Detail information of GWHGAAZE026777


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrKDO63406.10hypothetical protein CISIN_1g014750mg [Citrus sinensis]
COGYP_008149401.15E-23hypothetical protein SCE1572_14835
Swissprottr|Q39010|KSG6_ARATH0Shaggy-related protein kinase zeta
trEMBLtr|A0A067FJM8|A0A067FJM8_CITSI0Uncharacterized protein {ECO:0000313|EMBL:KDO63406.1}
TAIR10AT2G30980.10SHAGGY-related protein kinase dZeta

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene999812210003003-
GWHAAZE00000008mRNA999812210003003-
GWHAAZE00000008exon1000290510003003-
GWHAAZE00000008exon1000227710002416-
GWHAAZE00000008exon1000203810002113-
GWHAAZE00000008exon1000177810001870-
GWHAAZE00000008exon1000147010001529-
GWHAAZE00000008exon1000110010001372-
GWHAAZE00000008exon1000095110001025-
GWHAAZE00000008exon1000082110000877-
GWHAAZE00000008exon1000011010000130-
GWHAAZE00000008exon999989310000033-
GWHAAZE00000008exon99997159999765-
GWHAAZE00000008exon99995289999623-
GWHAAZE00000008exon99993529999435-
GWHAAZE00000008exon99988389998939-
GWHAAZE00000008exon99981229998379-
GWHAAZE00000008CDS1000290510003003-
GWHAAZE00000008CDS1000227710002416-
GWHAAZE00000008CDS1000203810002113-
GWHAAZE00000008CDS1000177810001870-
GWHAAZE00000008CDS1000147010001529-
GWHAAZE00000008CDS1000110010001372-
GWHAAZE00000008CDS1000095110001025-
GWHAAZE00000008CDS1000082110000877-
GWHAAZE00000008CDS1000011010000130-
GWHAAZE00000008CDS999989310000033-
GWHAAZE00000008CDS99997159999765-
GWHAAZE00000008CDS99995289999623-
GWHAAZE00000008CDS99993529999435-
GWHAAZE00000008CDS99988389998939-
GWHAAZE00000008CDS99981229998379-
Transcript Sequence

Network for GWHGAAZE026777

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation
CFinderModule0036Protein Kinases CMGC_GSK family Protein Kinases CMGC_GSK
map04075 Plant hormone signal transduction


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00069.26Pkinase1404313.60E-61
Protein Sequence

Gene family

Gene familysubfamily
Protein Kinases FamilyCMGC_GSK

KEGG pathway

KO Enzyme pathway mapID
K14502BIN2 Plant hormone signal transduction map04075

Gene Ontology

GO term OntologyName
GO:0006468biological_processprotein phosphorylation
GO:0004672molecular_functionprotein kinase activity
GO:0005524molecular_functionATP binding

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf113.636
SRR3591706second leaf46.024
SRR3591707mature leaf46.095
SRR3591708Shoot apex86.626
SRR3591709Stem101.655
SRR3591710White floral bud77.995
SRR3591711White flower87.949
SRR3591712Green floral bud58.557
SRR3591713Yellow flower79.337
SRP173429 SRR8316895Juvenile bud stage 40.644
SRR8316896Juvenile bud stage 57.935
SRR8316897Juvenile bud stage 27.361
SRR8316894Third green stage 21.784
SRR8316900Third green stage 62.650
SRR8316901Third green stage 64.225
SRR8316898Complete white stage 43.171
SRR8316899Complete white stage 121.664
SRR8316903Complete white stage 68.055
SRR8316902Silver flowering stage41.384
SRR8316904Silver flowering stage52.897
SRR8316905Silver flowering stage28.713
SRR8316906Gold flowering stage 108.590
SRR8316907Gold flowering stage 80.652
SRR8316908Gold flowering stage 102.841
SRP132670SRR6706286Control65.482
SRR6706287Light intensity 50%65.146
SRR6706288Light intensity 20%69.353
CNP0000432CNS0095592Slightly white alabastrum(diploid) 140.773
CNS0095593Slightly white alabastrum(diploid) 243.156
CNS0095594Slightly white alabastrum(diploid) 334.132
CNS0095595Whole white alabastrum(diploid) 235.216
CNS0095596Whole white alabastrum(diploid) 326.078
CNS0095597Whole white alabastrum(diploid) 431.035
CNS0095598Silvery flower (diploied) 170.518
CNS0095599Silvery flower (diploied) 255.019
CNS0095600Silvery flower (diploied) 393.092
CNS0095601Golden flower (diploid) 170.990
CNS0095602Golden flower (diploid) 2106.446
CNS0095603Golden flower (diploid) 3100.075
CNS0095604Slightly white alabastrum(tetraploid) 149.285
CNS0095605Slightly white alabastrum(tetraploid) 239.778
CNS0095606Slightly white alabastrum(tetraploid) 392.848
CNS0095607Whole white alabastrum(tetraploid) 133.102
CNS0095608Whole white alabastrum(tetraploid) 223.020
CNS0095609Whole white alabastrum(tetraploid) 358.664
CNS0095610Silvery flower (tetraploid) 178.477
CNS0095611Silvery flower (tetraploid) 287.840
CNS0095612Silvery flower (tetraploid) 379.087
CNS0095613Golden flower (tetraploid) 157.467
CNS0095614Golden flower (tetraploid) 280.537
CNS0095615Golden flower (tetraploid) 379.513
CRA001975CRR073297Stem 1100.153
CRR073298Stem 291.702
CRR073299Stem 392.684
CRR073300Leaf 1100.066
CRR073301Leaf 293.746
CRR073302Leaf 393.653
CRR073303Juvenile bud 1105.050
CRR073304Juvenile bud 285.242
CRR073305Juvenile bud 3119.029
CRR073306Third green 178.371
CRR073307Third green 263.011
CRR073308Third green 369.597
CRR073309Second white 145.983
CRR073310Second white 254.450
CRR073311Second white 340.226
CRR073312Silver flowering 140.520
CRR073313Silver flowering 232.862
CRR073314Silver flowering 337.355
CRR073315Gold flowering 157.445
CRR073316Gold flowering 285.777
CRR073317Gold flowering 358.871
CRR073318Tawny withering 1132.336
CRR073319Tawny withering 2100.402
CRR073320Tawny withering 3138.207