Detail information of GWHGAAZE027210


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_007149664.12.1128E-133hypothetical protein PHAVU_005G088900g [Phaseolus vulgaris]
COGYP_008158631.17E-59NAD(P)H:quinone oxidoreductase
Swissprottr|Q6NQE2|FQRL1_ARATH2E-128Probable NAD(P)H dehydrogenase (quinone) FQR1-like 1 {ECO:0000305}
trEMBLtr|V7BX83|V7BX83_PHAVU8E-134Uncharacterized protein {ECO:0000313|EMBL:ESW21658.1}
TAIR10AT4G27270.13E-93Quinone reductase family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene1628294316284761+
GWHAAZE00000008mRNA1628294316284761+
GWHAAZE00000008exon1628294316283071+
GWHAAZE00000008exon1628343616283698+
GWHAAZE00000008exon1628453016284761+
GWHAAZE00000008CDS1628294316283071+
GWHAAZE00000008CDS1628343616283698+
GWHAAZE00000008CDS1628453016284761+
Transcript Sequence

Network for GWHGAAZE027210

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03358.16FMN_red211482.60E-13
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K03809wrbA Metabolic pathways map01100
Biosynthesis of secondary metabolitesmap01110
Ubiquinone and other terpenoid-quinone biosynthesismap00130

Gene Ontology

GO term OntologyName
GO:0016491molecular_functionoxidoreductase activity
GO:0003955molecular_functionNAD(P)H dehydrogenase (quinone) activity
GO:0010181molecular_functionFMN binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf243.466
SRR3591706second leaf84.400
SRR3591707mature leaf52.650
SRR3591708Shoot apex71.645
SRR3591709Stem329.919
SRR3591710White floral bud190.634
SRR3591711White flower347.076
SRR3591712Green floral bud199.131
SRR3591713Yellow flower484.042
SRP173429 SRR8316895Juvenile bud stage 133.943
SRR8316896Juvenile bud stage 234.861
SRR8316897Juvenile bud stage 81.914
SRR8316894Third green stage 73.443
SRR8316900Third green stage 215.068
SRR8316901Third green stage 279.716
SRR8316898Complete white stage 142.616
SRR8316899Complete white stage 312.807
SRR8316903Complete white stage 161.499
SRR8316902Silver flowering stage147.788
SRR8316904Silver flowering stage176.154
SRR8316905Silver flowering stage90.890
SRR8316906Gold flowering stage 413.585
SRR8316907Gold flowering stage 348.392
SRR8316908Gold flowering stage 476.977
SRP132670SRR6706286Control226.063
SRR6706287Light intensity 50%200.753
SRR6706288Light intensity 20%211.237
CNP0000432CNS0095592Slightly white alabastrum(diploid) 1245.386
CNS0095593Slightly white alabastrum(diploid) 2274.779
CNS0095594Slightly white alabastrum(diploid) 3271.926
CNS0095595Whole white alabastrum(diploid) 2160.360
CNS0095596Whole white alabastrum(diploid) 3150.120
CNS0095597Whole white alabastrum(diploid) 4159.861
CNS0095598Silvery flower (diploied) 1149.954
CNS0095599Silvery flower (diploied) 2181.740
CNS0095600Silvery flower (diploied) 3264.263
CNS0095601Golden flower (diploid) 1217.827
CNS0095602Golden flower (diploid) 2307.999
CNS0095603Golden flower (diploid) 3311.394
CNS0095604Slightly white alabastrum(tetraploid) 1147.935
CNS0095605Slightly white alabastrum(tetraploid) 2130.059
CNS0095606Slightly white alabastrum(tetraploid) 3282.455
CNS0095607Whole white alabastrum(tetraploid) 197.478
CNS0095608Whole white alabastrum(tetraploid) 2101.430
CNS0095609Whole white alabastrum(tetraploid) 3170.364
CNS0095610Silvery flower (tetraploid) 1301.954
CNS0095611Silvery flower (tetraploid) 2209.952
CNS0095612Silvery flower (tetraploid) 3235.881
CNS0095613Golden flower (tetraploid) 1376.174
CNS0095614Golden flower (tetraploid) 2467.509
CNS0095615Golden flower (tetraploid) 3223.271
CRA001975CRR073297Stem 1267.504
CRR073298Stem 2252.608
CRR073299Stem 3314.146
CRR073300Leaf 1260.699
CRR073301Leaf 2311.780
CRR073302Leaf 3375.947
CRR073303Juvenile bud 1300.726
CRR073304Juvenile bud 2313.272
CRR073305Juvenile bud 3272.641
CRR073306Third green 1345.352
CRR073307Third green 2369.795
CRR073308Third green 3324.801
CRR073309Second white 1387.462
CRR073310Second white 2271.989
CRR073311Second white 3195.223
CRR073312Silver flowering 1308.955
CRR073313Silver flowering 2404.053
CRR073314Silver flowering 3323.517
CRR073315Gold flowering 1149.576
CRR073316Gold flowering 2179.040
CRR073317Gold flowering 3131.545
CRR073318Tawny withering 1447.541
CRR073319Tawny withering 2339.758
CRR073320Tawny withering 3556.836