Gene detail

Detail information of GWHGAAZE026696

Functional Annotation

Database	Orthologs	E value	Annotation
Nr	XP_009788131.1	1.121E-121	PREDICTED: cytochrome P450 750A1-like [Nicotiana sylvestris]
COG	YP_001022570.1	7E-10	cytochrome
Swissprot	tr\|Q9SD85\|F3PH_ARATH	6E-65	Flavonoid 3'-monooxygenase
trEMBL	tr\|M1A124\|M1A124_SOLTU	9E-124	Uncharacterized protein {ECO:0000313\|EnsemblPlants:PGSC0003DMT400012313}
TAIR10	AT5G07990.1	6E-45	Cytochrome P450 superfamily protein

Location And Transcript Sequence (JBrowse)

Scaffold	Type	Start	End	Strand
GWHAAZE00000008	gene	8809782	8811816	+
GWHAAZE00000008	mRNA	8809782	8811816	+
GWHAAZE00000008	exon	8809782	8810684	+
GWHAAZE00000008	exon	8811649	8811816	+
GWHAAZE00000008	CDS	8809782	8810684	+
GWHAAZE00000008	CDS	8811649	8811816	+

Transcript Sequence
>GWHTAAZE026730 ATGGAATCCTTACCATGGTTTATTATTCTCTTCCTAACCTTATTTTTAGCCACCACCCTACCCCTCCTCTTAAAGCTGCTGCTCCACCCCCGCCGCCCCAACAAACTCCCACCAGGTCCTAAACCATGGCCGGTCATCGGCAACCTCCACCAAGTCGGTCCCAATCCCCACCGCTCCTTCCACTCCCTTTCCAAGACCTACGGCCCCCTCCTCCTCCTCCGGTTCGGGTCCCGCCCCGTGGTGGTGGCCTCCTCCCCACACATGGCCGAACAATTCCTCAAGACCCACGACCTCGTATTTGCCTCCCGCCCCACCACCGCAGCAGGAAAGTACACTAGCTACAACTACTCCGACATGACATGGGCACCCTACGGACCCCACTGGCGCCAGGCACGCAAAATATACCTCACCGAGATACTCAGCCCTAAGAAACTAGAGACTTATGAGCACATCCTGGAGGAAGAAAAGAAATCATTCATTCGACGTTTATACACCATAGGTGGGGATGAGTCTATTAAACTCAGAGAAGAGTTGACTCGGTACACGCTATCGAGTATTAGTAGAATGGTGTTAGGGAATAAGGATTTTGGCACCAGTGTGAGGATAGAGGAGTTGCAAGAGATGTTGGATGAGTGGTTCTTCCTAAATGGGGTGTTTAATATAGGGGATTGGATACCTTGGCTAGGATTTTTTGACTTGCAAGGGTATGTGAAGAGAATGAAGGGTTTGTCTAGGAAGTTTGAGAAGTTCCATAATTATGTGATAAGTGGTCATAAGGGTAATCATAATAAAAGGAGGGAATTAGGTGAGAAGGAAGATATGGTGGATGTGTTGTTGAAGCTTGCAAATGATCCTAATCTTGAGGTTAAGCTCACTAATGATTGTGTTAAGGGATTGATACAGGTTGTGAGGTCTACTTTGGCCAATTTGTTGCATGGGTTTGTTTGGAAGTTGCCTAATGATATGAAGGCTGAGGATATTTGCATGGAGGAATTTTATGGTCTTACTACACACCCAAGGGTCTCGCTTGGTTTGATTTTGGAGCCTAGACTCCCACTTCATCTTTATTAA

Network for GWHGAAZE026696

Network category	Network	Top300 PCC genelist
Coexpression Positive	Network	Top300 PCC genelist
Coexpression Negative	Network	Top300 PCC genelist

Functional Module

Module ID	Function Annotation

Protein Structure

Pfam accession	Pfam name	Alignment start	Alignment end	E-value
PF00067.23	p450	37	296	5.30E-32

Protein Sequence

Gene family

Gene family	subfamily
--	--

KEGG pathway

KO	Enzyme	pathway	mapID
K20623	CYP92A6	Metabolic pathways	map01100
		Biosynthesis of secondary metabolites	map01110
		Brassinosteroid biosynthesis	map00905

Gene Ontology

GO term	Ontology	Name
GO:0055114	biological_process	oxidation-reduction process
GO:0005506	molecular_function	iron ion binding
GO:0016705	molecular_function	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037	molecular_function	heme binding

