Gene detail

Detail information of GWHGAAZE027173

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_002263264.1	0	PREDICTED: uncharacterized protein LOC100257013 [Vitis vinifera]
COG	YP_001958461.1	5E-30	hypothetical protein Aasi_1443
Swissprot	tr\|Q9FPR3\|EDR1_ARATH	3E-51	Serine/threonine-protein kinase EDR1
trEMBL	tr\|A5B005\|A5B005_VITVI	0	Putative uncharacterized protein {ECO:0000313\|EMBL:CAN65102.1}
TAIR10	AT1G79570.1	0	Protein kinase superfamily protein with octicosapeptide/Phox/Bem1p domain

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000008	gene	15694591	15700760	+
GWHAAZE00000008	mRNA	15694591	15700760	+
GWHAAZE00000008	exon	15694591	15697230	+
GWHAAZE00000008	exon	15697312	15697383	+
GWHAAZE00000008	exon	15697508	15697660	+
GWHAAZE00000008	exon	15697942	15698105	+
GWHAAZE00000008	exon	15698248	15698395	+
GWHAAZE00000008	exon	15698572	15698694	+
GWHAAZE00000008	exon	15700216	15700303	+
GWHAAZE00000008	exon	15700570	15700760	+
GWHAAZE00000008	CDS	15694591	15697230	+
GWHAAZE00000008	CDS	15697312	15697383	+
GWHAAZE00000008	CDS	15697508	15697660	+
GWHAAZE00000008	CDS	15697942	15698105	+
GWHAAZE00000008	CDS	15698248	15698395	+
GWHAAZE00000008	CDS	15698572	15698694	+
GWHAAZE00000008	CDS	15700216	15700303	+
GWHAAZE00000008	CDS	15700570	15700760	+

