Gene detail

Detail information of GWHGAAZE027039

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_002266691.1	0	PREDICTED: cytochrome P450 724B1 isoform X1 [Vitis vinifera]
COG	YP_001659897.1	2E-55	cytochrome P450
Swissprot	tr\|Q6F4F5\|C724B_ORYSJ	0	Cytochrome P450 724B1
trEMBL	tr\|D7TDB4\|D7TDB4_VITVI	0	Putative uncharacterized protein {ECO:0000313\|EMBL:CBI28487.3}
TAIR10	AT3G50660.1	4E-107	Cytochrome P450 superfamily protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000008	gene	13866429	13871787	-
GWHAAZE00000008	mRNA	13866429	13871787	-
GWHAAZE00000008	exon	13866429	13866537	-
GWHAAZE00000008	exon	13866798	13866919	-
GWHAAZE00000008	exon	13867682	13867788	-
GWHAAZE00000008	exon	13868152	13868230	-
GWHAAZE00000008	exon	13868379	13868465	-
GWHAAZE00000008	exon	13869181	13869429	-
GWHAAZE00000008	exon	13869946	13870098	-
GWHAAZE00000008	exon	13870866	13871190	-
GWHAAZE00000008	exon	13871564	13871787	-
GWHAAZE00000008	CDS	13871564	13871787	-
GWHAAZE00000008	CDS	13870866	13871190	-
GWHAAZE00000008	CDS	13869946	13870098	-
GWHAAZE00000008	CDS	13869181	13869429	-
GWHAAZE00000008	CDS	13868379	13868465	-
GWHAAZE00000008	CDS	13868152	13868230	-
GWHAAZE00000008	CDS	13867682	13867788	-
GWHAAZE00000008	CDS	13866798	13866919	-
GWHAAZE00000008	CDS	13866429	13866537	-

Transcript Sequence
>GWHTAAZE027073 ATGATCTACATGGCTTGGATTCCAATATATGTTGGTTTGGTTTCAACCCTATTATCTGTGTTGGGTCTCATCATCGTCTGTAACCATTTCTTGCCTTTGTTCTTCAAGCTTGGCCCTCTCCCTAAAGGCACTTTTGGTTGGCCTTTACTTGGCGAAACCCTCTCGTTCCTCACCCCTCACCCCTCCAACTCTACTGGCACTTTTCTTCAACACCATTTTTCTAGGTATGGGAAAGTGTTCAAATCGCATTTGTTTTTCAGTCCAACAGTGGTATCAAGTGATGAAGAGCTAAATTACTTTATACTACAAAATGAGGACAAGTTGTTTGAGTGTAGCTATCCAAAGCCCATCCTTGGTGTTCTTGGGAAAAGTTCATTGCTAGTGACAGTTGGTGAGACACACAAGAGGCTAAGGAATGTGGCCCTCTCCCTCGTCACTACCACCAAATCTAAACCTCAATTCCTCAATCACATTGAGACAACAGTTCTTGATGTTTTAGGTTCATGGAAAGGGAAAAAACAAGTCATTTTCTGTGACGAAGCTAGAAAGTTTACATTCAATGTAATAGTGAAGCAGGTCCTAGGTTTAGAACCAGATGACTTAGAGACTAGCAAAATTCTTAAAGATTTCCTCACTTTCATGAGAGGCCTCATTTCATTTCCACTCTATATTCCTGGAACTCCATATGCAAGAGCTGTCCAGGCTAGAGGCAGAATATGTTCAACTGTTAAAGCAATTATAGAGAAAAGGAGAAGAAATGACAACAAAAAGAGTAATAATAGTAGTGATTTCTTAGAGATACTACTAAGTGCTGATACTTGCTTGTCTGAAGATGAAAAAGTGAGTTTTGTTCTCGATTCTCTACTCGGTGGATATGAAACTACCTCTCTCCTCATGTCCATGGTCGTTCACTTTCTAGCCCAATCAACCACTGCCCTTGAACAATTAAAGCTAGAGCATCAGAAAATAAGAAGCATGAAGCAGAAAGATGTGTATTTGAACATGGAAGATTACGAGAAAATGGAATTCACCCAAAATGTGATCAATGAAGCTCTAAGATATGGCAATATTGTTAAATTTGTGCACCGAAAGGCTCTAAGGGATGTCATATTTAAAGAATATTTAATACCATCTGGTTGGAAGGTCCTACCAGTTTTCAGTGCAGTTCACTTAGACCCTTCTCTCCATGCAAATTCTCACCACTTTCATCCTTGGAGATGGGAGAGGCAAGATCAGACATACAAAAAGTTTACTCCATTTGGAGGCGGATCAAGATGCTGTCCAGGATCTGAACTTGCTAAGTTAGAGGTTGCTTTTTTCCTACACCACCTTGTACTAAATTTCAGATGGAGAATAGAAGATGGTGATCAACCCATTGCATATCCATATGTAGAATTCGAAAGAGGGTTAGCACTACAAGTGGACCACTGTCCCATCGGACCCCTCTTCGTTTGA

