Detail information of GWHGAAZE026660


Functional Annotation

DatabaseOrthologsE valueAnnotation
NrXP_010096585.10hypothetical protein L484_025331 [Morus notabilis]
Swissprottr|Q9XE58|SCL14_ARATH0Scarecrow-like protein 14
trEMBLtr|W9RQL5|W9RQL5_9ROSA0Uncharacterized protein {ECO:0000313|EMBL:EXB65253.1}
TAIR10AT2G37650.11E-167GRAS family transcription factor

Location And Transcript Sequence (JBrowse)

ScaffoldTypeStartEndStrand
GWHAAZE00000008gene82760268278245-
GWHAAZE00000008mRNA82760268278245-
GWHAAZE00000008exon82760268278245-
GWHAAZE00000008CDS82760268278245-
Transcript Sequence

Network for GWHGAAZE026660

Network categoryNetworkTop300 PCC genelist
Coexpression PositiveNetworkTop300 PCC genelist
Coexpression NegativeNetworkTop300 PCC genelist


Functional Module

Module IDFunction Annotation


Protein Structure

Pfam accessionPfam nameAlignment startAlignment endE-value
PF03514.15GRAS3667379.50E-115
Protein Sequence

Gene family

Gene familysubfamily
Transcription Factors FamilyGRAS

KEGG pathway

KO Enzyme pathway mapID
--------

Gene Ontology

GO term OntologyName

Expression pattern


Expression pattern detail

SRPSampleDescriptionTPM
SRP075780SRR3591705youngest leaf11.822
SRR3591706second leaf8.934
SRR3591707mature leaf15.611
SRR3591708Shoot apex9.147
SRR3591709Stem13.456
SRR3591710White floral bud14.932
SRR3591711White flower14.773
SRR3591712Green floral bud14.782
SRR3591713Yellow flower12.464
SRP173429 SRR8316895Juvenile bud stage 7.091
SRR8316896Juvenile bud stage 10.604
SRR8316897Juvenile bud stage 4.841
SRR8316894Third green stage 5.274
SRR8316900Third green stage 10.890
SRR8316901Third green stage 10.784
SRR8316898Complete white stage 7.225
SRR8316899Complete white stage 20.813
SRR8316903Complete white stage 12.486
SRR8316902Silver flowering stage8.208
SRR8316904Silver flowering stage11.366
SRR8316905Silver flowering stage5.080
SRR8316906Gold flowering stage 16.805
SRR8316907Gold flowering stage 14.182
SRR8316908Gold flowering stage 17.089
SRP132670SRR6706286Control15.184
SRR6706287Light intensity 50%14.436
SRR6706288Light intensity 20%13.495
CNP0000432CNS0095592Slightly white alabastrum(diploid) 16.127
CNS0095593Slightly white alabastrum(diploid) 25.383
CNS0095594Slightly white alabastrum(diploid) 35.912
CNS0095595Whole white alabastrum(diploid) 25.843
CNS0095596Whole white alabastrum(diploid) 35.476
CNS0095597Whole white alabastrum(diploid) 47.073
CNS0095598Silvery flower (diploied) 117.575
CNS0095599Silvery flower (diploied) 214.829
CNS0095600Silvery flower (diploied) 315.734
CNS0095601Golden flower (diploid) 117.054
CNS0095602Golden flower (diploid) 219.934
CNS0095603Golden flower (diploid) 318.687
CNS0095604Slightly white alabastrum(tetraploid) 17.085
CNS0095605Slightly white alabastrum(tetraploid) 25.515
CNS0095606Slightly white alabastrum(tetraploid) 313.868
CNS0095607Whole white alabastrum(tetraploid) 15.385
CNS0095608Whole white alabastrum(tetraploid) 24.598
CNS0095609Whole white alabastrum(tetraploid) 39.754
CNS0095610Silvery flower (tetraploid) 117.052
CNS0095611Silvery flower (tetraploid) 214.463
CNS0095612Silvery flower (tetraploid) 320.405
CNS0095613Golden flower (tetraploid) 110.398
CNS0095614Golden flower (tetraploid) 214.358
CNS0095615Golden flower (tetraploid) 320.100
CRA001975CRR073297Stem 113.480
CRR073298Stem 214.167
CRR073299Stem 39.857
CRR073300Leaf 116.549
CRR073301Leaf 217.471
CRR073302Leaf 310.301
CRR073303Juvenile bud 111.121
CRR073304Juvenile bud 27.489
CRR073305Juvenile bud 312.757
CRR073306Third green 111.679
CRR073307Third green 27.799
CRR073308Third green 311.339
CRR073309Second white 19.051
CRR073310Second white 215.442
CRR073311Second white 318.655
CRR073312Silver flowering 111.938
CRR073313Silver flowering 29.310
CRR073314Silver flowering 311.770
CRR073315Gold flowering 19.970
CRR073316Gold flowering 216.488
CRR073317Gold flowering 35.840
CRR073318Tawny withering 111.529
CRR073319Tawny withering 29.240
CRR073320Tawny withering 313.964