Expression pattern

Expression pattern detail

SRP	Sample	Description	TPM
SRP075780	SRR3591705	youngest leaf	9.269
	SRR3591706	second leaf	6.655
	SRR3591707	mature leaf	33.243
	SRR3591708	Shoot apex	4.257
	SRR3591709	Stem	1.818
	SRR3591710	White floral bud	2.315
	SRR3591711	White flower	5.275
	SRR3591712	Green floral bud	0.909
	SRR3591713	Yellow flower	12.718
SRP173429	SRR8316895	Juvenile bud stage	0.706
	SRR8316896	Juvenile bud stage	0.996
	SRR8316897	Juvenile bud stage	1.272
	SRR8316894	Third green stage	0.585
	SRR8316900	Third green stage	6.512
	SRR8316901	Third green stage	3.967
	SRR8316898	Complete white stage	0.676
	SRR8316899	Complete white stage	1.193
	SRR8316903	Complete white stage	0.678
	SRR8316902	Silver flowering stage	0.033
	SRR8316904	Silver flowering stage	0.418
	SRR8316905	Silver flowering stage	0.153
	SRR8316906	Gold flowering stage	2.155
	SRR8316907	Gold flowering stage	1.026
	SRR8316908	Gold flowering stage	4.467
SRP132670	SRR6706286	Control	3.479
	SRR6706287	Light intensity 50%	3.329
	SRR6706288	Light intensity 20%	2.946
CNP0000432	CNS0095592	Slightly white alabastrum(diploid) 1	7.794
	CNS0095593	Slightly white alabastrum(diploid) 2	1.037
	CNS0095594	Slightly white alabastrum(diploid) 3	2.882
	CNS0095595	Whole white alabastrum(diploid) 2	1.990
	CNS0095596	Whole white alabastrum(diploid) 3	2.341
	CNS0095597	Whole white alabastrum(diploid) 4	0.688
	CNS0095598	Silvery flower (diploied) 1	3.514
	CNS0095599	Silvery flower (diploied) 2	3.363
	CNS0095600	Silvery flower (diploied) 3	1.294
	CNS0095601	Golden flower (diploid) 1	9.576
	CNS0095602	Golden flower (diploid) 2	18.995
	CNS0095603	Golden flower (diploid) 3	19.542
	CNS0095604	Slightly white alabastrum(tetraploid) 1	0.738
	CNS0095605	Slightly white alabastrum(tetraploid) 2	0.910
	CNS0095606	Slightly white alabastrum(tetraploid) 3	1.317
	CNS0095607	Whole white alabastrum(tetraploid) 1	0.271
	CNS0095608	Whole white alabastrum(tetraploid) 2	0.800
	CNS0095609	Whole white alabastrum(tetraploid) 3	2.822
	CNS0095610	Silvery flower (tetraploid) 1	1.120
	CNS0095611	Silvery flower (tetraploid) 2	0.820
	CNS0095612	Silvery flower (tetraploid) 3	0.644
	CNS0095613	Golden flower (tetraploid) 1	4.744
	CNS0095614	Golden flower (tetraploid) 2	9.081
	CNS0095615	Golden flower (tetraploid) 3	0.431
CRA001975	CRR073297	Stem 1	0.382
	CRR073298	Stem 2	0.743
	CRR073299	Stem 3	0.615
	CRR073300	Leaf 1	0.688
	CRR073301	Leaf 2	2.801
	CRR073302	Leaf 3	0.978
	CRR073303	Juvenile bud 1	0.169
	CRR073304	Juvenile bud 2	0.636
	CRR073305	Juvenile bud 3	0.610
	CRR073306	Third green 1	0.053
	CRR073307	Third green 2	0.000
	CRR073308	Third green 3	0.044
	CRR073309	Second white 1	0.199
	CRR073310	Second white 2	0.000
	CRR073311	Second white 3	0.077
	CRR073312	Silver flowering 1	1.810
	CRR073313	Silver flowering 2	0.786
	CRR073314	Silver flowering 3	2.818
	CRR073315	Gold flowering 1	1.883
	CRR073316	Gold flowering 2	2.241
	CRR073317	Gold flowering 3	2.838
	CRR073318	Tawny withering 1	8.499
	CRR073319	Tawny withering 2	3.881
	CRR073320	Tawny withering 3	2.292