Gene detail

Detail information of GWHGAAZE027598

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	ACZ34296.1	2.1852E-137	broad substrate reductase/dehydrogenase [Artemisia annua]
COG	YP_003888420.1	5E-47	short-chain dehydrogenase/reductase SDR
Swissprot	tr\|B2X050\|MNR1_CAPAN	5E-89	(+)-neomenthol dehydrogenase
trEMBL	tr\|D1MI43\|D1MI43_ARTAN	8E-138	Broad substrate reductase/dehydrogenase {ECO:0000313\|EMBL:ACZ34296.1}
TAIR10	AT1G01800.1	5E-75	NAD(P)-binding Rossmann-fold superfamily protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000008	gene	23364432	23366826	+
GWHAAZE00000008	mRNA	23364432	23366826	+
GWHAAZE00000008	exon	23364432	23364469	+
GWHAAZE00000008	exon	23365148	23365391	+
GWHAAZE00000008	exon	23365942	23366130	+
GWHAAZE00000008	exon	23366446	23366826	+
GWHAAZE00000008	CDS	23364432	23364469	+
GWHAAZE00000008	CDS	23365148	23365391	+
GWHAAZE00000008	CDS	23365942	23366130	+
GWHAAZE00000008	CDS	23366446	23366826	+

Transcript Sequence
>GWHTAAZE027632 ATGGAAGACAAGAGCATTACCAGTTCAGCACAGAAAAGGGTTGCTGTTGTAACTGGTGGGAACAAAGGAATTGGGCTTGAGATATGTAGGCAGTTGGCATCAAATGGAATAACAGTAACACTAACAGCTAGAGATGAGAAAAGGGGTAATAAAGCTGTTGAAGAACTTAAAGCCTGTGGACTCTCTGATGTTCTTTTTCATCAACTTGATGTTAAAGATCCTTCAAGCATTGCTTCATTGGCAAAATTTATTGAAACCAATTTCAATAAACTTGATATTCTGATGGAGGTGCACGATGAGAATGTGCACTTGTTGGTTGGAATTATAGAGCAGCCTTATGAAATGGGAGAAGAGTGTCTGAAAACAAATTACTACGGAACGAAAAGAGTAACAGAAGCGCTTCTTCCTCTTCTTCAACTCTCAAACTCCGCAAGAATAGTGAATGTTTCCTCCAATTATGGACAACTATTGTGGATTCCCAGTGAGAAGATCAAATCCGAGCTGCAAAATCTTGACAACTTAACTGAAGAGAAAATAGATGAAATTTTGCAATGGTTTCTAAGGGACTTTAAAGAGGACAAGTTGAAGGCAAATGGTTGGCCTCTTACAGTGTCTGCTTATAAAGTTTCCAAAGCTTCAATCAATGCTTACACAAGACTCTTAGCGAAGAAATTCCCTAACATTCTTGTCAATTGCGTCCATCCTGGATATGTCCTAACCGATATCACATGTAACACTGGACACTTGACCCCTGAGGAAGGTGCTAGAGCTCCTGTAATGGTGGCTTTGTTGCCCGATGGTGGTCCCTCTGGCGTCTACTTCAATCAGATGAATTTATTCACTGCTTTTTGA

Network for GWHGAAZE027598

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00106.26	adh_short	14	155	6.30E-26

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K15095	E1.1.1.208	Biosynthesis of secondary metabolites	map01110
K15095	E1.1.1.208	Monoterpenoid biosynthesis	map00902

Gene Ontology

GO term	Ontology	Name

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.000
	SRR3591706	second leaf	0.000
	SRR3591707	mature leaf	0.621
	SRR3591708	Shoot apex	0.000
	SRR3591709	Stem	0.000
	SRR3591710	White floral bud	0.785
	SRR3591711	White flower	0.444
	SRR3591712	Green floral bud	0.384
	SRR3591713	Yellow flower	1.905
SRP173429	SRR8316895	Juvenile bud stage	0.459
	SRR8316896	Juvenile bud stage	0.253
	SRR8316897	Juvenile bud stage	0.075
	SRR8316894	Third green stage	0.540
	SRR8316900	Third green stage	1.476
	SRR8316901	Third green stage	0.906
	SRR8316898	Complete white stage	1.320
	SRR8316899	Complete white stage	3.476
	SRR8316903	Complete white stage	1.101
	SRR8316902	Silver flowering stage	0.285
	SRR8316904	Silver flowering stage	0.225
	SRR8316905	Silver flowering stage	0.131
	SRR8316906	Gold flowering stage	0.212
	SRR8316907	Gold flowering stage	0.162
	SRR8316908	Gold flowering stage	0.331
SRP132670	SRR6706286	Control	0.550
	SRR6706287	Light intensity 50%	0.572
	SRR6706288	Light intensity 20%	0.855
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	1.807
	CNS0095593	Slightly white alabastrum(diploid) 2	1.491
	CNS0095594	Slightly white alabastrum(diploid) 3	0.415
	CNS0095595	Whole white alabastrum(diploid) 2	1.937
	CNS0095596	Whole white alabastrum(diploid) 3	2.890
	CNS0095597	Whole white alabastrum(diploid) 4	2.657
	CNS0095598	Silvery flower (diploied) 1	0.412
	CNS0095599	Silvery flower (diploied) 2	1.168
	CNS0095600	Silvery flower (diploied) 3	1.085
	CNS0095601	Golden flower (diploid) 1	0.587
	CNS0095602	Golden flower (diploid) 2	0.315
	CNS0095603	Golden flower (diploid) 3	0.614
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.499
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.194
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.747
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.316
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.617
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.415
	CNS0095610	Silvery flower (tetraploid) 1	0.117
	CNS0095611	Silvery flower (tetraploid) 2	0.022
	CNS0095612	Silvery flower (tetraploid) 3	0.054
	CNS0095613	Golden flower (tetraploid) 1	0.000
	CNS0095614	Golden flower (tetraploid) 2	0.000
	CNS0095615	Golden flower (tetraploid) 3	0.000
CRA001975	CRR073297	Stem 1	0.135
	CRR073298	Stem 2	0.239
	CRR073299	Stem 3	0.336
	CRR073300	Leaf 1	0.830
	CRR073301	Leaf 2	1.436
	CRR073302	Leaf 3	0.802
	CRR073303	Juvenile bud 1	0.983
	CRR073304	Juvenile bud 2	0.154
	CRR073305	Juvenile bud 3	0.726
	CRR073306	Third green 1	0.113
	CRR073307	Third green 2	0.244
	CRR073308	Third green 3	0.078
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.000
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.000
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	0.000
	CRR073316	Gold flowering 2	0.000
	CRR073317	Gold flowering 3	0.000
	CRR073318	Tawny withering 1	3.357
	CRR073319	Tawny withering 2	7.398
	CRR073320	Tawny withering 3	0.781