Gene detail

Detail information of GWHGAAZE027601

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	ACZ34296.1	1.7881E-133	broad substrate reductase/dehydrogenase [Artemisia annua]
COG	YP_007148857.1	5E-42	short-chain alcohol dehydrogenase
Swissprot	tr\|Q9M2E2\|SDR1_ARATH	5E-91	(+)-neomenthol dehydrogenase
trEMBL	tr\|D1MI43\|D1MI43_ARTAN	7E-134	Broad substrate reductase/dehydrogenase {ECO:0000313\|EMBL:ACZ34296.1}
TAIR10	AT3G61220.1	2E-74	NAD(P)-binding Rossmann-fold superfamily protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000008	gene	23381402	23384344	-
GWHAAZE00000008	mRNA	23381402	23384344	-
GWHAAZE00000008	exon	23381402	23381749	-
GWHAAZE00000008	exon	23382307	23382495	-
GWHAAZE00000008	exon	23382859	23382933	-
GWHAAZE00000008	exon	23384102	23384344	-
GWHAAZE00000008	CDS	23384102	23384344	-
GWHAAZE00000008	CDS	23382859	23382933	-
GWHAAZE00000008	CDS	23382307	23382495	-
GWHAAZE00000008	CDS	23381402	23381749	-

Transcript Sequence
>GWHTAAZE027635 TGTGCAGTTGTAACCGGAGGGAACAACGGAATTGGGCTTGAGATTTGTAGGCAGTTAGCATCAAATGGAATAAGAGTAATATTAACTGCTAGAGATGAGAAAAGGGGTATTACAGCTGTTGAAGAACTTAAAGCCGGTGGACTCTTTGATGTTCTTTTTCATCAACTAGACCTTAAAGATTCTTCAACCATTGCTTCATTGGCAAAATTTATTGGAGCAAACTTCAGTAAACTTGATATTCTGGTGAATAATGCCGCAGAAATTGGAATTATTATAAATGTTGAAGCATTTAGAGCTTTCAAAAATGGAGCTGGATTTGATGAGGTGAATGATGAAAATGCGCACTTATTGGGTGGAATTATAGAGCAGACATATGAAATGGCGAAAGAATGTCTCGAAACAAATTACTATGGAACTAAAAGAGTGACAGAAGCCCTTCTTCCCCTTCTTCAACTCTCCAATTCACCAAGAATAGTGAATCTTTCCTCCTATTATGGAGAACTATCGCTACAAAATATTGACAACTTCACAGAAGAAAATATCGATGAAATTTTGCAATGGTTCTTAAGGGATTTCAAGGAAGATAAGTTGAAGGCAAATGGTTGGCCTATTACTGTATCGGCTTATAAAGTTTCAAAAGCTTTGATAAATGCATATACAAGACTCTTAGCGAAGAAATTCCCAAATACGCTTGTCAATTGCGTACATCCTGGGTACGTTAGAATGGATATCACACGCGACTCTGGGCCCATGAGCACAGTGGAAGGTGCTAGAGCTCCAGTAATGTTAGCGTTGTTGCCTGATGATAGTCCTTCTGGTGTCTACTTTAATCAAATGGATGCATCTACTTTTTGA

Network for GWHGAAZE027601

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00106.26	adh_short	2	170	3.90E-24

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K15095	E1.1.1.208	Biosynthesis of secondary metabolites	map01110
K15095	E1.1.1.208	Monoterpenoid biosynthesis	map00902

Gene Ontology

GO term	Ontology	Name

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	4.984
	SRR3591706	second leaf	7.150
	SRR3591707	mature leaf	14.877
	SRR3591708	Shoot apex	4.089
	SRR3591709	Stem	15.926
	SRR3591710	White floral bud	3.012
	SRR3591711	White flower	7.722
	SRR3591712	Green floral bud	1.022
	SRR3591713	Yellow flower	7.863
SRP173429	SRR8316895	Juvenile bud stage	0.698
	SRR8316896	Juvenile bud stage	0.481
	SRR8316897	Juvenile bud stage	0.564
	SRR8316894	Third green stage	0.111
	SRR8316900	Third green stage	0.338
	SRR8316901	Third green stage	0.424
	SRR8316898	Complete white stage	0.464
	SRR8316899	Complete white stage	0.844
	SRR8316903	Complete white stage	0.250
	SRR8316902	Silver flowering stage	0.204
	SRR8316904	Silver flowering stage	0.212
	SRR8316905	Silver flowering stage	0.158
	SRR8316906	Gold flowering stage	0.184
	SRR8316907	Gold flowering stage	0.170
	SRR8316908	Gold flowering stage	0.313
SRP132670	SRR6706286	Control	0.049
	SRR6706287	Light intensity 50%	0.032
	SRR6706288	Light intensity 20%	0.034
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.427
	CNS0095593	Slightly white alabastrum(diploid) 2	0.525
	CNS0095594	Slightly white alabastrum(diploid) 3	0.531
	CNS0095595	Whole white alabastrum(diploid) 2	0.431
	CNS0095596	Whole white alabastrum(diploid) 3	0.214
	CNS0095597	Whole white alabastrum(diploid) 4	0.318
	CNS0095598	Silvery flower (diploied) 1	3.523
	CNS0095599	Silvery flower (diploied) 2	1.920
	CNS0095600	Silvery flower (diploied) 3	0.344
	CNS0095601	Golden flower (diploid) 1	2.859
	CNS0095602	Golden flower (diploid) 2	1.659
	CNS0095603	Golden flower (diploid) 3	1.312
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.235
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.199
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.564
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.149
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.060
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.224
	CNS0095610	Silvery flower (tetraploid) 1	0.195
	CNS0095611	Silvery flower (tetraploid) 2	0.144
	CNS0095612	Silvery flower (tetraploid) 3	0.152
	CNS0095613	Golden flower (tetraploid) 1	0.610
	CNS0095614	Golden flower (tetraploid) 2	0.292
	CNS0095615	Golden flower (tetraploid) 3	0.136
CRA001975	CRR073297	Stem 1	0.136
	CRR073298	Stem 2	0.009
	CRR073299	Stem 3	0.107
	CRR073300	Leaf 1	0.124
	CRR073301	Leaf 2	0.120
	CRR073302	Leaf 3	0.059
	CRR073303	Juvenile bud 1	0.086
	CRR073304	Juvenile bud 2	0.096
	CRR073305	Juvenile bud 3	0.002
	CRR073306	Third green 1	0.024
	CRR073307	Third green 2	0.057
	CRR073308	Third green 3	0.083
	CRR073309	Second white 1	0.082
	CRR073310	Second white 2	0.048
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	0.002
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	0.771
	CRR073316	Gold flowering 2	0.670
	CRR073317	Gold flowering 3	0.592
	CRR073318	Tawny withering 1	0.686
	CRR073319	Tawny withering 2	0.271
	CRR073320	Tawny withering 3	0.077