Detail information of GWHGAAZE027432


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_004492869.11.2908E-149PREDICTED: phosphoglycolate phosphatase-like [Cicer arietinum]
COGYP_184147.11E-28sugar HAD family phosphatase
Swissprottr|P0DKC4|PGP1B_ARATH1E-137Phosphoglycolate phosphatase 1B, chloroplastic (Precursor)
trEMBLtr|B7FJ10|B7FJ10_MEDTR3E-149Putative uncharacterized protein {ECO:0000313|EMBL:ACJ84739.1}
TAIR10AT5G36700.42E-1092-phosphoglycolate phosphatase 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene1976346519771478-
GWHAAZE00000008mRNA1976346519771478-
GWHAAZE00000008exon1977134919771478-
GWHAAZE00000008exon1976949819769565-
GWHAAZE00000008exon1976922319769315-
GWHAAZE00000008exon1976906919769140-
GWHAAZE00000008exon1976738619767455-
GWHAAZE00000008exon1976690919766988-
GWHAAZE00000008exon1976671419766766-
GWHAAZE00000008exon1976580619765903-
GWHAAZE00000008exon1976476419764863-
GWHAAZE00000008exon1976346519763570-
GWHAAZE00000008CDS1977134919771478-
GWHAAZE00000008CDS1976949819769565-
GWHAAZE00000008CDS1976922319769315-
GWHAAZE00000008CDS1976906919769140-
GWHAAZE00000008CDS1976738619767455-
GWHAAZE00000008CDS1976690919766988-
GWHAAZE00000008CDS1976671419766766-
GWHAAZE00000008CDS1976580619765903-
GWHAAZE00000008CDS1976476419764863-
GWHAAZE00000008CDS1976346519763570-
Transcript Sequence

Network for GWHGAAZE027432

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF13344.7Hydrolase_6381402.30E-34
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K19269PGP, PGLP Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Carbon metabolismmap01200
Glyoxylate and dicarboxylate metabolismmap00630

Gene Ontology

GO term OntologyName
GO:0016791molecular_functionphosphatase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf100.801
SRR3591706second leaf410.643
SRR3591707mature leaf329.031
SRR3591708Shoot apex153.807
SRR3591709Stem46.260
SRR3591710White floral bud22.981
SRR3591711White flower24.225
SRR3591712Green floral bud42.051
SRR3591713Yellow flower21.680
SRP173429 SRR8316895Juvenile bud stage 56.177
SRR8316896Juvenile bud stage 58.696
SRR8316897Juvenile bud stage 42.165
SRR8316894Third green stage 23.450
SRR8316900Third green stage 69.988
SRR8316901Third green stage 67.301
SRR8316898Complete white stage 19.755
SRR8316899Complete white stage 64.553
SRR8316903Complete white stage 26.854
SRR8316902Silver flowering stage17.954
SRR8316904Silver flowering stage25.810
SRR8316905Silver flowering stage12.295
SRR8316906Gold flowering stage 46.369
SRR8316907Gold flowering stage 40.165
SRR8316908Gold flowering stage 35.970
SRP132670SRR6706286Control61.557
SRR6706287Light intensity 50%56.063
SRR6706288Light intensity 20%62.763
CNP0000432CNS0095592Slightly white alabastrum(diploid) 141.315
CNS0095593Slightly white alabastrum(diploid) 234.529
CNS0095594Slightly white alabastrum(diploid) 332.215
CNS0095595Whole white alabastrum(diploid) 231.275
CNS0095596Whole white alabastrum(diploid) 331.789
CNS0095597Whole white alabastrum(diploid) 425.631
CNS0095598Silvery flower (diploied) 146.341
CNS0095599Silvery flower (diploied) 250.326
CNS0095600Silvery flower (diploied) 342.314
CNS0095601Golden flower (diploid) 142.406
CNS0095602Golden flower (diploid) 240.284
CNS0095603Golden flower (diploid) 340.744
CNS0095604Slightly white alabastrum(tetraploid) 150.878
CNS0095605Slightly white alabastrum(tetraploid) 247.929
CNS0095606Slightly white alabastrum(tetraploid) 384.668
CNS0095607Whole white alabastrum(tetraploid) 119.211
CNS0095608Whole white alabastrum(tetraploid) 225.255
CNS0095609Whole white alabastrum(tetraploid) 368.596
CNS0095610Silvery flower (tetraploid) 130.636
CNS0095611Silvery flower (tetraploid) 235.595
CNS0095612Silvery flower (tetraploid) 330.882
CNS0095613Golden flower (tetraploid) 118.135
CNS0095614Golden flower (tetraploid) 226.571
CNS0095615Golden flower (tetraploid) 320.503
CRA001975CRR073297Stem 180.029
CRR073298Stem 274.511
CRR073299Stem 372.160
CRR073300Leaf 145.779
CRR073301Leaf 244.785
CRR073302Leaf 339.546
CRR073303Juvenile bud 142.200
CRR073304Juvenile bud 239.151
CRR073305Juvenile bud 340.765
CRR073306Third green 135.360
CRR073307Third green 223.388
CRR073308Third green 322.602
CRR073309Second white 143.848
CRR073310Second white 232.443
CRR073311Second white 324.718
CRR073312Silver flowering 121.667
CRR073313Silver flowering 220.542
CRR073314Silver flowering 317.294
CRR073315Gold flowering 1334.754
CRR073316Gold flowering 2416.632
CRR073317Gold flowering 3315.337
CRR073318Tawny withering 137.483
CRR073319Tawny withering 234.872
CRR073320Tawny withering 332.895