Gene detail

Detail information of GWHGAAZE027133

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_007021637.1	2.7636E-98	Basic-leucine zipper transcription factor family protein [Theobroma cacao]
Swissprot	tr\|Q9M2K4\|BZP61_ARATH	2E-76	Basic leucine zipper 61
trEMBL	tr\|A0A061F923\|A0A061F923_THECC	1E-98	Basic-leucine zipper transcription factor family protein {ECO:0000313\|EMBL:EOY13162.1}
TAIR10	AT2G42380.2	4E-60	Basic-leucine zipper (bZIP) transcription factor family protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000008	gene	15260863	15262899	-
GWHAAZE00000008	mRNA	15260863	15262899	-
GWHAAZE00000008	exon	15262241	15262899	-
GWHAAZE00000008	exon	15261578	15261668	-
GWHAAZE00000008	exon	15260863	15261423	-
GWHAAZE00000008	five_prime_UTR	15262747	15262899	-
GWHAAZE00000008	CDS	15262241	15262746	-
GWHAAZE00000008	CDS	15261578	15261668	-
GWHAAZE00000008	CDS	15261289	15261423	-
GWHAAZE00000008	three_prime_UTR	15260863	15261288	-

Transcript Sequence
>GWHTAAZE027167 CTTCAAGCCGTCTCAAATTTTATATATACCTCTCAAACTCTAAATTATTGATTTTGCTCATATTTATTCATACTCGCAATCCTTACAAATACCTACCATATTTCCCCTATTAATTTGAATCATTTCTTTTCTCAAAACAAACTAGTGCATGCAATGGCACAATTACCACCCAAAGCCCCCAATTGGCCTTCTTTCAACCACCACCAAATGATGCCAATCTCCTCCTCCGCCACCACGACCGTAGCGGCACCACCCTCATGGTTCGAGGAATTCCTCGACTTCTCTTCAGCCAGGCGGAACTACCACCGTAGATCGGTGAGCGATCCAATCGCTTTTGTTGAAGAATGCCGTAATTCTAACGGCACGACGTTAATTGGAAATAATGGATTTGAAGGTTTTGATGATGAGCAGCTCAGCTCCATGTTCTCCGACGATGCTCCGGTAACCTTGCCGTCTTGTTCGACCGATCCATCCACACCGTCGGATCAGAACAGCGATAATGAGGAGAAGGTAACACCCCCGGAGCATCACCGACCGCAGCAGCCTAAGAATGAGCCGGGAGAGGTAGAGAGCGAATGCCAACCGGAGACGTTACCAGAAAAGTCCTCCGTAAAGGATTCCAGCGAAACTGTATTGGTCGATCCCAAGAGGGTCAAGAGAATATTAGCGAACCGGCAATCAGCACAAAGATCAAGAGTGAGGAAGCTGCAATACATTTCGGAACTTGAACGTAGCGTTACATCATTACAGACAGAGGTATCGGCATTGTCGCCTAGAGTTGCATTTTTGGATCACCAACGGTTGATTCTCAACGTTGATAATAGCGCTCTTAAGCAACGGATTGCAGCTTTGGCTCAAGATAAGATTTTCAAAGATGGTAAATAATTAACTACATAAGTGCCATATTTTTTTTTTTTTCCTTTTCAATATCGAACTTAAACGTATGTAATGTGTTGTTACTTTTAACCCGTCTACTCTATCAATTAATATTATATATCAAGCTAGCCAAAATAATTGCCTACCAATTAAAAGAATATTGAAACACCATGATTTTTAAATGCATGTCTAGCTTAGTGATATGAACGAATAATTCATTATACGCTAACGAATTTAGTAGCTAGCTAGGTGAAATTAATATACGTATCGCACGCAGAGTGTCATTATCAATTATCATTATAACTGACATTTATTAATTTTTGTTATAAAAAAAAATGTATGAGTGCAGCCCACCAAGAAGCATTGAAAAAGGAGATAGAGAGATTAAGGAAAGTGTATCATGAACAGAACGTTAAGCAGATGGGCAACAACAGT

Network for GWHGAAZE027133

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00170.22	bZIP_1	165	209	9.40E-10

