Gene detail

Detail information of GWHGAAZE026772

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_002277383.1	1.50714E-83	PREDICTED: probable WRKY transcription factor 65 [Vitis vinifera]
Swissprot	tr\|Q93WV5\|WRK69_ARATH	1E-57	Probable WRKY transcription factor 69
trEMBL	tr\|A0A068V5W4\|A0A068V5W4_COFCA	1E-75	Coffea canephora DH200=94 genomic scaffold, scaffold_112 {ECO:0000313\|EMBL:CDP15957.1}
TAIR10	AT3G58710.2	4E-48	WRKY DNA-binding protein 69

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000008	gene	9956688	9964140	-
GWHAAZE00000008	mRNA	9956688	9964140	-
GWHAAZE00000008	exon	9964016	9964140	-
GWHAAZE00000008	exon	9963730	9963876	-
GWHAAZE00000008	exon	9956688	9957162	-
GWHAAZE00000008	CDS	9964016	9964140	-
GWHAAZE00000008	CDS	9963730	9963876	-
GWHAAZE00000008	CDS	9956688	9957162	-

Transcript Sequence
>GWHTAAZE026806 ATGATGGACGATAGATTCGACAGCTACCCAATTGTTAATGAACAATATGATGATGCCACAACTACGCCGGAAAACGTAGCTAACTCTCCCGTCTCCGGCGACGACACAACGGTGACCAGAAAGAGGAGGGGTTTAGGGAAGAGAGTGATGACGGTGAAAATGGGCGGCGGCGTGGATGGGACACGGATCAAAGGAGAGGTATATCCACCGACGGATTCATGGGCATGGAGAAAGTACGGTCAGAAACCCATCAAAGGATCTCCTTACCCCAGGGGATACTATCGGTGTAGCAGTTCAAAAGGCTGCCCGGCCAAAAAGCAAGTAGAGAGAAGCCACGTGGACCCCACTACCGTCGTCATCACCTACTCCTGCGACCACAACCATCCCATCCTTTCCTCCACGGCCGCCAAGAACTTCACCGCTACCGTTCCGGCCAAATTCCCGCCGGAGGAGCTCGCAGTCTTCGCCAGCCAACCGGACGTCGAATCCAACGACGAGTTTGCCGAATTCACCGGCGAGTGCGGCTGGTTGCCCGACGCATCGTTTACCATGCTCGAGACCCCCGTGATTGTGGGGACCGCGTTTGTGGAAGCTGACGTCGCGTTGGGGTCCACGATGGGGGAGGAGGATGAGTCTTTGTTTGCGGATCTAGGAGAGCTGCCGGAGTGTTCGTTGGTTTTTGGCCGGAGCGACGACCATCGACGATTGTGTGGTGGAGGGGCTGTGAGTTGCTGCAGTACAGGATAG

Network for GWHGAAZE026772

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF03106.16	WRKY	72	129	3.40E-24

Protein Sequence

Gene family

Gene family	subfamily
Transcription Factors Family	WRKY

KEGG pathway

KO	Enzyme	pathway	mapID
--	--	--	--

Gene Ontology

GO term	Ontology	Name
GO:0006355	biological_process	regulation of transcription, DNA-templated
GO:0003700	molecular_function	DNA-binding transcription factor activity
GO:0043565	molecular_function	sequence-specific DNA binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	0.132
	SRR3591706	second leaf	0.708
	SRR3591707	mature leaf	0.268
	SRR3591708	Shoot apex	1.058
	SRR3591709	Stem	1.427
	SRR3591710	White floral bud	0.264
	SRR3591711	White flower	0.337
	SRR3591712	Green floral bud	0.155
	SRR3591713	Yellow flower	0.000
SRP173429	SRR8316895	Juvenile bud stage	0.415
	SRR8316896	Juvenile bud stage	0.370
	SRR8316897	Juvenile bud stage	0.333
	SRR8316894	Third green stage	0.180
	SRR8316900	Third green stage	0.416
	SRR8316901	Third green stage	0.457
	SRR8316898	Complete white stage	0.000
	SRR8316899	Complete white stage	0.433
	SRR8316903	Complete white stage	0.410
	SRR8316902	Silver flowering stage	0.048
	SRR8316904	Silver flowering stage	0.318
	SRR8316905	Silver flowering stage	0.046
	SRR8316906	Gold flowering stage	0.956
	SRR8316907	Gold flowering stage	0.579
	SRR8316908	Gold flowering stage	0.953
SRP132670	SRR6706286	Control	0.800
	SRR6706287	Light intensity 50%	0.655
	SRR6706288	Light intensity 20%	0.666
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	1.039
	CNS0095593	Slightly white alabastrum(diploid) 2	1.282
	CNS0095594	Slightly white alabastrum(diploid) 3	0.505
	CNS0095595	Whole white alabastrum(diploid) 2	0.776
	CNS0095596	Whole white alabastrum(diploid) 3	0.783
	CNS0095597	Whole white alabastrum(diploid) 4	0.599
	CNS0095598	Silvery flower (diploied) 1	1.675
	CNS0095599	Silvery flower (diploied) 2	0.691
	CNS0095600	Silvery flower (diploied) 3	0.349
	CNS0095601	Golden flower (diploid) 1	2.122
	CNS0095602	Golden flower (diploid) 2	0.849
	CNS0095603	Golden flower (diploid) 3	0.540
	CNS0095604	Slightly white alabastrum(tetraploid) 1	1.545
	CNS0095605	Slightly white alabastrum(tetraploid) 2	1.810
	CNS0095606	Slightly white alabastrum(tetraploid) 3	1.110
	CNS0095607	Whole white alabastrum(tetraploid) 1	1.783
	CNS0095608	Whole white alabastrum(tetraploid) 2	1.396
	CNS0095609	Whole white alabastrum(tetraploid) 3	0.618
	CNS0095610	Silvery flower (tetraploid) 1	1.410
	CNS0095611	Silvery flower (tetraploid) 2	1.014
	CNS0095612	Silvery flower (tetraploid) 3	1.276
	CNS0095613	Golden flower (tetraploid) 1	2.870
	CNS0095614	Golden flower (tetraploid) 2	2.876
	CNS0095615	Golden flower (tetraploid) 3	1.572
CRA001975	CRR073297	Stem 1	1.221
	CRR073298	Stem 2	1.200
	CRR073299	Stem 3	3.222
	CRR073300	Leaf 1	0.833
	CRR073301	Leaf 2	0.285
	CRR073302	Leaf 3	0.895
	CRR073303	Juvenile bud 1	0.257
	CRR073304	Juvenile bud 2	0.473
	CRR073305	Juvenile bud 3	0.527
	CRR073306	Third green 1	0.735
	CRR073307	Third green 2	0.400
	CRR073308	Third green 3	0.481
	CRR073309	Second white 1	0.064
	CRR073310	Second white 2	0.347
	CRR073311	Second white 3	0.252
	CRR073312	Silver flowering 1	1.519
	CRR073313	Silver flowering 2	0.447
	CRR073314	Silver flowering 3	2.499
	CRR073315	Gold flowering 1	9.773
	CRR073316	Gold flowering 2	8.738
	CRR073317	Gold flowering 3	7.283
	CRR073318	Tawny withering 1	3.626
	CRR073319	Tawny withering 2	2.947
	CRR073320	Tawny withering 3	1.525