Detail information of GWHGAAZE026965


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010252513.10PREDICTED: serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform-like [Nelumbo nucifera]
Swissprottr|Q8RW96|2A5G_ARATH0Serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform
trEMBLtr|B9SH46|B9SH46_RICCO0Protein phosphatase 2a, regulatory subunit, putative {ECO:0000313|EMBL:EEF37048.1}
TAIR10AT4G15415.20Protein phosphatase 2A regulatory B subunit family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene1288664312890865-
GWHAAZE00000008mRNA1288664312890865-
GWHAAZE00000008exon1288960912890865-
GWHAAZE00000008exon1288664312886987-
GWHAAZE00000008CDS1288960912890865-
GWHAAZE00000008CDS1288664312886987-
Transcript Sequence

Network for GWHGAAZE026965

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF01603.21B561045156.90E-188
Protein Sequence

Gene family

Gene familysubfamily
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KEGG pathway

KO Enzyme pathway mapID
K11584PPP2R5 mRNA surveillance pathway map03015
Sphingolipid signaling pathwaymap04071
PI3K-Akt signaling pathwaymap04151
AMPK signaling pathwaymap04152
Meiosis - yeastmap04113
Oocyte meiosismap04114
Adrenergic signaling in cardiomyocytesmap04261
Dopaminergic synapsemap04728

Gene Ontology

GO term OntologyName
GO:0007165biological_processsignal transduction
GO:0000159cellular_componentprotein phosphatase type 2A complex
GO:0019888molecular_functionprotein phosphatase regulator activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf12.487
SRR3591706second leaf8.916
SRR3591707mature leaf9.891
SRR3591708Shoot apex14.851
SRR3591709Stem14.125
SRR3591710White floral bud12.373
SRR3591711White flower15.727
SRR3591712Green floral bud15.410
SRR3591713Yellow flower11.180
SRP173429 SRR8316895Juvenile bud stage 6.693
SRR8316896Juvenile bud stage 9.365
SRR8316897Juvenile bud stage 4.833
SRR8316894Third green stage 4.950
SRR8316900Third green stage 10.929
SRR8316901Third green stage 10.143
SRR8316898Complete white stage 5.378
SRR8316899Complete white stage 16.255
SRR8316903Complete white stage 7.927
SRR8316902Silver flowering stage4.339
SRR8316904Silver flowering stage7.523
SRR8316905Silver flowering stage2.544
SRR8316906Gold flowering stage 11.644
SRR8316907Gold flowering stage 8.561
SRR8316908Gold flowering stage 12.421
SRP132670SRR6706286Control8.457
SRR6706287Light intensity 50%9.725
SRR6706288Light intensity 20%9.956
CNP0000432CNS0095592Slightly white alabastrum(diploid) 16.960
CNS0095593Slightly white alabastrum(diploid) 28.629
CNS0095594Slightly white alabastrum(diploid) 36.876
CNS0095595Whole white alabastrum(diploid) 26.454
CNS0095596Whole white alabastrum(diploid) 34.304
CNS0095597Whole white alabastrum(diploid) 46.246
CNS0095598Silvery flower (diploied) 17.433
CNS0095599Silvery flower (diploied) 25.735
CNS0095600Silvery flower (diploied) 39.002
CNS0095601Golden flower (diploid) 17.554
CNS0095602Golden flower (diploid) 210.513
CNS0095603Golden flower (diploid) 310.497
CNS0095604Slightly white alabastrum(tetraploid) 17.469
CNS0095605Slightly white alabastrum(tetraploid) 27.515
CNS0095606Slightly white alabastrum(tetraploid) 313.969
CNS0095607Whole white alabastrum(tetraploid) 14.650
CNS0095608Whole white alabastrum(tetraploid) 24.022
CNS0095609Whole white alabastrum(tetraploid) 38.596
CNS0095610Silvery flower (tetraploid) 19.012
CNS0095611Silvery flower (tetraploid) 212.410
CNS0095612Silvery flower (tetraploid) 310.503
CNS0095613Golden flower (tetraploid) 15.430
CNS0095614Golden flower (tetraploid) 26.754
CNS0095615Golden flower (tetraploid) 310.922
CRA001975CRR073297Stem 116.888
CRR073298Stem 216.367
CRR073299Stem 315.477
CRR073300Leaf 112.522
CRR073301Leaf 214.073
CRR073302Leaf 312.875
CRR073303Juvenile bud 113.877
CRR073304Juvenile bud 211.553
CRR073305Juvenile bud 315.326
CRR073306Third green 17.494
CRR073307Third green 26.792
CRR073308Third green 37.107
CRR073309Second white 110.197
CRR073310Second white 27.924
CRR073311Second white 39.212
CRR073312Silver flowering 17.624
CRR073313Silver flowering 27.804
CRR073314Silver flowering 35.750
CRR073315Gold flowering 112.932
CRR073316Gold flowering 218.567
CRR073317Gold flowering 316.441
CRR073318Tawny withering 119.431
CRR073319Tawny withering 220.237
CRR073320Tawny withering 320.117