Gene detail

Detail information of GWHGAAZE026791

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	KDP37750.1	8.90785E-92	hypothetical protein JCGZ_05240 [Jatropha curcas]
Swissprot	tr\|Q9FPR3\|EDR1_ARATH	6E-14	Serine/threonine-protein kinase EDR1
trEMBL	tr\|A0A067KZU8\|A0A067KZU8_JATCU	3E-92	Uncharacterized protein {ECO:0000313\|EMBL:KDP37750.1}
TAIR10	AT3G58640.2	5E-66	Mitogen activated protein kinase kinase kinase-related

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000008	gene	10135249	10138616	+
GWHAAZE00000008	mRNA	10135249	10138616	+
GWHAAZE00000008	exon	10135249	10135316	+
GWHAAZE00000008	exon	10136338	10136452	+
GWHAAZE00000008	exon	10137498	10137783	+
GWHAAZE00000008	exon	10137991	10138114	+
GWHAAZE00000008	exon	10138541	10138616	+
GWHAAZE00000008	CDS	10135249	10135316	+
GWHAAZE00000008	CDS	10136338	10136452	+
GWHAAZE00000008	CDS	10137498	10137783	+
GWHAAZE00000008	CDS	10137991	10138114	+
GWHAAZE00000008	CDS	10138541	10138616	+

Transcript Sequence
>GWHTAAZE026825 ATGTGGATTTCGGCTATGTGGAGCAGCAAAAATTTTGCATATCGTAGTATAGGAACTGCTAATGGAAGGGCTGTACGAGCAATGAATGAAACACTGAAGCAGAACCGCCTCTTAAGAGAACAAGAGGATAATATGCCATATCCTTCAGATGACAAAAACATTGGTGCAGATCATCAAAAAAATGTGTCTGATTTTCATCATGTTGATCGTGATGAAATATCCGGTGGAAGGTCCTCTTTATATGCTCTTCCCCGGGAGCACATGAGTTCTCAAAAAGCAATTTCATTGCCTTCATCTCCACATGAATTTAGGAGCCAGACTGCAGAGAGAAGTGGGGTAAATGATGAAATGGTCTCAACCTGGAACAAAGTGCTGGAATCACCCACTTTTCAAAGTCGGCCTCTATTACCGTTCCAAGAATGGAATATTGATTACTCAGAAATAACTGTTGGCACTCGCGTTGGAATCGGATTTTTCGGAGAAGTTTTTCGAGGCATTTGGAATGGAACAGATGTTGCGATCAAGGTATTTCTGGAGCAGGATCTGACTGCTGAAAACATGGAGGATTTCTGCAATGAAATATCCATTCTTAGCCGCCTTCGACATCCAAATGGTATTCATCCTCACTTCTATTCGTATTATTCGTCTTACTCTGATTTTTATATTTAG

Network for GWHGAAZE026791

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF07714.18	PK_Tyr_Ser-Thr	149	204	1.00E-07

Protein Sequence

Gene family

Gene family	subfamily
Protein Kinases Family	TKL_CTR1-DRK-1

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006468	biological_process	protein phosphorylation
GO:0004672	molecular_function	protein kinase activity
GO:0005524	molecular_function	ATP binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	57.694
	SRR3591706	second leaf	31.508
	SRR3591707	mature leaf	25.394
	SRR3591708	Shoot apex	39.592
	SRR3591709	Stem	48.516
	SRR3591710	White floral bud	20.418
	SRR3591711	White flower	29.034
	SRR3591712	Green floral bud	24.311
	SRR3591713	Yellow flower	24.401
SRP173429	SRR8316895	Juvenile bud stage	19.151
	SRR8316896	Juvenile bud stage	24.242
	SRR8316897	Juvenile bud stage	12.376
	SRR8316894	Third green stage	14.852
	SRR8316900	Third green stage	38.888
	SRR8316901	Third green stage	40.861
	SRR8316898	Complete white stage	12.273
	SRR8316899	Complete white stage	40.878
	SRR8316903	Complete white stage	19.171
	SRR8316902	Silver flowering stage	9.989
	SRR8316904	Silver flowering stage	19.595
	SRR8316905	Silver flowering stage	5.769
	SRR8316906	Gold flowering stage	20.265
	SRR8316907	Gold flowering stage	15.185
	SRR8316908	Gold flowering stage	23.622
SRP132670	SRR6706286	Control	20.032
	SRR6706287	Light intensity 50%	21.901
	SRR6706288	Light intensity 20%	24.855
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	21.338
	CNS0095593	Slightly white alabastrum(diploid) 2	24.008
	CNS0095594	Slightly white alabastrum(diploid) 3	16.394
	CNS0095595	Whole white alabastrum(diploid) 2	18.003
	CNS0095596	Whole white alabastrum(diploid) 3	14.898
	CNS0095597	Whole white alabastrum(diploid) 4	19.970
	CNS0095598	Silvery flower (diploied) 1	28.367
	CNS0095599	Silvery flower (diploied) 2	15.772
	CNS0095600	Silvery flower (diploied) 3	22.097
	CNS0095601	Golden flower (diploid) 1	16.056
	CNS0095602	Golden flower (diploid) 2	20.104
	CNS0095603	Golden flower (diploid) 3	22.358
	CNS0095604	Slightly white alabastrum(tetraploid) 1	28.274
	CNS0095605	Slightly white alabastrum(tetraploid) 2	22.784
	CNS0095606	Slightly white alabastrum(tetraploid) 3	52.093
	CNS0095607	Whole white alabastrum(tetraploid) 1	14.939
	CNS0095608	Whole white alabastrum(tetraploid) 2	13.281
	CNS0095609	Whole white alabastrum(tetraploid) 3	35.423
	CNS0095610	Silvery flower (tetraploid) 1	36.534
	CNS0095611	Silvery flower (tetraploid) 2	31.450
	CNS0095612	Silvery flower (tetraploid) 3	25.491
	CNS0095613	Golden flower (tetraploid) 1	15.060
	CNS0095614	Golden flower (tetraploid) 2	23.984
	CNS0095615	Golden flower (tetraploid) 3	14.929
CRA001975	CRR073297	Stem 1	22.957
	CRR073298	Stem 2	17.330
	CRR073299	Stem 3	19.254
	CRR073300	Leaf 1	30.118
	CRR073301	Leaf 2	22.612
	CRR073302	Leaf 3	23.879
	CRR073303	Juvenile bud 1	31.090
	CRR073304	Juvenile bud 2	19.329
	CRR073305	Juvenile bud 3	30.672
	CRR073306	Third green 1	8.234
	CRR073307	Third green 2	10.156
	CRR073308	Third green 3	6.762
	CRR073309	Second white 1	6.469
	CRR073310	Second white 2	7.569
	CRR073311	Second white 3	9.126
	CRR073312	Silver flowering 1	2.717
	CRR073313	Silver flowering 2	2.815
	CRR073314	Silver flowering 3	2.435
	CRR073315	Gold flowering 1	11.089
	CRR073316	Gold flowering 2	18.705
	CRR073317	Gold flowering 3	7.337
	CRR073318	Tawny withering 1	25.558
	CRR073319	Tawny withering 2	22.633
	CRR073320	Tawny withering 3	24.708