Gene detail

Detail information of GWHGAAZE026849

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_010035773.1	0	PREDICTED: ADP,ATP carrier protein 3, mitochondrial [Eucalyptus grandis]
Swissprot	tr\|O49447\|ADT3_ARATH	0	ADP,ATP carrier protein 3, mitochondrial (Precursor)
trEMBL	tr\|A0A059A0M2\|A0A059A0M2_EUCGR	0	Uncharacterized protein {ECO:0000313\|EMBL:KCW47236.1}
TAIR10	AT5G13490.2	5E-141	ADP/ATP carrier 2

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000008	gene	10957465	10960466	+
GWHAAZE00000008	mRNA	10957465	10960466	+
GWHAAZE00000008	exon	10957465	10957818	+
GWHAAZE00000008	exon	10958838	10959209	+
GWHAAZE00000008	exon	10960167	10960466	+
GWHAAZE00000008	CDS	10957465	10957818	+
GWHAAZE00000008	CDS	10958838	10959209	+
GWHAAZE00000008	CDS	10960167	10960466	+

Transcript Sequence
>GWHTAAZE026883 TTATCCAATGTTAATGGTGCATATGTAAATGGAGCTTTCCAAAGTCCTTATTTGGAACTTGTATCGCCTCCATCTCTTGTTTACATACAAGCTCCTTCGGAAAAAGGTCTAGGTGGTTTCATGGTGGATTTCCTCATGGGAGGAGTTTCTGGCGCCATCTCTAAAACGGCAGCTGCTCCACTTGAGCGAGTTAAGCTTTTGATTCAAAATCAGGACGAGATGCTCAAAACTGGTCGACTATCTGAGCCATACAAGGGAATTACTGATTGCCTTGTCAGGAGTGTAAAAGATGAGGGCATTCTCTCTCTTTGGAGAAGCAACTATACTAATGTGATCAGATACTTCCCCACCCAGGCCCTGAACTTTGCTTTCAAAGATTACTTCAAGGCGCTCTTTAATTTCAAGAAAGACAGGGATGGCTACTGGAAATGGTTTGCCGGAAACTTAGCATCAGGGAGTGCTGCTGGGGCCGCATCCTCTCTGTTTGTTTATTCCCTGGATTATGCCCGAACACGTTTAGCTAATGATGGCAAGTCTGCTACAAAGGGCGGTGAAAGGCAGTTTAATGGTTTAATTGATGTTTACAAGAAAACCCTCAAAACTGATGGCATTGCCGGTCTTTATCGTGGATTTAATATCTCATGTTTGGGAATTATAGTCTACCGTGGGCTCTATTTTGGGATGTATGATTCTCTGAAACCTGTCGTTCTGCTTGGAAACTTGCAGGATAGTTTCCTGGCAAGTTTCTTTCTGGGATGGGGTATCACCATTGGAGCTGGCCTTGCTTCTTACCCAATTGATACGGTGAGAAGAAGGATGATGATGACATCTGGCGAAGCCGTAAAGTATAAGAGCTCTTTGGATGCGTTCTCCCAGATTGTGAAGAAAGAAGGGGCTAAATCGCTCTTCAAGGGTGCCGGAGCAAACATCCTCCGTGCTGTTGCTGGTGCAGGCGTGCTTGCCGGTTACGACAAATTGCAGCTCGTTCTTTTGGGCAAGAAATACGGATCTGGTGGTGGTAGTTAA

Network for GWHGAAZE026849

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00153.28	Mito_carr	40	134	2.60E-21
PF00153.28	Mito_carr	142	236	1.50E-24
PF00153.28	Mito_carr	244	331	4.20E-16

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K05863	SLC25A4S, ANT	Calcium signaling pathway	map04020
		cGMP-PKG signaling pathway	map04022
		Necroptosis	map04217
		Cellular senescence	map04218

Gene Ontology

GO term	Ontology	Name
GO:0055085	biological_process	transmembrane transport
GO:0005743	cellular_component	mitochondrial inner membrane
GO:0022857	molecular_function	transmembrane transporter activity

