Detail information of GWHGAAZE026913


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_002272924.19.29938E-49PREDICTED: putative zinc finger protein At1g68190 [Vitis vinifera]
Swissprottr|O23379|COL11_ARATH7E-13Putative zinc finger protein CONSTANS-LIKE 11
trEMBLtr|F6GXR0|F6GXR0_VITVI3E-49Putative uncharacterized protein {ECO:0000313|EMBL:CCB44746.1}
TAIR10AT4G27310.11E-23B-box type zinc finger family protein

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene1197224411973355-
GWHAAZE00000008mRNA1197224411973355-
GWHAAZE00000008exon1197224411972555-
GWHAAZE00000008exon1197281911973355-
GWHAAZE00000008CDS1197281911973355-
GWHAAZE00000008CDS1197224411972555-
Transcript Sequence

Network for GWHGAAZE026913

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00643.25zf-B_box3436.50E-07
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyOthers

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName
GO:0008270molecular_functionzinc ion binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf86.051
SRR3591706second leaf95.009
SRR3591707mature leaf153.103
SRR3591708Shoot apex86.318
SRR3591709Stem117.309
SRR3591710White floral bud64.074
SRR3591711White flower107.884
SRR3591712Green floral bud24.447
SRR3591713Yellow flower56.429
SRP173429 SRR8316895Juvenile bud stage 45.570
SRR8316896Juvenile bud stage 22.644
SRR8316897Juvenile bud stage 22.646
SRR8316894Third green stage 12.896
SRR8316900Third green stage 16.641
SRR8316901Third green stage 19.156
SRR8316898Complete white stage 13.457
SRR8316899Complete white stage 67.343
SRR8316903Complete white stage 22.958
SRR8316902Silver flowering stage27.161
SRR8316904Silver flowering stage37.160
SRR8316905Silver flowering stage16.701
SRR8316906Gold flowering stage 61.604
SRR8316907Gold flowering stage 42.790
SRR8316908Gold flowering stage 62.752
SRP132670SRR6706286Control49.783
SRR6706287Light intensity 50%51.437
SRR6706288Light intensity 20%49.246
CNP0000432CNS0095592Slightly white alabastrum(diploid) 141.428
CNS0095593Slightly white alabastrum(diploid) 241.750
CNS0095594Slightly white alabastrum(diploid) 337.448
CNS0095595Whole white alabastrum(diploid) 227.496
CNS0095596Whole white alabastrum(diploid) 311.336
CNS0095597Whole white alabastrum(diploid) 426.574
CNS0095598Silvery flower (diploied) 180.058
CNS0095599Silvery flower (diploied) 274.927
CNS0095600Silvery flower (diploied) 340.809
CNS0095601Golden flower (diploid) 198.667
CNS0095602Golden flower (diploid) 275.682
CNS0095603Golden flower (diploid) 370.857
CNS0095604Slightly white alabastrum(tetraploid) 127.326
CNS0095605Slightly white alabastrum(tetraploid) 224.611
CNS0095606Slightly white alabastrum(tetraploid) 344.950
CNS0095607Whole white alabastrum(tetraploid) 127.921
CNS0095608Whole white alabastrum(tetraploid) 211.076
CNS0095609Whole white alabastrum(tetraploid) 314.356
CNS0095610Silvery flower (tetraploid) 146.926
CNS0095611Silvery flower (tetraploid) 234.259
CNS0095612Silvery flower (tetraploid) 36.354
CNS0095613Golden flower (tetraploid) 127.432
CNS0095614Golden flower (tetraploid) 248.043
CNS0095615Golden flower (tetraploid) 376.685
CRA001975CRR073297Stem 17.529
CRR073298Stem 25.415
CRR073299Stem 37.049
CRR073300Leaf 18.858
CRR073301Leaf 211.091
CRR073302Leaf 39.695
CRR073303Juvenile bud 114.251
CRR073304Juvenile bud 215.052
CRR073305Juvenile bud 311.172
CRR073306Third green 1451.892
CRR073307Third green 2326.760
CRR073308Third green 3345.521
CRR073309Second white 1392.301
CRR073310Second white 2363.050
CRR073311Second white 3313.246
CRR073312Silver flowering 1201.241
CRR073313Silver flowering 2147.858
CRR073314Silver flowering 3133.738
CRR073315Gold flowering 13.714
CRR073316Gold flowering 23.368
CRR073317Gold flowering 34.209
CRR073318Tawny withering 12.614
CRR073319Tawny withering 213.625
CRR073320Tawny withering 36.738