slightly white alabastrum(diploid) 3	40.489
	CNS0095595	Whole white alabastrum(diploid) 2	38.576
	CNS0095596	Whole white alabastrum(diploid) 3	18.271
	CNS0095597	Whole white alabastrum(diploid) 4	26.664
	CNS0095598	Silvery flower (diploied) 1	212.221
	CNS0095599	Silvery flower (diploied) 2	137.244
	CNS0095600	Silvery flower (diploied) 3	45.895
	CNS0095601	Golden flower (diploid) 1	159.662
	CNS0095602	Golden flower (diploid) 2	129.193
	CNS0095603	Golden flower (diploid) 3	125.113
	CNS0095604	Slightly white alabastrum(tetraploid) 1	17.171
	CNS0095605	Slightly white alabastrum(tetraploid) 2	18.849
	CNS0095606	Slightly white alabastrum(tetraploid) 3	31.038
	CNS0095607	Whole white alabastrum(tetraploid) 1	16.095
	CNS0095608	Whole white alabastrum(tetraploid) 2	10.602
	CNS0095609	Whole white alabastrum(tetraploid) 3	23.273
	CNS0095610	Silvery flower (tetraploid) 1	37.457
	CNS0095611	Silvery flower (tetraploid) 2	46.446
	CNS0095612	Silvery flower (tetraploid) 3	14.984
	CNS0095613	Golden flower (tetraploid) 1	47.369
	CNS0095614	Golden flower (tetraploid) 2	65.453
	CNS0095615	Golden flower (tetraploid) 3	17.283
CRA001975	CRR073297	Stem 1	14.374
	CRR073298	Stem 2	15.971
	CRR073299	Stem 3	9.974
	CRR073300	Leaf 1	7.496
	CRR073301	Leaf 2	11.429
	CRR073302	Leaf 3	6.148
	CRR073303	Juvenile bud 1	5.763
	CRR073304	Juvenile bud 2	3.298
	CRR073305	Juvenile bud 3	3.565
	CRR073306	Third green 1	7.994
	CRR073307	Third green 2	12.024
	CRR073308	Third green 3	9.190
	CRR073309	Second white 1	4.338
	CRR073310	Second white 2	2.200
	CRR073311	Second white 3	1.703
	CRR073312	Silver flowering 1	2.097
	CRR073313	Silver flowering 2	3.456
	CRR073314	Silver flowering 3	2.659
	CRR073315	Gold flowering 1	100.429
	CRR073316	Gold flowering 2	106.607
	CRR073317	Gold flowering 3	57.184
	CRR073318	Tawny withering 1	86.081
	CRR073319	Tawny withering 2	88.094
	CRR073320	Tawny withering 3	55.542