Transcript Sequence
>GWHTAAZE027207 ATGGAACAATCAAAAAATTACAACCATGTTCCATACAGTTCTGTGGAAGCCGAGAATCAAGAACACGGGCTTGCATCTCAGGGCTTCCCTCTGGACCATACAGCCCACATAAATGCCAATCTGAGACCTGCAGACCTCAAATTTTCAGAAGTTAAGCCTGTGCTTAATTTCTCTATACAGACAGGTGAGGAGTTTTCCCTTGAATTTATGCGGGACCGGGTGAATCCTAGGAAGCCGTTCATCCCACATACTTCTGGTGATCCCAGTCGTACCACAGGTTACTCGGAACTAAAAGGCATTCTAGGCATCAGTCATACTGGGTCTGAAAGTGGGTCCGATGTTTCAATGGTCACTATTGTAGAAAAAAATTCGAAAGAATTTGAGCGGAAGAACTCTTCTTTGTATGAAAACAAAAGTAACTATGGGTCTGTAACATCCGTACCCCGAACTTCATCGGACTACACCAGTAATCGGGCAGTTTTTAATAGTACATCAACAAAGATTAAGGTTCTTTGTAGCTTTGGTGGTAAAATCCTACCTAGGCCAAGTGATGGAAAGCTCAGATACGTGGGAGGTGATACGCGCATTATACGTATAAGCAAGGACATTTCGTGGCAGGATTTGTGGCGGAAAACAATAGAAATCTATAACCAGACCCATGCTATCAAATATCAGCTTCCTGGGGAGGATCTTGATGCCTTGGTTTCTGTGTCTTGTGATGAGGATTTGCAGAATATGATGGAGGAGTGCAATGTAATAGGGGATGAAGAAGGGTCCAAGAAACTTAGGATGTTTTTATTCTCCATGAGCGACTTAGATGACGCTCATTTTGGTCTTGCCGACTCTGGTGGTAATTCTGAGATTCAGTATGTAGTTGCTGTTAATGGCATGGATATGGGATCGAGAAGGGGCTCGATGCTACATGGTCTAGCAAGTTCTTCAGCAAATAATTTAGATGAACTAGATGGGCAAAATGTTGAGAGGGACACAAGAAGTGCTGCTACTGAATTTGTTGGAACAAATACTTCACCTTTGACCACCTTTAATGTCCCATCATCAACAACTCAGTCTTCTCAAGCTCAACCGATTCACCCAAGTTCATCTAATGCTTATGAAACCGAGTCACAGTTTTATCATCGCCAGATGATAAATCAAGGAGAAGCGAAGGAAAACCCCTTGCAGTATGGTTCTGAATCTCGTCCTTCTGTAACTCAACAAGGAAGTTTAACTGAGGCGCATCCATCAAGTGCCTTATCCGTACAGGATCCACCAATACAAGAACGGGAGGTGAAACCGAAAGGTTCTATTCAGAAAGTGGGTGACAATGAAAAGATGCAATCCTCAAGAGATGATTACCTTAATTCTTCACGGCCGTATGATGGTAATATGATGGATTATACTCCTGTTGATGAGGGAAAATCAAAATTCCCTTTAAATCCCCAGGAACATGTAAAGGTCTCTTTGCCACATGATGCTGTTAACCGTGGGGAAGTTCCTAAATCTAGTGACAACGAGTTGCACACAGCTATTAGTGCCCCTGCTAACGAATATGCCAACTCGGAATCTGATCTAATTGATTTGGGCTTCCTCGAGCCACCTGTTCCTCCTCAGAGGGTCTTTCATTCGGAGCGAATTCCGCGGCAACAGGCAGAATTGTTAAACAGGTTCTCGAAATCGGATGATTCTCTTGGGTCTCAGTTTCTTTTAACTCATTCACGTTCGGATACAATGCAGAAGGATTCCATCACAGAATCTGTTGAAAATTTGCATAACGAAGGTCTGGATATCCAGACCGAGCAGCCAATCTCAAATGCAAAGAAATCGTTTACAGATCCACGAAGCACTGATGATGAACTTGAAAAGAATGAAAACATGGAGGCAGTAAAAGACCCTGTGCATGAAGATGTTGTAAATGAAAATCGGGTTCTTAAGGATGACCCGGTTGAGGAAACAAAAGAATCTGGATCACAAGTAAAGCACCACGATGATCCTGCACGTAGTCTTCCAGAGTTTCATTTGGGTGAGAGGGCTGGTAGTAGTAGCGTGTCTGCTAATAACACTCAAGAGCAAACTCAACCTCCTGCTTGGACAGGGAGTTCAACTAGAAATGAACCCTCTGTTAGTGTTTCTAGATCGGAGCGGGGAGATATCCTTATTGACATTAATGACCGATTCCCTAGTGATTTCATTTCAGATATATTTTCGAAAGCGAATTTCGAGGATTTGTCTGGTGTTGGTCCGCTGCAGAGAGATGGAGCCGGTTTGAGCATGAACATAGCAAACCATGAACCTAAACGATGGTCATTTTTCCAGAAATTAGCAGGGGATGAGTTTGGTAAGAAAGACGTTTCTCTTATGGACCAGGATCATGTTGATTTTTCGTCTGAACTTCCAAAAGTTGAAGAAGAAGTTTCCCCAGCTTATAAATTAACACCGTTAACGAAAAATGGAATTTCTTCAAGCCAGATAGATTCCCAAAATAATTTTGGTGAAGTTGATAAGGAAGAGTTAACTGGTACAACTGGAGTTGACTCCATGGCTCTGAATTCGGAGTATAATCCTTCCCAGTTAAATTACAGCGAAGGTCTGCACTTTGATGATTTGGCTGAAAACATAAGAATACCGAACTCGGAGTACGAGGATCAAATCAGAACTATTGGTCTACCTCATCTCGATCCTTCTTTGGGCGATTTGGATATTAATTCTTTGCAGATAATTAAAAATGAAGATCTTGAGGAACTGAGGGAACTGGGTTCTGGTACATTTGGAACGGTATATCATGGGAAATGGAGAGGAACAGATGTTGCCATTAAGCGAATAAAGAAGAGCTGCTTTGCTGGTCGATCATCTGAGCAAGAGAGATTGACCATTGAATTCTGGCGGGAAGCTGATATTCTATCAAAGCTTCACCATCCAAATGTGGTGGCATTTTATGGTGTAGTCCAAGATGGACCAGGCGGAACATTAGCTACTGTGGCCGAGTACATGGTTGATGGTTCTCTGAGGCATGTTTTAGTTCGCAAGGATAGGCAGCTTGATCATCGCAAGAGGCTTATAATTGCAATGGATGCAGCCTTTGGAATGGAGTATCTGCATTCAAAGAACATTGTGCATTTTGATCTGAAATGTGACAATTTGTTAGTGAACTTGAAAGATCCTTCTCGACCCATTTGCAAGGTAGCTGATTTTGGCCTGTCAAAAATCAAGCGGAACACGTTGGTTTCCGGTGGAGTAAGGGGAACCTTGCCTTGGATGGCCCCAGAGCTGCTGAATGGCAGTAGTAATAAAGTTTCTGAAAAGGTTGACGTGTTCTCCTTTGGTATTGTCTTATGGGAGATTCTCACTGGCGAGGAGCCATATGCCAACATGCACTATGGTGCAATCATAGGAGGCATTGTGAATAACACACTGAGGCCAAACATTCCAACCAATTGTGATCCAGAATGGAGAAGGTTAATGGAGCATTGTTGGGCCCCTAATCCAGTGGTCAGGCCAACATTCACTGAAATTACCCGTCGTTTGCGTGTAATGTCTGCAGCTTGCCATACTAAACCACAAGTTCACAAGGCAACTACCTAG