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.307
	SRR3591706	second leaf	1.157
	SRR3591707	mature leaf	19.216
	SRR3591708	Shoot apex	0.913
	SRR3591709	Stem	3.635
	SRR3591710	White floral bud	4.686
	SRR3591711	White flower	11.603
	SRR3591712	Green floral bud	4.154
	SRR3591713	Yellow flower	45.764
SRP173429	SRR8316895	Juvenile bud stage	7.503
	SRR8316896	Juvenile bud stage	11.213
	SRR8316897	Juvenile bud stage	4.105
	SRR8316894	Third green stage	2.842
	SRR8316900	Third green stage	10.053
	SRR8316901	Third green stage	9.880
	SRR8316898	Complete white stage	8.136
	SRR8316899	Complete white stage	26.967
	SRR8316903	Complete white stage	10.638
	SRR8316902	Silver flowering stage	15.180
	SRR8316904	Silver flowering stage	16.877
	SRR8316905	Silver flowering stage	11.271
	SRR8316906	Gold flowering stage	130.137
	SRR8316907	Gold flowering stage	48.846
	SRR8316908	Gold flowering stage	100.184
SRP132670	SRR6706286	Control	18.063
	SRR6706287	Light intensity 50%	14.945
	SRR6706288	Light intensity 20%	14.273
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	9.582
	CNS0095593	Slightly white alabastrum(diploid) 2	8.641
	CNS0095594	Slightly white alabastrum(diploid) 3	9.942
	CNS0095595	Whole white alabastrum(diploid) 2	6.606
	CNS0095596	Whole white alabastrum(diploid) 3	2.861
	CNS0095597	Whole white alabastrum(diploid) 4	4.560
	CNS0095598	Silvery flower (diploied) 1	9.305
	CNS0095599	Silvery flower (diploied) 2	14.544
	CNS0095600	Silvery flower (diploied) 3	15.146
	CNS0095601	Golden flower (diploid) 1	16.308
	CNS0095602	Golden flower (diploid) 2	28.466
	CNS0095603	Golden flower (diploid) 3	23.906
	CNS0095604	Slightly white alabastrum(tetraploid) 1	4.351
	CNS0095605	Slightly white alabastrum(tetraploid) 2	4.087
	CNS0095606	Slightly white alabastrum(tetraploid) 3	6.599
	CNS0095607	Whole white alabastrum(tetraploid) 1	2.995
	CNS0095608	Whole white alabastrum(tetraploid) 2	1.363
	CNS0095609	Whole white alabastrum(tetraploid) 3	2.583
	CNS0095610	Silvery flower (tetraploid) 1	6.966
	CNS0095611	Silvery flower (tetraploid) 2	5.108
	CNS0095612	Silvery flower (tetraploid) 3	6.144
	CNS0095613	Golden flower (tetraploid) 1	13.296
	CNS0095614	Golden flower (tetraploid) 2	20.999
	CNS0095615	Golden flower (tetraploid) 3	2.001
CRA001975	CRR073297	Stem 1	7.039
	CRR073298	Stem 2	7.595
	CRR073299	Stem 3	6.302
	CRR073300	Leaf 1	5.132
	CRR073301	Leaf 2	8.976
	CRR073302	Leaf 3	11.306
	CRR073303	Juvenile bud 1	9.183
	CRR073304	Juvenile bud 2	5.144
	CRR073305	Juvenile bud 3	10.300
	CRR073306	Third green 1	2.950
	CRR073307	Third green 2	3.415
	CRR073308	Third green 3	4.741
	CRR073309	Second white 1	7.124
	CRR073310	Second white 2	11.572
	CRR073311	Second white 3	17.987
	CRR073312	Silver flowering 1	93.768
	CRR073313	Silver flowering 2	84.274
	CRR073314	Silver flowering 3	72.357
	CRR073315	Gold flowering 1	26.002
	CRR073316	Gold flowering 2	31.021
	CRR073317	Gold flowering 3	42.746
	CRR073318	Tawny withering 1	40.421
	CRR073319	Tawny withering 2	55.398
	CRR073320	Tawny withering 3	16.895