Detail information of GWHGAAZE027395


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007149293.10hypothetical protein PHAVU_005G058100g [Phaseolus vulgaris]
COGYP_008432247.12E-145elongation factor EF-2
Swissprottr|O23755|EF2_BETVU0Elongation factor 2
trEMBLtr|V7BTG3|V7BTG3_PHAVU0Uncharacterized protein {ECO:0000313|EMBL:ESW21287.1}
TAIR10AT1G56070.10Ribosomal protein S5/Elongation factor G/III/V family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene1887173018874628-
GWHAAZE00000008mRNA1887173018874628-
GWHAAZE00000008exon1887173018872487-
GWHAAZE00000008exon1887257018874171-
GWHAAZE00000008exon1887443718874524-
GWHAAZE00000008exon1887462618874628-
GWHAAZE00000008CDS1887462618874628-
GWHAAZE00000008CDS1887443718874524-
GWHAAZE00000008CDS1887257018874171-
GWHAAZE00000008CDS1887173018872487-
Transcript Sequence

Network for GWHGAAZE027395

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00009.28GTP_EFTU173423.90E-66
PF03144.26GTP_EFTU_D23944679.20E-09
PF14492.7EFG_III4875493.00E-12
PF03764.19EFG_IV5846942.90E-29
PF00679.25EFG_C6977849.00E-21
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03234EEF2 AMPK signaling pathway map04152
Oxytocin signaling pathwaymap04921

Gene Ontology

GO term OntologyName
GO:0005525molecular_functionGTP binding
GO:0003924molecular_functionGTPase activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf17.289
SRR3591706second leaf4.501
SRR3591707mature leaf3.855
SRR3591708Shoot apex8.148
SRR3591709Stem16.686
SRR3591710White floral bud15.950
SRR3591711White flower63.786
SRR3591712Green floral bud38.083
SRR3591713Yellow flower107.953
SRP173429 SRR8316895Juvenile bud stage 30.796
SRR8316896Juvenile bud stage 56.200
SRR8316897Juvenile bud stage 21.413
SRR8316894Third green stage 13.706
SRR8316900Third green stage 39.155
SRR8316901Third green stage 39.885
SRR8316898Complete white stage 5.151
SRR8316899Complete white stage 7.664
SRR8316903Complete white stage 8.957
SRR8316902Silver flowering stage10.496
SRR8316904Silver flowering stage15.699
SRR8316905Silver flowering stage6.631
SRR8316906Gold flowering stage 33.184
SRR8316907Gold flowering stage 31.346
SRR8316908Gold flowering stage 41.762
SRP132670SRR6706286Control26.715
SRR6706287Light intensity 50%22.165
SRR6706288Light intensity 20%20.710
CNP0000432CNS0095592Slightly white alabastrum(diploid) 140.509
CNS0095593Slightly white alabastrum(diploid) 224.914
CNS0095594Slightly white alabastrum(diploid) 343.646
CNS0095595Whole white alabastrum(diploid) 225.583
CNS0095596Whole white alabastrum(diploid) 333.097
CNS0095597Whole white alabastrum(diploid) 421.733
CNS0095598Silvery flower (diploied) 114.257
CNS0095599Silvery flower (diploied) 215.687
CNS0095600Silvery flower (diploied) 378.726
CNS0095601Golden flower (diploid) 121.195
CNS0095602Golden flower (diploid) 295.420
CNS0095603Golden flower (diploid) 394.065
CNS0095604Slightly white alabastrum(tetraploid) 176.525
CNS0095605Slightly white alabastrum(tetraploid) 268.825
CNS0095606Slightly white alabastrum(tetraploid) 387.146
CNS0095607Whole white alabastrum(tetraploid) 162.091
CNS0095608Whole white alabastrum(tetraploid) 260.659
CNS0095609Whole white alabastrum(tetraploid) 3110.487
CNS0095610Silvery flower (tetraploid) 1160.586
CNS0095611Silvery flower (tetraploid) 2153.076
CNS0095612Silvery flower (tetraploid) 3150.149
CNS0095613Golden flower (tetraploid) 198.664
CNS0095614Golden flower (tetraploid) 2162.098
CNS0095615Golden flower (tetraploid) 376.981
CRA001975CRR073297Stem 152.302
CRR073298Stem 243.161
CRR073299Stem 353.828
CRR073300Leaf 140.327
CRR073301Leaf 245.593
CRR073302Leaf 340.578
CRR073303Juvenile bud 147.315
CRR073304Juvenile bud 236.601
CRR073305Juvenile bud 349.217
CRR073306Third green 136.400
CRR073307Third green 229.121
CRR073308Third green 334.562
CRR073309Second white 1130.703
CRR073310Second white 291.045
CRR073311Second white 3114.874
CRR073312Silver flowering 1174.405
CRR073313Silver flowering 2258.622
CRR073314Silver flowering 3181.642
CRR073315Gold flowering 110.571
CRR073316Gold flowering 217.924
CRR073317Gold flowering 311.020
CRR073318Tawny withering 134.258
CRR073319Tawny withering 233.653
CRR073320Tawny withering 336.642