Network for GWHGAAZE027173

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00564.25	PB1	184	267	8.90E-20
PF07714.18	PK_Tyr_Ser-Thr	913	1174	8.10E-63

Protein Sequence

>GWHPAAZE027191
MEQSKNYNHVPYSSVEAENQEHGLASQGFPLDHTAHINANLRPADLKFSEVKPVLNFSIQTGEEFSLEFMRDRVNPRKPFIPHTSGDPSRTTGYSELKGILGISHTGSESGSDVSMVTIVEKNSKEFERKNSSLYENKSNYGSVTSVPRTSSDYTSNRAVFNSTSTKIKVLCSFGGKILPRPSDGKLRYVGGDTRIIRISKDISWQDLWRKTIEIYNQTHAIKYQLPGEDLDALVSVSCDEDLQNMMEECNVIGDEEGSKKLRMFLFSMSDLDDAHFGLADSGGNSEIQYVVAVNGMDMGSRRGSMLHGLASSSANNLDELDGQNVERDTRSAATEFVGTNTSPLTTFNVPSSTTQSSQAQPIHPSSSNAYETESQFYHRQMINQGEAKENPLQYGSESRPSVTQQGSLTEAHPSSALSVQDPPIQEREVKPKGSIQKVGDNEKMQSSRDDYLNSSRPYDGNMMDYTPVDEGKSKFPLNPQEHVKVSLPHDAVNRGEVPKSSDNELHTAISAPANEYANSESDLIDLGFLEPPVPPQRVFHSERIPRQQAELLNRFSKSDDSLGSQFLLTHSRSDTMQKDSITESVENLHNEGLDIQTEQPISNAKKSFTDPRSTDDELEKNENMEAVKDPVHEDVVNENRVLKDDPVEETKESGSQVKHHDDPARSLPEFHLGERAGSSSVSANNTQEQTQPPAWTGSSTRNEPSVSVSRSERGDILIDINDRFPSDFISDIFSKANFEDLSGVGPLQRDGAGLSMNIANHEPKRWSFFQKLAGDEFGKKDVSLMDQDHVDFSSELPKVEEEVSPAYKLTPLTKNGISSSQIDSQNNFGEVDKEELTGTTGVDSMALNSEYNPSQLNYSEGLHFDDLAENIRIPNSEYEDQIRTIGLPHLDPSLGDLDINSLQIIKNEDLEELRELGSGTFGTVYHGKWRGTDVAIKRIKKSCFAGRSSEQERLTIEFWREADILSKLHHPNVVAFYGVVQDGPGGTLATVAEYMVDGSLRHVLVRKDRQLDHRKRLIIAMDAAFGMEYLHSKNIVHFDLKCDNLLVNLKDPSRPICKVADFGLSKIKRNTLVSGGVRGTLPWMAPELLNGSSNKVSEKVDVFSFGIVLWEILTGEEPYANMHYGAIIGGIVNNTLRPNIPTNCDPEWRRLMEHCWAPNPVVRPTFTEITRRLRVMSAACHTKPQVHKATT

