Detail information of GWHGAAZE026689


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrCDP00063.16.1462E-117unnamed protein product [Coffea canephora]
COGYP_289603.12E-32enoyl-CoA hydratase
trEMBLtr|A0A068TXH7|A0A068TXH7_COFCA2E-117Coffea canephora DH200=94 genomic scaffold, scaffold_4 {ECO:0000313|EMBL:CDP00063.1}
TAIR10AT1G65520.18E-76delta(3), delta(2)-enoyl CoA isomerase 1

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene86383778640435+
GWHAAZE00000008mRNA86383778640435+
GWHAAZE00000008exon86383778638738+
GWHAAZE00000008exon86400698640435+
GWHAAZE00000008CDS86383778638738+
GWHAAZE00000008CDS86400698640435+
Transcript Sequence

Network for GWHGAAZE026689

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF00378.21ECH_192033.50E-22
Protein Sequence

Gene family

Gene familysubfamily
----

KEGG pathway

KO Enzyme pathway mapID
K07517ECI1_2 Fatty acid degradation map00071

Gene Ontology

GO term OntologyName
GO:0003824molecular_functioncatalytic activity

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf73.473
SRR3591706second leaf66.124
SRR3591707mature leaf63.659
SRR3591708Shoot apex77.163
SRR3591709Stem73.826
SRR3591710White floral bud64.563
SRR3591711White flower61.314
SRR3591712Green floral bud88.528
SRR3591713Yellow flower58.021
SRP173429 SRR8316895Juvenile bud stage 41.582
SRR8316896Juvenile bud stage 61.946
SRR8316897Juvenile bud stage 24.380
SRR8316894Third green stage 21.622
SRR8316900Third green stage 67.367
SRR8316901Third green stage 73.832
SRR8316898Complete white stage 33.237
SRR8316899Complete white stage 115.387
SRR8316903Complete white stage 44.147
SRR8316902Silver flowering stage26.001
SRR8316904Silver flowering stage28.584
SRR8316905Silver flowering stage16.823
SRR8316906Gold flowering stage 58.436
SRR8316907Gold flowering stage 53.659
SRR8316908Gold flowering stage 59.972
SRP132670SRR6706286Control114.379
SRR6706287Light intensity 50%111.530
SRR6706288Light intensity 20%109.419
CNP0000432CNS0095592Slightly white alabastrum(diploid) 149.858
CNS0095593Slightly white alabastrum(diploid) 259.311
CNS0095594Slightly white alabastrum(diploid) 350.034
CNS0095595Whole white alabastrum(diploid) 252.686
CNS0095596Whole white alabastrum(diploid) 349.311
CNS0095597Whole white alabastrum(diploid) 445.211
CNS0095598Silvery flower (diploied) 170.377
CNS0095599Silvery flower (diploied) 257.801
CNS0095600Silvery flower (diploied) 387.358
CNS0095601Golden flower (diploid) 158.151
CNS0095602Golden flower (diploid) 297.734
CNS0095603Golden flower (diploid) 394.850
CNS0095604Slightly white alabastrum(tetraploid) 158.669
CNS0095605Slightly white alabastrum(tetraploid) 248.699
CNS0095606Slightly white alabastrum(tetraploid) 385.118
CNS0095607Whole white alabastrum(tetraploid) 139.902
CNS0095608Whole white alabastrum(tetraploid) 232.850
CNS0095609Whole white alabastrum(tetraploid) 375.955
CNS0095610Silvery flower (tetraploid) 185.355
CNS0095611Silvery flower (tetraploid) 2115.414
CNS0095612Silvery flower (tetraploid) 388.831
CNS0095613Golden flower (tetraploid) 162.969
CNS0095614Golden flower (tetraploid) 286.811
CNS0095615Golden flower (tetraploid) 373.232
CRA001975CRR073297Stem 165.377
CRR073298Stem 268.503
CRR073299Stem 385.268
CRR073300Leaf 183.246
CRR073301Leaf 282.627
CRR073302Leaf 376.556
CRR073303Juvenile bud 183.663
CRR073304Juvenile bud 284.195
CRR073305Juvenile bud 387.798
CRR073306Third green 145.142
CRR073307Third green 246.845
CRR073308Third green 343.665
CRR073309Second white 144.942
CRR073310Second white 235.469
CRR073311Second white 326.044
CRR073312Silver flowering 128.730
CRR073313Silver flowering 234.281
CRR073314Silver flowering 335.759
CRR073315Gold flowering 148.514
CRR073316Gold flowering 255.883
CRR073317Gold flowering 346.957
CRR073318Tawny withering 168.563
CRR073319Tawny withering 263.000
CRR073320Tawny withering 362.451