Network for GWHGAAZE027039

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.23	p450	41	458	8.60E-59

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K12639	CYP724B1, D11	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Brassinosteroid biosynthesis	map00905

Gene Ontology

GO term	Ontology	Name
GO:0055114	biological_process	oxidation-reduction process
GO:0016705	molecular_function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0005506	molecular_function	iron ion binding
GO:0020037	molecular_function	heme binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.000
	SRR3591706	second leaf	0.000
	SRR3591707	mature leaf	0.000
	SRR3591708	Shoot apex	1.593
	SRR3591709	Stem	0.112
	SRR3591710	White floral bud	0.052
	SRR3591711	White flower	0.052
	SRR3591712	Green floral bud	0.075
	SRR3591713	Yellow flower	0.000
SRP173429	SRR8316895	Juvenile bud stage	0.000
	SRR8316896	Juvenile bud stage	0.041
	SRR8316897	Juvenile bud stage	0.000
	SRR8316894	Third green stage	0.000
	SRR8316900	Third green stage	0.062
	SRR8316901	Third green stage	0.000
	SRR8316898	Complete white stage	0.000
	SRR8316899	Complete white stage	0.000
	SRR8316903	Complete white stage	0.057
	SRR8316902	Silver flowering stage	0.000
	SRR8316904	Silver flowering stage	0.000
	SRR8316905	Silver flowering stage	0.000
	SRR8316906	Gold flowering stage	0.000
	SRR8316907	Gold flowering stage	0.000
	SRR8316908	Gold flowering stage	0.000
SRP132670	SRR6706286	Control	0.000
	SRR6706287	Light intensity 50%	0.009
	SRR6706288	Light intensity 20%	0.000
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	0.000
	CNS0095593	Slightly white alabastrum(diploid) 2	0.002
	CNS0095594	Slightly white alabastrum(diploid) 3	0.000
	CNS0095595	Whole white alabastrum(diploid) 2	0.055
	CNS0095596	Whole white alabastrum(diploid) 3	0.000
	CNS0095597	Whole white alabastrum(diploid) 4	0.026
	CNS0095598	Silvery flower (diploied) 1	0.000
	CNS0095599	Silvery flower (diploied) 2	0.000
	CNS0095600	Silvery flower (diploied) 3	0.000
	CNS0095601	Golden flower (diploid) 1	0.000
	CNS0095602	Golden flower (diploid) 2	0.127
	CNS0095603	Golden flower (diploid) 3	0.085
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.000
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.000
	CNS0095606	Slightly white alabastrum(tetraploid) 3	0.000
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.000
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.000
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.000
	CNS0095610	Silvery flower (tetraploid) 1	0.000
	CNS0095611	Silvery flower (tetraploid) 2	0.000
	CNS0095612	Silvery flower (tetraploid) 3	0.104
	CNS0095613	Golden flower (tetraploid) 1	0.090
	CNS0095614	Golden flower (tetraploid) 2	0.000
	CNS0095615	Golden flower (tetraploid) 3	0.000
CRA001975	CRR073297	Stem 1	0.000
	CRR073298	Stem 2	0.000
	CRR073299	Stem 3	0.000
	CRR073300	Leaf 1	0.000
	CRR073301	Leaf 2	0.000
	CRR073302	Leaf 3	0.000
	CRR073303	Juvenile bud 1	0.000
	CRR073304	Juvenile bud 2	0.000
	CRR073305	Juvenile bud 3	0.000
	CRR073306	Third green 1	0.000
	CRR073307	Third green 2	0.000
	CRR073308	Third green 3	0.000
	CRR073309	Second white 1	0.000
	CRR073310	Second white 2	0.179
	CRR073311	Second white 3	0.000
	CRR073312	Silver flowering 1	0.033
	CRR073313	Silver flowering 2	0.000
	CRR073314	Silver flowering 3	0.000
	CRR073315	Gold flowering 1	0.000
	CRR073316	Gold flowering 2	0.000
	CRR073317	Gold flowering 3	0.000
	CRR073318	Tawny withering 1	0.000
	CRR073319	Tawny withering 2	0.115
	CRR073320	Tawny withering 3	0.000