Gene family

Gene family	subfamily
Protein Kinases Family	TKL-Pl-6

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0005524	molecular_function	ATP binding
GO:0004672	molecular_function	protein kinase activity
GO:0005515	molecular_function	protein binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	54.218
	SRR3591706	second leaf	23.694
	SRR3591707	mature leaf	29.423
	SRR3591708	Shoot apex	33.285
	SRR3591709	Stem	62.191
	SRR3591710	White floral bud	56.573
	SRR3591711	White flower	64.404
	SRR3591712	Green floral bud	52.245
	SRR3591713	Yellow flower	55.467
SRP173429	SRR8316895	Juvenile bud stage	30.720
	SRR8316896	Juvenile bud stage	44.549
	SRR8316897	Juvenile bud stage	21.331
	SRR8316894	Third green stage	22.708
	SRR8316900	Third green stage	56.985
	SRR8316901	Third green stage	51.511
	SRR8316898	Complete white stage	25.404
	SRR8316899	Complete white stage	83.441
	SRR8316903	Complete white stage	45.904
	SRR8316902	Silver flowering stage	24.588
	SRR8316904	Silver flowering stage	43.762
	SRR8316905	Silver flowering stage	20.812
	SRR8316906	Gold flowering stage	73.556
	SRR8316907	Gold flowering stage	67.391
	SRR8316908	Gold flowering stage	69.367
SRP132670	SRR6706286	Control	45.938
	SRR6706287	Light intensity 50%	51.379
	SRR6706288	Light intensity 20%	56.073
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	24.416
	CNS0095593	Slightly white alabastrum(diploid) 2	24.127
	CNS0095594	Slightly white alabastrum(diploid) 3	22.715
	CNS0095595	Whole white alabastrum(diploid) 2	25.365
	CNS0095596	Whole white alabastrum(diploid) 3	21.822
	CNS0095597	Whole white alabastrum(diploid) 4	23.352
	CNS0095598	Silvery flower (diploied) 1	45.343
	CNS0095599	Silvery flower (diploied) 2	37.633
	CNS0095600	Silvery flower (diploied) 3	84.120
	CNS0095601	Golden flower (diploid) 1	34.944
	CNS0095602	Golden flower (diploid) 2	81.585
	CNS0095603	Golden flower (diploid) 3	79.183
	CNS0095604	Slightly white alabastrum(tetraploid) 1	33.704
	CNS0095605	Slightly white alabastrum(tetraploid) 2	25.268
	CNS0095606	Slightly white alabastrum(tetraploid) 3	75.150
	CNS0095607	Whole white alabastrum(tetraploid) 1	22.424
	CNS0095608	Whole white alabastrum(tetraploid) 2	21.682
	CNS0095609	Whole white alabastrum(tetraploid) 3	55.703
	CNS0095610	Silvery flower (tetraploid) 1	71.901
	CNS0095611	Silvery flower (tetraploid) 2	86.547
	CNS0095612	Silvery flower (tetraploid) 3	65.325
	CNS0095613	Golden flower (tetraploid) 1	30.273
	CNS0095614	Golden flower (tetraploid) 2	62.452
	CNS0095615	Golden flower (tetraploid) 3	64.181
CRA001975	CRR073297	Stem 1	52.543
	CRR073298	Stem 2	47.202
	CRR073299	Stem 3	44.188
	CRR073300	Leaf 1	60.061
	CRR073301	Leaf 2	49.278
	CRR073302	Leaf 3	46.224
	CRR073303	Juvenile bud 1	56.246
	CRR073304	Juvenile bud 2	43.256
	CRR073305	Juvenile bud 3	78.817
	CRR073306	Third green 1	24.139
	CRR073307	Third green 2	16.348
	CRR073308	Third green 3	25.085
	CRR073309	Second white 1	27.350
	CRR073310	Second white 2	36.089
	CRR073311	Second white 3	35.166
	CRR073312	Silver flowering 1	24.754
	CRR073313	Silver flowering 2	22.279
	CRR073314	Silver flowering 3	20.150
	CRR073315	Gold flowering 1	22.195
	CRR073316	Gold flowering 2	38.772
	CRR073317	Gold flowering 3	28.135
	CRR073318	Tawny withering 1	42.814
	CRR073319	Tawny withering 2	37.807
	CRR073320	Tawny withering 3	44.005