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	bZIP

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006355	biological_process	regulation of transcription, DNA-templated
GO:0003700	molecular_function	DNA-binding transcription factor activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	34.851
	SRR3591706	second leaf	21.956
	SRR3591707	mature leaf	0.127
	SRR3591708	Shoot apex	15.397
	SRR3591709	Stem	0.672
	SRR3591710	White floral bud	39.334
	SRR3591711	White flower	1.966
	SRR3591712	Green floral bud	64.397
	SRR3591713	Yellow flower	0.157
SRP173429	SRR8316895	Juvenile bud stage	22.441
	SRR8316896	Juvenile bud stage	19.064
	SRR8316897	Juvenile bud stage	9.956
	SRR8316894	Third green stage	15.685
	SRR8316900	Third green stage	51.910
	SRR8316901	Third green stage	52.974
	SRR8316898	Complete white stage	19.517
	SRR8316899	Complete white stage	47.992
	SRR8316903	Complete white stage	45.883
	SRR8316902	Silver flowering stage	4.761
	SRR8316904	Silver flowering stage	5.699
	SRR8316905	Silver flowering stage	1.999
	SRR8316906	Gold flowering stage	3.363
	SRR8316907	Gold flowering stage	5.016
	SRR8316908	Gold flowering stage	3.326
SRP132670	SRR6706286	Control	81.017
	SRR6706287	Light intensity 50%	96.915
	SRR6706288	Light intensity 20%	107.295
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	21.516
	CNS0095593	Slightly white alabastrum(diploid) 2	29.895
	CNS0095594	Slightly white alabastrum(diploid) 3	19.901
	CNS0095595	Whole white alabastrum(diploid) 2	27.064
	CNS0095596	Whole white alabastrum(diploid) 3	31.559
	CNS0095597	Whole white alabastrum(diploid) 4	27.956
	CNS0095598	Silvery flower (diploied) 1	1.588
	CNS0095599	Silvery flower (diploied) 2	4.479
	CNS0095600	Silvery flower (diploied) 3	4.640
	CNS0095601	Golden flower (diploid) 1	2.301
	CNS0095602	Golden flower (diploid) 2	1.577
	CNS0095603	Golden flower (diploid) 3	0.696
	CNS0095604	Slightly white alabastrum(tetraploid) 1	49.085
	CNS0095605	Slightly white alabastrum(tetraploid) 2	39.983
	CNS0095606	Slightly white alabastrum(tetraploid) 3	83.763
	CNS0095607	Whole white alabastrum(tetraploid) 1	24.508
	CNS0095608	Whole white alabastrum(tetraploid) 2	29.369
	CNS0095609	Whole white alabastrum(tetraploid) 3	57.774
	CNS0095610	Silvery flower (tetraploid) 1	2.698
	CNS0095611	Silvery flower (tetraploid) 2	2.231
	CNS0095612	Silvery flower (tetraploid) 3	21.358
	CNS0095613	Golden flower (tetraploid) 1	0.496
	CNS0095614	Golden flower (tetraploid) 2	0.511
	CNS0095615	Golden flower (tetraploid) 3	1.336
CRA001975	CRR073297	Stem 1	37.040
	CRR073298	Stem 2	33.821
	CRR073299	Stem 3	22.903
	CRR073300	Leaf 1	49.109
	CRR073301	Leaf 2	52.369
	CRR073302	Leaf 3	37.277
	CRR073303	Juvenile bud 1	39.461
	CRR073304	Juvenile bud 2	48.088
	CRR073305	Juvenile bud 3	59.828
	CRR073306	Third green 1	42.739
	CRR073307	Third green 2	45.006
	CRR073308	Third green 3	40.117
	CRR073309	Second white 1	8.346
	CRR073310	Second white 2	6.537
	CRR073311	Second white 3	5.164
	CRR073312	Silver flowering 1	2.725
	CRR073313	Silver flowering 2	3.613
	CRR073314	Silver flowering 3	0.491
	CRR073315	Gold flowering 1	1.343
	CRR073316	Gold flowering 2	0.795
	CRR073317	Gold flowering 3	1.480
	CRR073318	Tawny withering 1	0.698
	CRR073319	Tawny withering 2	0.881
	CRR073320	Tawny withering 3	0.615